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The map label for this gene is cirA [C]

Identifier: 87198802

GI number: 87198802

Start: 827253

End: 829526

Strand: Direct

Name: cirA [C]

Synonym: Saro_0779

Alternate gene names: 87198802

Gene position: 827253-829526 (Clockwise)

Preceding gene: 87198801

Following gene: 87198803

Centisome position: 23.23

GC content: 63.1

Gene sequence:

>2274_bases
ATGCTACCTGCCAGCAAAAACCGGGAGGGAACGGCCATGAATACCACTTCCATATTGCTCGCCACGTCGGCCCTGGCGCT
CTCCGCGCCAGCCTTTGCGCAAACGGCCGGGCAGGCCGATGAGGCAAAAGCGGCCGATCGCGGCGTCGGCGACATCATCG
TCACCGCCAACCGCATCGAGACGACCGCGCAGGACACGCCGATCGCGCTCAACGTCTATACCGGCGCGGACCTTGCCCAG
AGCGGCATCAATTCGGTCCGCGATCTTTCCGCGATCGACCCCAGCCTCAACGTCTCGAGTTCGAACAGTTCAGCCTATGT
CGCGGTGCGCGGCATCGCCTCGACCGACGTCACCGAACTGGGCGATCCCTCAGTCCCCGTCTCGCGCGATGGCTTCTTCA
CCAATCGCGCCTATTCGATCAACACCTCGATGTACGACGTCGCTCGCGTCGAAGTGCTGAAGGGCCCGCAAGGCACACTT
CAGGGCCGCAACTCGACCGGCGGCCTCGTCAGCATCATCACCAACCGGCCCAAGTTCAAGAACGAGGTTTCGGCCTCGTT
CGAATACGGCAACTACGACACGACCAACGCCGACGCCGCGGTCAACCTCGCCCTGTCGGACAATTTCGCGCTGCGCGCTT
CGGGCGTGTTCCTCAAGCATGACGGCTACCGCCGCCAGGTCGGCGTGATGAAGTCGGCCGACAACGAGGATTTCAAGTCC
GGCCGCATCCAGGCCCGCTTCGCGAAGGACGGTCTCGACCTGTGGGTGTCCTACCAGCGCGATGACCGCGACACCGATGG
CGAGGCCGTACTCAAGAACACTCTCGGCGCGCCCCAGCCCAGCTTTGATCCGCTGCCGACCTTCCGCAGCGATGCCCCGA
CGCGCACCGTGCTCAAGGGCGAACGCATCCGCTGGGAGGCCAGCTACAGCGGCTTGGGCAACCTCAACCTGATCTACTCG
GGTGGGTGGGACAAGCAGCAGTTTGATCTCACGCTCGACGCCACCGGTCCAAACTACCCGGCGAACCGCCAGTACCTCAA
CACCCAGGCGCCGACGACTTGGAACCACGAAGTCCGCATCAGCAACGAGAAGACCGGCAAGCTCTTCATCCAAGCCGGCT
ACTTCCGCTTCACTGAAGACAACGCGCTCGCTGCCGGGCTTTACAACCGCGAGATGACCGGCCTCTTCGCGCCGGGCCAG
CCGCTTTCGTTCGCGCCCAACGCCGACCAGTCGTTCCGCTACGGCCTCGCTTTCGACTTCGCGATCAAGACCAAGTCCGA
CGCCATCTTCGCCCAGGCCGACTATGACCTGACCGAACAGGTCCAGCTTTCGGCCGGCGCGCGTTATACCTGGGACAACA
AGTCGCGCACCGGCAATTCCCGTCTGGTCCTGCCGGCGCTCGCCTTCCCGCTCTGCAGCAACAGCTTTCCGGCGCCGGAC
TCTTGCCCGCCGTTCCCCATCGTCAATTCAGGCAATGGCGAGACCAGGGAGCGCAAGCCCACCTGGCACCTTGGCCTCAA
CTGGCGCCCGGAATCGGGCCGCCTGATCTATGCCAAGTACGATCGCGGCTACAAATCGGGCGGCTTCAACTCGAACGGCT
CGGTCGCCGCAACGCCCTATGGCGCGGAACAGGTCGACGCCTTCGAGATCGGCACCAAGAACACGCTGATGGGCAATGCC
CTTCAGCTCAACTTCGCGGCCTTCTACTTCAACTACAAGGGCTACCAGGCGCAGCAGAGCACCTGCCCGACCTGCTCGAC
CGGCGTGTTCAACGTCGGCAGCGCCCGTGTGCTCGGCCTCGAAGGCCAGCTCAACGCCCGCGTTGCCGAGAACACCAAGC
TCTATCTCAACAGCACGCTGCTCGACACCAAGTTCGGCGACAACATCATCGTCACCAACGGCAACAACCAGAACGTCGAC
ATCAGCAAGAACCAGCTACCCAACGCTCCGCACTTCACAGCCTCGATGGGCTTCGAACAGGGCGTGCCGCTGGGCGATCA
CCTGCTCTCGTTCCGCGCGGACGGCAAGTACTCGTCGAGCTTCTACTTCTCGGCGTTCAACTTGTCGCAGATCCGCTCGC
CATCGTACTTCCTCGGCAACCTCTCGGCCTCGATCGAGCCGAACGCGGGTGGCTGGAAGCTGCAGGCCTATGTCCGCAAC
GTCTTCAACAAGAACGTGCTGTCCTTTGCCGAGCAGAACTTCAACGGCTTCAGCGACAACTACCAGTTCCAGCCGCCCCG
CACCTACGGCGTGCGAGCCAGCGTGAACTTCTGA

Upstream 100 bases:

>100_bases
CCGCGCTCTTGCGTTCAATTGCAATCAAAGCAGTGATTAGATTTACGCTTGACGCTGACCCCTCCCAAATTTAATCACCG
ATCAAATGGGCCGGAGCGAA

Downstream 100 bases:

>100_bases
TCTGACCCAATGTGATCTGACGGCGGATCAAGACGCATAGCGGCGGGAGAGGATGCCCTTGGCTTCCTCTTCCGCCATAC
AGGAGCAAGACATGCCCGGT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Domain Protein; NB-Dependent Receptor Plug; NB-Dependent Receptor-Like Protein; NB Dependent Receptor; Nb-Dependent Receptor; Outer Membrane Protein; NB Dependent Receptor Protein; Outer Membrane Receptor Family Protein; NB-Dependent Siderophore Receptor; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Protein; Outer Membrane Protein nB-Dependent Receptor; Helix-Turn-Helix AraC Type; NB-Dependent Receptor Plug Domain Protein; NB-Dependent Siderophore Receptor Protein

Number of amino acids: Translated: 757; Mature: 757

Protein sequence:

>757_residues
MLPASKNREGTAMNTTSILLATSALALSAPAFAQTAGQADEAKAADRGVGDIIVTANRIETTAQDTPIALNVYTGADLAQ
SGINSVRDLSAIDPSLNVSSSNSSAYVAVRGIASTDVTELGDPSVPVSRDGFFTNRAYSINTSMYDVARVEVLKGPQGTL
QGRNSTGGLVSIITNRPKFKNEVSASFEYGNYDTTNADAAVNLALSDNFALRASGVFLKHDGYRRQVGVMKSADNEDFKS
GRIQARFAKDGLDLWVSYQRDDRDTDGEAVLKNTLGAPQPSFDPLPTFRSDAPTRTVLKGERIRWEASYSGLGNLNLIYS
GGWDKQQFDLTLDATGPNYPANRQYLNTQAPTTWNHEVRISNEKTGKLFIQAGYFRFTEDNALAAGLYNREMTGLFAPGQ
PLSFAPNADQSFRYGLAFDFAIKTKSDAIFAQADYDLTEQVQLSAGARYTWDNKSRTGNSRLVLPALAFPLCSNSFPAPD
SCPPFPIVNSGNGETRERKPTWHLGLNWRPESGRLIYAKYDRGYKSGGFNSNGSVAATPYGAEQVDAFEIGTKNTLMGNA
LQLNFAAFYFNYKGYQAQQSTCPTCSTGVFNVGSARVLGLEGQLNARVAENTKLYLNSTLLDTKFGDNIIVTNGNNQNVD
ISKNQLPNAPHFTASMGFEQGVPLGDHLLSFRADGKYSSSFYFSAFNLSQIRSPSYFLGNLSASIEPNAGGWKLQAYVRN
VFNKNVLSFAEQNFNGFSDNYQFQPPRTYGVRASVNF

Sequences:

>Translated_757_residues
MLPASKNREGTAMNTTSILLATSALALSAPAFAQTAGQADEAKAADRGVGDIIVTANRIETTAQDTPIALNVYTGADLAQ
SGINSVRDLSAIDPSLNVSSSNSSAYVAVRGIASTDVTELGDPSVPVSRDGFFTNRAYSINTSMYDVARVEVLKGPQGTL
QGRNSTGGLVSIITNRPKFKNEVSASFEYGNYDTTNADAAVNLALSDNFALRASGVFLKHDGYRRQVGVMKSADNEDFKS
GRIQARFAKDGLDLWVSYQRDDRDTDGEAVLKNTLGAPQPSFDPLPTFRSDAPTRTVLKGERIRWEASYSGLGNLNLIYS
GGWDKQQFDLTLDATGPNYPANRQYLNTQAPTTWNHEVRISNEKTGKLFIQAGYFRFTEDNALAAGLYNREMTGLFAPGQ
PLSFAPNADQSFRYGLAFDFAIKTKSDAIFAQADYDLTEQVQLSAGARYTWDNKSRTGNSRLVLPALAFPLCSNSFPAPD
SCPPFPIVNSGNGETRERKPTWHLGLNWRPESGRLIYAKYDRGYKSGGFNSNGSVAATPYGAEQVDAFEIGTKNTLMGNA
LQLNFAAFYFNYKGYQAQQSTCPTCSTGVFNVGSARVLGLEGQLNARVAENTKLYLNSTLLDTKFGDNIIVTNGNNQNVD
ISKNQLPNAPHFTASMGFEQGVPLGDHLLSFRADGKYSSSFYFSAFNLSQIRSPSYFLGNLSASIEPNAGGWKLQAYVRN
VFNKNVLSFAEQNFNGFSDNYQFQPPRTYGVRASVNF
>Mature_757_residues
MLPASKNREGTAMNTTSILLATSALALSAPAFAQTAGQADEAKAADRGVGDIIVTANRIETTAQDTPIALNVYTGADLAQ
SGINSVRDLSAIDPSLNVSSSNSSAYVAVRGIASTDVTELGDPSVPVSRDGFFTNRAYSINTSMYDVARVEVLKGPQGTL
QGRNSTGGLVSIITNRPKFKNEVSASFEYGNYDTTNADAAVNLALSDNFALRASGVFLKHDGYRRQVGVMKSADNEDFKS
GRIQARFAKDGLDLWVSYQRDDRDTDGEAVLKNTLGAPQPSFDPLPTFRSDAPTRTVLKGERIRWEASYSGLGNLNLIYS
GGWDKQQFDLTLDATGPNYPANRQYLNTQAPTTWNHEVRISNEKTGKLFIQAGYFRFTEDNALAAGLYNREMTGLFAPGQ
PLSFAPNADQSFRYGLAFDFAIKTKSDAIFAQADYDLTEQVQLSAGARYTWDNKSRTGNSRLVLPALAFPLCSNSFPAPD
SCPPFPIVNSGNGETRERKPTWHLGLNWRPESGRLIYAKYDRGYKSGGFNSNGSVAATPYGAEQVDAFEIGTKNTLMGNA
LQLNFAAFYFNYKGYQAQQSTCPTCSTGVFNVGSARVLGLEGQLNARVAENTKLYLNSTLLDTKFGDNIIVTNGNNQNVD
ISKNQLPNAPHFTASMGFEQGVPLGDHLLSFRADGKYSSSFYFSAFNLSQIRSPSYFLGNLSASIEPNAGGWKLQAYVRN
VFNKNVLSFAEQNFNGFSDNYQFQPPRTYGVRASVNF

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788478, Length=159, Percent_Identity=26.4150943396226, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82431; Mature: 82431

