Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198796
Identifier: 87198796
GI number: 87198796
Start: 821575
End: 822243
Strand: Direct
Name: 87198796
Synonym: Saro_0773
Alternate gene names: NA
Gene position: 821575-822243 (Clockwise)
Preceding gene: 87198785
Following gene: 87198801
Centisome position: 23.07
GC content: 57.55
Gene sequence:
>669_bases GTGCAGGCCATTATCGTCACGATCGTCGGGGCAGGTTGTGCTGGAGCATTGGCAGCTTGTTGCCTTGCCGAATGCTTGCC TTGCGCGAGGATAGTGTTCTTCTGCCGTGACAATCCGAACGGGCACGAACTCGAGCCTGTCGTCCTCGATGCCGTGCCGC CGCTCCTGCGCAATACGATCGATGATGTGGTAGTGCATGAGTGGAGTTCGTTCATAATCGTTTGCGACGGAAAGCAGACG CGGCACTCCGCCCGTATCGCTCTCATCGACCCTATGCAGATTGCCCTCCAACTCGATCGATACGGTGATCGCATAACGGT TCGGACAGACGGCGCTCCTGCACTGCATGAAGGGCTGGATGTTCTGGATCTGACCTCGCTGCACAACCGTGACGGCGCAG GTATGTTGATGGCTTCGAAAGATCTTGCCGAACTCTCTTGTCCGGTACTCGGAGATTTTGATGTCAGTCGCCCCAACGGC GTGGCGCTGCAATATTTTCCCGTAGCTTCCGGACGGGTGCTCACCCGTCAGTTTGCCATCAACGCCGGCTTGGGCGAGGA CGGAGTCAATGGAGGCGCTTCCCTTGCCACCGCAATGCTGGCCGCCTCGGGCAATGCAAATGCCGCAATATCCCGTGTAC ATGAATATGTGCTCAAGCTCAGCCCTTGA
Upstream 100 bases:
>100_bases GGCATACCCCCCGCGCTTGCGTGGCAGCCAACCAGGAAGTGCTCGGCATTTTCACTGGACGCAGTCAGAACCTACGGCGA TCTTGGCCACCCAAAGAGAG
Downstream 100 bases:
>100_bases TGCAGGGCCTTCGCCTGCCAGGCTTGATCCGTGGCAAACCGGTCAAGATGAGGATCGGAGCTCGCAACTTGGCTTCGATT TGCGCGAATTGGGCAGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MQAIIVTIVGAGCAGALAACCLAECLPCARIVFFCRDNPNGHELEPVVLDAVPPLLRNTIDDVVVHEWSSFIIVCDGKQT RHSARIALIDPMQIALQLDRYGDRITVRTDGAPALHEGLDVLDLTSLHNRDGAGMLMASKDLAELSCPVLGDFDVSRPNG VALQYFPVASGRVLTRQFAINAGLGEDGVNGGASLATAMLAASGNANAAISRVHEYVLKLSP
Sequences:
>Translated_222_residues MQAIIVTIVGAGCAGALAACCLAECLPCARIVFFCRDNPNGHELEPVVLDAVPPLLRNTIDDVVVHEWSSFIIVCDGKQT RHSARIALIDPMQIALQLDRYGDRITVRTDGAPALHEGLDVLDLTSLHNRDGAGMLMASKDLAELSCPVLGDFDVSRPNG VALQYFPVASGRVLTRQFAINAGLGEDGVNGGASLATAMLAASGNANAAISRVHEYVLKLSP >Mature_222_residues MQAIIVTIVGAGCAGALAACCLAECLPCARIVFFCRDNPNGHELEPVVLDAVPPLLRNTIDDVVVHEWSSFIIVCDGKQT RHSARIALIDPMQIALQLDRYGDRITVRTDGAPALHEGLDVLDLTSLHNRDGAGMLMASKDLAELSCPVLGDFDVSRPNG VALQYFPVASGRVLTRQFAINAGLGEDGVNGGASLATAMLAASGNANAAISRVHEYVLKLSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23429; Mature: 23429
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAIIVTIVGAGCAGALAACCLAECLPCARIVFFCRDNPNGHELEPVVLDAVPPLLRNTI CCEEEEEEECCCHHHHHHHHHHHHHCCHHEEEEEECCCCCCCCCCEEEECCCCHHHHHHH DDVVVHEWSSFIIVCDGKQTRHSARIALIDPMQIALQLDRYGDRITVRTDGAPALHEGLD HHHHHCCCCCEEEEECCCCCCCCCEEEEECHHHEEEECCCCCCEEEEEECCCCHHHHCCC VLDLTSLHNRDGAGMLMASKDLAELSCPVLGDFDVSRPNGVALQYFPVASGRVLTRQFAI EEEHHHHCCCCCCEEEEECCCHHHHCCCEECCCCCCCCCCEEEEEEECCCCCEEEEEEEE NAGLGEDGVNGGASLATAMLAASGNANAAISRVHEYVLKLSP ECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MQAIIVTIVGAGCAGALAACCLAECLPCARIVFFCRDNPNGHELEPVVLDAVPPLLRNTI CCEEEEEEECCCHHHHHHHHHHHHHCCHHEEEEEECCCCCCCCCCEEEECCCCHHHHHHH DDVVVHEWSSFIIVCDGKQTRHSARIALIDPMQIALQLDRYGDRITVRTDGAPALHEGLD HHHHHCCCCCEEEEECCCCCCCCCEEEEECHHHEEEECCCCCCEEEEEECCCCHHHHCCC VLDLTSLHNRDGAGMLMASKDLAELSCPVLGDFDVSRPNGVALQYFPVASGRVLTRQFAI EEEHHHHCCCCCCEEEEECCCHHHHCCCEECCCCCCCCCCEEEEEEECCCCCEEEEEEEE NAGLGEDGVNGGASLATAMLAASGNANAAISRVHEYVLKLSP ECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA