Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87198796

Identifier: 87198796

GI number: 87198796

Start: 821575

End: 822243

Strand: Direct

Name: 87198796

Synonym: Saro_0773

Alternate gene names: NA

Gene position: 821575-822243 (Clockwise)

Preceding gene: 87198785

Following gene: 87198801

Centisome position: 23.07

GC content: 57.55

Gene sequence:

>669_bases
GTGCAGGCCATTATCGTCACGATCGTCGGGGCAGGTTGTGCTGGAGCATTGGCAGCTTGTTGCCTTGCCGAATGCTTGCC
TTGCGCGAGGATAGTGTTCTTCTGCCGTGACAATCCGAACGGGCACGAACTCGAGCCTGTCGTCCTCGATGCCGTGCCGC
CGCTCCTGCGCAATACGATCGATGATGTGGTAGTGCATGAGTGGAGTTCGTTCATAATCGTTTGCGACGGAAAGCAGACG
CGGCACTCCGCCCGTATCGCTCTCATCGACCCTATGCAGATTGCCCTCCAACTCGATCGATACGGTGATCGCATAACGGT
TCGGACAGACGGCGCTCCTGCACTGCATGAAGGGCTGGATGTTCTGGATCTGACCTCGCTGCACAACCGTGACGGCGCAG
GTATGTTGATGGCTTCGAAAGATCTTGCCGAACTCTCTTGTCCGGTACTCGGAGATTTTGATGTCAGTCGCCCCAACGGC
GTGGCGCTGCAATATTTTCCCGTAGCTTCCGGACGGGTGCTCACCCGTCAGTTTGCCATCAACGCCGGCTTGGGCGAGGA
CGGAGTCAATGGAGGCGCTTCCCTTGCCACCGCAATGCTGGCCGCCTCGGGCAATGCAAATGCCGCAATATCCCGTGTAC
ATGAATATGTGCTCAAGCTCAGCCCTTGA

Upstream 100 bases:

>100_bases
GGCATACCCCCCGCGCTTGCGTGGCAGCCAACCAGGAAGTGCTCGGCATTTTCACTGGACGCAGTCAGAACCTACGGCGA
TCTTGGCCACCCAAAGAGAG

Downstream 100 bases:

>100_bases
TGCAGGGCCTTCGCCTGCCAGGCTTGATCCGTGGCAAACCGGTCAAGATGAGGATCGGAGCTCGCAACTTGGCTTCGATT
TGCGCGAATTGGGCAGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MQAIIVTIVGAGCAGALAACCLAECLPCARIVFFCRDNPNGHELEPVVLDAVPPLLRNTIDDVVVHEWSSFIIVCDGKQT
RHSARIALIDPMQIALQLDRYGDRITVRTDGAPALHEGLDVLDLTSLHNRDGAGMLMASKDLAELSCPVLGDFDVSRPNG
VALQYFPVASGRVLTRQFAINAGLGEDGVNGGASLATAMLAASGNANAAISRVHEYVLKLSP

Sequences:

>Translated_222_residues
MQAIIVTIVGAGCAGALAACCLAECLPCARIVFFCRDNPNGHELEPVVLDAVPPLLRNTIDDVVVHEWSSFIIVCDGKQT
RHSARIALIDPMQIALQLDRYGDRITVRTDGAPALHEGLDVLDLTSLHNRDGAGMLMASKDLAELSCPVLGDFDVSRPNG
VALQYFPVASGRVLTRQFAINAGLGEDGVNGGASLATAMLAASGNANAAISRVHEYVLKLSP
>Mature_222_residues
MQAIIVTIVGAGCAGALAACCLAECLPCARIVFFCRDNPNGHELEPVVLDAVPPLLRNTIDDVVVHEWSSFIIVCDGKQT
RHSARIALIDPMQIALQLDRYGDRITVRTDGAPALHEGLDVLDLTSLHNRDGAGMLMASKDLAELSCPVLGDFDVSRPNG
VALQYFPVASGRVLTRQFAINAGLGEDGVNGGASLATAMLAASGNANAAISRVHEYVLKLSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23429; Mature: 23429

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAIIVTIVGAGCAGALAACCLAECLPCARIVFFCRDNPNGHELEPVVLDAVPPLLRNTI
CCEEEEEEECCCHHHHHHHHHHHHHCCHHEEEEEECCCCCCCCCCEEEECCCCHHHHHHH
DDVVVHEWSSFIIVCDGKQTRHSARIALIDPMQIALQLDRYGDRITVRTDGAPALHEGLD
HHHHHCCCCCEEEEECCCCCCCCCEEEEECHHHEEEECCCCCCEEEEEECCCCHHHHCCC
VLDLTSLHNRDGAGMLMASKDLAELSCPVLGDFDVSRPNGVALQYFPVASGRVLTRQFAI
EEEHHHHCCCCCCEEEEECCCHHHHCCCEECCCCCCCCCCEEEEEEECCCCCEEEEEEEE
NAGLGEDGVNGGASLATAMLAASGNANAAISRVHEYVLKLSP
ECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQAIIVTIVGAGCAGALAACCLAECLPCARIVFFCRDNPNGHELEPVVLDAVPPLLRNTI
CCEEEEEEECCCHHHHHHHHHHHHHCCHHEEEEEECCCCCCCCCCEEEECCCCHHHHHHH
DDVVVHEWSSFIIVCDGKQTRHSARIALIDPMQIALQLDRYGDRITVRTDGAPALHEGLD
HHHHHCCCCCEEEEECCCCCCCCCEEEEECHHHEEEECCCCCCEEEEEECCCCHHHHCCC
VLDLTSLHNRDGAGMLMASKDLAELSCPVLGDFDVSRPNGVALQYFPVASGRVLTRQFAI
EEEHHHHCCCCCCEEEEECCCHHHHCCCEECCCCCCCCCCEEEEEEECCCCCEEEEEEEE
NAGLGEDGVNGGASLATAMLAASGNANAAISRVHEYVLKLSP
ECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA