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The map label for this gene is cirA [C]

Identifier: 87198778

GI number: 87198778

Start: 800381

End: 802510

Strand: Direct

Name: cirA [C]

Synonym: Saro_0754

Alternate gene names: 87198778

Gene position: 800381-802510 (Clockwise)

Preceding gene: 87198777

Following gene: 87198780

Centisome position: 22.47

GC content: 63.62

Gene sequence:

>2130_bases
ATGAAGCGCTTCTCTCTCCTTGCAGGTTGTTCGCTCGCGGTGGCGATTGCATGTTCCGTACCCGCACTGGCCGATGAGGC
AGGATCGACGGCCGATACGCAGCAAGGCGGATCGCATGCGCAGCCTTCCGACCAGATCGTGGTGACTGCAGCCTTCCAGC
GCGACAGGCTCGATATCCTCTCTGGTGTCTCGGTCCTCCAGGGGGAGGCGTTGACCCAGGCGATCCGCCCGACGCTGGGC
GAAACTCTCGATCGCACGCCTGGCGTTTCGGCCACCTCGTTCGGTCCCAACGCGTCGCGTCCTGTCCTGCGTGGTCTCCA
GGGCGAGCGTGTGCGGATCCTCACCGACGGCATAGGTGCATTCGATGTGTCGAACACCAGCGCCGACCACGCGGTCGTGA
TCGATCCGCTACTGGCAGAGCGGATCGAAGTGCTGCGCGGACCCGCGACATTGCTGTTCGGTTCGTCGGCAATCGGCGGC
GTGGTCAACGTGATCGACAAGCGCATCCCGCGCACGCTGCCGGACGAGCCCGTCCATGCGGACATGATCGCGACGTATGG
CTCCGCAGCAGACGAACGCTCGATTGGCGGCGCGGTCGACGTGCCGTTGGCAGGCAAGTTCGTCGTCCATGCCGACGGCA
GCTACCTCAAGACAGGTGACCTGCGCGTGGGCGGAAATCTTCTTGCGGCTCCGGCCCGGGCCACTGCACTTGCCAATGCC
GGGTCGGAAGACGATGACCAGCTTGCCGAGGGCATCAGCTTTGCAGGCAACGCTGCGCTCAAGGGGCGCCTGTTGAACTC
TGCGGCAGAAACGTGGACCGCAGGCGTGGGCGCCGCACTTGTGACCGACACCGGCAATCTCGGCATCTCCTACAGCCACT
ATGACAGCCTTTACGGCGTGCCGGTCCGTTATGCGATCCGCCCAGGCGAGGAGCAGGAGGCGCCTCGGCTGGACGTCGCC
CAGAATCGCTTCGACATGCGCGCCGAGGTTGAGACCGGCGGTGGTCTTCTCAAGTCCATCCGTGCCCGCGCTGGCTACGC
AAGCTACCGTCACTATGAACTCGAGGCCGACGGCAGCATTGGCACCGCCTTCTACAACAAGGGCCTCGAAGGCCGCCTTG
AACTGGTTCAGGCCGATCGCGGCGCATGGAAGGGGGCAAGCGGCGTCCAATACTTTTCGCGCGACTTCAACGTCGTCGGG
GATGAGGCCTTCCTGCCCAAGAACTCGACCCAGCAGTTCGGCCTGTTCACGCTTCAGCAGCTCGATCTTGGCCAACTGAA
GTTCGAAGCCGGCGGCCGGTACGAACACACCGTCCTCGAAGCGCATCCCACGCCTGAACAGCCGCAGTTCTTCGAAGGCA
AGCGCACCTTCGGCACCTTCTCCGGGTCGGCTGGGGCGTCTTATGGCTTCGCGAAGGATTGGCGCTTCGGCATCAATCTT
TCGCGCACGGTGCGCGCGCCATCTGCGGAGGAACTTTTCGCCAATGGCCCGCATGCCGGCACGCAGGCCTACGAGGTCGG
CGATCCCGACTTCAAGACAGAACGCGCAACGGGCATCGAAGCCGTGCTGCGGGGCAAGTCAGGTGGCTTCTCCATCGAAG
CCTCGGCCTATCACAACTGGTTCAGCAATTTCATCTACGAGGGCATGACGGGTGAGGTCGAGGATGGCCTGCCGGTGTTC
CAGTTCAGCCAGGCCAAGGCGCGCTATTATGGTTTCGAACTCCAGACGACGGCCGCTCTCGGCAAGATTGGCGGCATGGA
ACTGGTTGCCGATGGCGTTGCCGACTACGTTCACGCAACGATCGACGGCGTCGGCCCCGCGCCGCGAATTCCTCCGCTCC
GTCTCCTCGGCGGCCTCGCACTGAACGGAGGGAAAGTCGACTTGCGCGGTGAGGTCGAATGGAACGACAGCCAGGACCGC
CTCGCCGCCTTCGAAACGGCGACGGGGAGCTTTACGTTGGTCAATGCGGAAATCAACTATCGCCCCTGGGGCAACGCGCG
TCCATTGTCCTTCGCGCTTTCGGCAAACAACATCTTCGATGTCGATGCCCGCCGCCACGCATCCGTTCTCAAGGATTTCG
CCCCCCTCGCCGGCCGCGACATTCGTGTCACGGCGCGTGCGAGCTTTTGA

Upstream 100 bases:

>100_bases
TCTTGTAACATGACTTGAGGCGGCTTAAGGAGCTGATCGCGGCAAACGCGCGCCGGCCGATGGTCGGTGAAAACGGGTCC
GATCCGAAAAGGGCATTTCG

Downstream 100 bases:

>100_bases
CGTTTTCGGCGGCGAGGCGGCCGGGGCGGGGCATGGCGCATGTCGCGTGACCGGCCTGGCGCTTCGCCGCCGCCCGACCG
GGGCAGAGATCTATGTCAGG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 709; Mature: 709

Protein sequence:

>709_residues
MKRFSLLAGCSLAVAIACSVPALADEAGSTADTQQGGSHAQPSDQIVVTAAFQRDRLDILSGVSVLQGEALTQAIRPTLG
ETLDRTPGVSATSFGPNASRPVLRGLQGERVRILTDGIGAFDVSNTSADHAVVIDPLLAERIEVLRGPATLLFGSSAIGG
VVNVIDKRIPRTLPDEPVHADMIATYGSAADERSIGGAVDVPLAGKFVVHADGSYLKTGDLRVGGNLLAAPARATALANA
GSEDDDQLAEGISFAGNAALKGRLLNSAAETWTAGVGAALVTDTGNLGISYSHYDSLYGVPVRYAIRPGEEQEAPRLDVA
QNRFDMRAEVETGGGLLKSIRARAGYASYRHYELEADGSIGTAFYNKGLEGRLELVQADRGAWKGASGVQYFSRDFNVVG
DEAFLPKNSTQQFGLFTLQQLDLGQLKFEAGGRYEHTVLEAHPTPEQPQFFEGKRTFGTFSGSAGASYGFAKDWRFGINL
SRTVRAPSAEELFANGPHAGTQAYEVGDPDFKTERATGIEAVLRGKSGGFSIEASAYHNWFSNFIYEGMTGEVEDGLPVF
QFSQAKARYYGFELQTTAALGKIGGMELVADGVADYVHATIDGVGPAPRIPPLRLLGGLALNGGKVDLRGEVEWNDSQDR
LAAFETATGSFTLVNAEINYRPWGNARPLSFALSANNIFDVDARRHASVLKDFAPLAGRDIRVTARASF

Sequences:

>Translated_709_residues
MKRFSLLAGCSLAVAIACSVPALADEAGSTADTQQGGSHAQPSDQIVVTAAFQRDRLDILSGVSVLQGEALTQAIRPTLG
ETLDRTPGVSATSFGPNASRPVLRGLQGERVRILTDGIGAFDVSNTSADHAVVIDPLLAERIEVLRGPATLLFGSSAIGG
VVNVIDKRIPRTLPDEPVHADMIATYGSAADERSIGGAVDVPLAGKFVVHADGSYLKTGDLRVGGNLLAAPARATALANA
GSEDDDQLAEGISFAGNAALKGRLLNSAAETWTAGVGAALVTDTGNLGISYSHYDSLYGVPVRYAIRPGEEQEAPRLDVA
QNRFDMRAEVETGGGLLKSIRARAGYASYRHYELEADGSIGTAFYNKGLEGRLELVQADRGAWKGASGVQYFSRDFNVVG
DEAFLPKNSTQQFGLFTLQQLDLGQLKFEAGGRYEHTVLEAHPTPEQPQFFEGKRTFGTFSGSAGASYGFAKDWRFGINL
SRTVRAPSAEELFANGPHAGTQAYEVGDPDFKTERATGIEAVLRGKSGGFSIEASAYHNWFSNFIYEGMTGEVEDGLPVF
QFSQAKARYYGFELQTTAALGKIGGMELVADGVADYVHATIDGVGPAPRIPPLRLLGGLALNGGKVDLRGEVEWNDSQDR
LAAFETATGSFTLVNAEINYRPWGNARPLSFALSANNIFDVDARRHASVLKDFAPLAGRDIRVTARASF
>Mature_709_residues
MKRFSLLAGCSLAVAIACSVPALADEAGSTADTQQGGSHAQPSDQIVVTAAFQRDRLDILSGVSVLQGEALTQAIRPTLG
ETLDRTPGVSATSFGPNASRPVLRGLQGERVRILTDGIGAFDVSNTSADHAVVIDPLLAERIEVLRGPATLLFGSSAIGG
VVNVIDKRIPRTLPDEPVHADMIATYGSAADERSIGGAVDVPLAGKFVVHADGSYLKTGDLRVGGNLLAAPARATALANA
GSEDDDQLAEGISFAGNAALKGRLLNSAAETWTAGVGAALVTDTGNLGISYSHYDSLYGVPVRYAIRPGEEQEAPRLDVA
QNRFDMRAEVETGGGLLKSIRARAGYASYRHYELEADGSIGTAFYNKGLEGRLELVQADRGAWKGASGVQYFSRDFNVVG
DEAFLPKNSTQQFGLFTLQQLDLGQLKFEAGGRYEHTVLEAHPTPEQPQFFEGKRTFGTFSGSAGASYGFAKDWRFGINL
SRTVRAPSAEELFANGPHAGTQAYEVGDPDFKTERATGIEAVLRGKSGGFSIEASAYHNWFSNFIYEGMTGEVEDGLPVF
QFSQAKARYYGFELQTTAALGKIGGMELVADGVADYVHATIDGVGPAPRIPPLRLLGGLALNGGKVDLRGEVEWNDSQDR
LAAFETATGSFTLVNAEINYRPWGNARPLSFALSANNIFDVDARRHASVLKDFAPLAGRDIRVTARASF

Specific function: Probable receptor, tonB-dependent [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1788478, Length=174, Percent_Identity=31.6091954022989, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1790405, Length=224, Percent_Identity=29.0178571428571, Blast_Score=70, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 75307; Mature: 75307

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFSLLAGCSLAVAIACSVPALADEAGSTADTQQGGSHAQPSDQIVVTAAFQRDRLDIL
CCCCHHHHCCCEEEHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHH
SGVSVLQGEALTQAIRPTLGETLDRTPGVSATSFGPNASRPVLRGLQGERVRILTDGIGA
HCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCE
FDVSNTSADHAVVIDPLLAERIEVLRGPATLLFGSSAIGGVVNVIDKRIPRTLPDEPVHA
EECCCCCCCCEEEECHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCH
DMIATYGSAADERSIGGAVDVPLAGKFVVHADGSYLKTGDLRVGGNLLAAPARATALANA
HHHHHCCCCCCCCCCCCEECCCCCCEEEEEECCCEEEECCEEECCCEEECCCHHHHHHCC
GSEDDDQLAEGISFAGNAALKGRLLNSAAETWTAGVGAALVTDTGNLGISYSHYDSLYGV
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCCCC
PVRYAIRPGEEQEAPRLDVAQNRFDMRAEVETGGGLLKSIRARAGYASYRHYELEADGSI
CEEEEECCCCCCCCCCCCHHHCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEEEECCCCE
GTAFYNKGLEGRLELVQADRGAWKGASGVQYFSRDFNVVGDEAFLPKNSTQQFGLFTLQQ
EHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCEECCCCCCCCCCEEEEEC
LDLGQLKFEAGGRYEHTVLEAHPTPEQPQFFEGKRTFGTFSGSAGASYGFAKDWRFGINL
CCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEECCCE
SRTVRAPSAEELFANGPHAGTQAYEVGDPDFKTERATGIEAVLRGKSGGFSIEASAYHNW
EEEECCCCHHHHHCCCCCCCCCEEECCCCCCCCHHHCCHHHHEECCCCCEEEEHHHHHHH
FSNFIYEGMTGEVEDGLPVFQFSQAKARYYGFELQTTAALGKIGGMELVADGVADYVHAT
HHHHHHCCCCCCCCCCCCEEEECCCHHHEECEEEEHHHHHHCCCCHHHHHHHHHHHHHHH
IDGVGPAPRIPPLRLLGGLALNGGKVDLRGEVEWNDSQDRLAAFETATGSFTLVNAEINY
HCCCCCCCCCCHHHHHCCEEECCCEEEEEEEECCCCCHHHEEEEEECCCCEEEEEEEEEE
RPWGNARPLSFALSANNIFDVDARRHASVLKDFAPLAGRDIRVTARASF
CCCCCCCCEEEEEECCCEEECCHHHHHHHHHHHHHCCCCCEEEEEECCC
>Mature Secondary Structure
MKRFSLLAGCSLAVAIACSVPALADEAGSTADTQQGGSHAQPSDQIVVTAAFQRDRLDIL
CCCCHHHHCCCEEEHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHH
SGVSVLQGEALTQAIRPTLGETLDRTPGVSATSFGPNASRPVLRGLQGERVRILTDGIGA
HCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCE
FDVSNTSADHAVVIDPLLAERIEVLRGPATLLFGSSAIGGVVNVIDKRIPRTLPDEPVHA
EECCCCCCCCEEEECHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCH
DMIATYGSAADERSIGGAVDVPLAGKFVVHADGSYLKTGDLRVGGNLLAAPARATALANA
HHHHHCCCCCCCCCCCCEECCCCCCEEEEEECCCEEEECCEEECCCEEECCCHHHHHHCC
GSEDDDQLAEGISFAGNAALKGRLLNSAAETWTAGVGAALVTDTGNLGISYSHYDSLYGV
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCCCC
PVRYAIRPGEEQEAPRLDVAQNRFDMRAEVETGGGLLKSIRARAGYASYRHYELEADGSI
CEEEEECCCCCCCCCCCCHHHCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEEEECCCCE
GTAFYNKGLEGRLELVQADRGAWKGASGVQYFSRDFNVVGDEAFLPKNSTQQFGLFTLQQ
EHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCEECCCCCCCCCCEEEEEC
LDLGQLKFEAGGRYEHTVLEAHPTPEQPQFFEGKRTFGTFSGSAGASYGFAKDWRFGINL
CCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEECCCE
SRTVRAPSAEELFANGPHAGTQAYEVGDPDFKTERATGIEAVLRGKSGGFSIEASAYHNW
EEEECCCCHHHHHCCCCCCCCCEEECCCCCCCCHHHCCHHHHEECCCCCEEEEHHHHHHH
FSNFIYEGMTGEVEDGLPVFQFSQAKARYYGFELQTTAALGKIGGMELVADGVADYVHAT
HHHHHHCCCCCCCCCCCCEEEECCCHHHEECEEEEHHHHHHCCCCHHHHHHHHHHHHHHH
IDGVGPAPRIPPLRLLGGLALNGGKVDLRGEVEWNDSQDRLAAFETATGSFTLVNAEINY
HCCCCCCCCCCHHHHHCCEEECCCEEEEEEEECCCCCHHHEEEEEECCCCEEEEEEEEEE
RPWGNARPLSFALSANNIFDVDARRHASVLKDFAPLAGRDIRVTARASF
CCCCCCCCEEEEEECCCEEECCHHHHHHHHHHHHHCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]