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPASKNREGTAMNTTSILLATSALALSAPAFAQTAGQADEAKAADRGVGDIIVTANRIE
CCCCCCCCCCCEECCEEEEEEEHHHHHCCCHHHHHCCCCHHHHHHHCCCCEEEEEECCEE
TTAQDTPIALNVYTGADLAQSGINSVRDLSAIDPSLNVSSSNSSAYVAVRGIASTDVTEL
CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEEEECCCCCHHHC
GDPSVPVSRDGFFTNRAYSINTSMYDVARVEVLKGPQGTLQGRNSTGGLVSIITNRPKFK
CCCCCCCCCCCCEECCEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCC
NEVSASFEYGNYDTTNADAAVNLALSDNFALRASGVFLKHDGYRRQVGVMKSADNEDFKS
CCCCEEEECCCCCCCCCCEEEEEEECCCEEEEECCEEEECCCCEEEECEEECCCCCCCCC
GRIQARFAKDGLDLWVSYQRDDRDTDGEAVLKNTLGAPQPSFDPLPTFRSDAPTRTVLKG
CEEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECC
ERIRWEASYSGLGNLNLIYSGGWDKQQFDLTLDATGPNYPANRQYLNTQAPTTWNHEVRI
CEEEEEECCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCCCCEEEE
SNEKTGKLFIQAGYFRFTEDNALAAGLYNREMTGLFAPGQPLSFAPNADQSFRYGLAFDF
CCCCCCEEEEEECEEEEECCCEEEEEECCCCCCEEECCCCCCCCCCCCCCCEEEEEEEEE
AIKTKSDAIFAQADYDLTEQVQLSAGARYTWDNKSRTGNSRLVLPALAFPLCSNSFPAPD
EEECCCCEEEEECCCCCCCEEEECCCCEEEECCCCCCCCCEEEHHHHHHHHHCCCCCCCC
SCPPFPIVNSGNGETRERKPTWHLGLNWRPESGRLIYAKYDRGYKSGGFNSNGSVAATPY
CCCCCCEEECCCCCCCCCCCEEEECEEEECCCCEEEEEECCCCCCCCCCCCCCCEEECCC
GAEQVDAFEIGTKNTLMGNALQLNFAAFYFNYKGYQAQQSTCPTCSTGVFNVGSARVLGL
CCCCCEEEECCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEECCCEEEEEE
EGQLNARVAENTKLYLNSTLLDTKFGDNIIVTNGNNQNVDISKNQLPNAPHFTASMGFEQ
CCCCCCEEECCCEEEEEEEEEECCCCCEEEEECCCCCCEEECHHCCCCCCCEEEECCCCC
GVPLGDHLLSFRADGKYSSSFYFSAFNLSQIRSPSYFLGNLSASIEPNAGGWKLQAYVRN
CCCCHHHHEEEECCCCCCCEEEEEEECHHHHCCCCEEEEEEEEEECCCCCCEEHHHHHHH
VFNKNVLSFAEQNFNGFSDNYQFQPPRTYGVRASVNF
HHHHHHHHHHHHCCCCCCCCCEECCCCCEEEEEEECC
>Mature Secondary Structure
MLPASKNREGTAMNTTSILLATSALALSAPAFAQTAGQADEAKAADRGVGDIIVTANRIE
CCCCCCCCCCCEECCEEEEEEEHHHHHCCCHHHHHCCCCHHHHHHHCCCCEEEEEECCEE
TTAQDTPIALNVYTGADLAQSGINSVRDLSAIDPSLNVSSSNSSAYVAVRGIASTDVTEL
CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEEEECCCCCHHHC
GDPSVPVSRDGFFTNRAYSINTSMYDVARVEVLKGPQGTLQGRNSTGGLVSIITNRPKFK
CCCCCCCCCCCCEECCEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCC
NEVSASFEYGNYDTTNADAAVNLALSDNFALRASGVFLKHDGYRRQVGVMKSADNEDFKS
CCCCEEEECCCCCCCCCCEEEEEEECCCEEEEECCEEEECCCCEEEECEEECCCCCCCCC
GRIQARFAKDGLDLWVSYQRDDRDTDGEAVLKNTLGAPQPSFDPLPTFRSDAPTRTVLKG
CEEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECC
ERIRWEASYSGLGNLNLIYSGGWDKQQFDLTLDATGPNYPANRQYLNTQAPTTWNHEVRI
CEEEEEECCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCCCCEEEE
SNEKTGKLFIQAGYFRFTEDNALAAGLYNREMTGLFAPGQPLSFAPNADQSFRYGLAFDF
CCCCCCEEEEEECEEEEECCCEEEEEECCCCCCEEECCCCCCCCCCCCCCCEEEEEEEEE
AIKTKSDAIFAQADYDLTEQVQLSAGARYTWDNKSRTGNSRLVLPALAFPLCSNSFPAPD
EEECCCCEEEEECCCCCCCEEEECCCCEEEECCCCCCCCCEEEHHHHHHHHHCCCCCCCC
SCPPFPIVNSGNGETRERKPTWHLGLNWRPESGRLIYAKYDRGYKSGGFNSNGSVAATPY
CCCCCCEEECCCCCCCCCCCEEEECEEEECCCCEEEEEECCCCCCCCCCCCCCCEEECCC
GAEQVDAFEIGTKNTLMGNALQLNFAAFYFNYKGYQAQQSTCPTCSTGVFNVGSARVLGL
CCCCCEEEECCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEECCCEEEEEE
EGQLNARVAENTKLYLNSTLLDTKFGDNIIVTNGNNQNVDISKNQLPNAPHFTASMGFEQ
CCCCCCEEECCCEEEEEEEEEECCCCCEEEEECCCCCCEEECHHCCCCCCCEEEECCCCC
GVPLGDHLLSFRADGKYSSSFYFSAFNLSQIRSPSYFLGNLSASIEPNAGGWKLQAYVRN
CCCCHHHHEEEECCCCCCCEEEEEEECHHHHCCCCEEEEEEEEEECCCCCCEEHHHHHHH
VFNKNVLSFAEQNFNGFSDNYQFQPPRTYGVRASVNF
HHHHHHHHHHHHCCCCCCCCCEECCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA