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The map label for this gene is xylB [H]

Identifier: 87198780

GI number: 87198780

Start: 803799

End: 805238

Strand: Direct

Name: xylB [H]

Synonym: Saro_0756

Alternate gene names: 87198780

Gene position: 803799-805238 (Clockwise)

Preceding gene: 87198778

Following gene: 87198781

Centisome position: 22.57

GC content: 69.51

Gene sequence:

>1440_bases
GTGTATCTTGGAATCGATATTGGCACGTCCGGCGTGAAGGCCGTGCTGGTGGAAGAACGCGGCGCCATCGCGGCTCAGGG
GACGGCAGCGCATGATGTCAGCCGACCCTACCAGATGTGGTCGGAGCAGGACCCCGCCGCGTGGGTGCGCGCAACCGAGG
AGGCGGTGCTCGCGCTGCCGTCGACCTTGCGCGGAGCGGTAAAGGGTGTCGGCCTTGCGGGGCAAATGCACGGGGCGACC
CTGCTCGGCGCGGACGACAGGCCATTGCGCCCGGCGATCCTGTGGAACGACGGTCGAAGCTTTGCCGAATGTGTCGAACT
GGAGGCCGCGGAACCCCACACCCGCGCGATCACGGGTAATATCGCCATGCCCGGCTTCACCGCGCCCAAGCTTGCCTGGG
TGCGCAAGCACGAGCCCGAAATCTTCGCGCAAGTGCGGACGGTGCTGCTGCCGAAGGACTATGTGCGCCTTGTCCTCACG
GGCGACAAGGCTTCCGACATGGCCGACAGCGCCGGGACCCTGTGGCTCGACGGCGCGGCCCGTAACTGGTCCGATGCCAT
GCTCGCGGCCACTGGTCTTGCTCGCTCGATGATGCCGAAGCTCTACGAGGGCAGCGCGGCGACCGGGGTGCTTTCGGCCG
AGGTCGCGGCGCGCTGGGGGATGGGCCGAGTGCCGGTCGCTGCGGGCGGCGGCGACAACGCGGCTGGCGCGGCTGGCGTC
GGTGTGGTCGGCGATGGCGATGCGTTGCTCTCGCTTGGCACTTCGGGGGTGATCTTCGTGGCGACGCGCGACTTCCGGCC
CAATCCGGCCCGCGCGGTCCATGCCTTCTGCCACTGCCTTCCGGATCTCTGGCACCAGATGAGCGTCCACCTTTCCGCAG
CAAGCTGCCTCGATTGGGCGGCGGCGGCCATGGGCGTCGACGTGCCCGCACTGCTGGCGCTGGCTGAACAGTCCGGACCG
GCAAGCGGGCCGGAACTGTTCCTTCCCTACCTTTCGGGCGAGCGCACGCCGCACAACGATCCGGCAGTGCGCGCCGCTTT
CTTGCGCATGGGCAACGAAACCGGTCCTGGCCAGCTTGCCGCAGCCGTTCTTGAAGGCGTCGCCTTCGCCCATGCCGACG
GACTCGACGCGCTGCGCGAGGCTGGCACCGACGTCGCGGCGCTCTCGGTCATCGGCGGCGGCGCGCGGTCGCGCCACTGG
GGGCGCATCCTCGCCTCGGTCCTCGATGTCCGGCTGGATTACCTCGAAGGCGGGGAAGTGGGGCCTGCCCTCGGCGCGGC
CAAGCTTGCCCAGATCGCCGTCACCGGGGCGGACCCGGCCGAAGTCTGCCAGCGTCCGCCGCTTGCCCATTCCATCGAAC
CCGACCGGGACCTGGCGGAACGCCTGGCCCCGAAGCTTGCCGCATTCCGCGCCGCCTATGGCGCCGTTCGCCATCTCTGA

Upstream 100 bases:

>100_bases
CCGGGCGGTCTACGCCAGCCATTCCAGACTTGCAAATGTAGTTATGATAACGCTACCTTATGCAGCAAGAAGGTCCACCG
GGCCATGAGAGGATCAAGGC

Downstream 100 bases:

>100_bases
AAGGAAGAACGATGTCTGCCGATTACTTCGCCGATTTCCAGACGGTCCGCTACGAAGGGCCGGACAGCGACAATGACTTT
GCCTATCGCTGGTACGACAA

Product: xylulokinase

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MYLGIDIGTSGVKAVLVEERGAIAAQGTAAHDVSRPYQMWSEQDPAAWVRATEEAVLALPSTLRGAVKGVGLAGQMHGAT
LLGADDRPLRPAILWNDGRSFAECVELEAAEPHTRAITGNIAMPGFTAPKLAWVRKHEPEIFAQVRTVLLPKDYVRLVLT
GDKASDMADSAGTLWLDGAARNWSDAMLAATGLARSMMPKLYEGSAATGVLSAEVAARWGMGRVPVAAGGGDNAAGAAGV
GVVGDGDALLSLGTSGVIFVATRDFRPNPARAVHAFCHCLPDLWHQMSVHLSAASCLDWAAAAMGVDVPALLALAEQSGP
ASGPELFLPYLSGERTPHNDPAVRAAFLRMGNETGPGQLAAAVLEGVAFAHADGLDALREAGTDVAALSVIGGGARSRHW
GRILASVLDVRLDYLEGGEVGPALGAAKLAQIAVTGADPAEVCQRPPLAHSIEPDRDLAERLAPKLAAFRAAYGAVRHL

Sequences:

>Translated_479_residues
MYLGIDIGTSGVKAVLVEERGAIAAQGTAAHDVSRPYQMWSEQDPAAWVRATEEAVLALPSTLRGAVKGVGLAGQMHGAT
LLGADDRPLRPAILWNDGRSFAECVELEAAEPHTRAITGNIAMPGFTAPKLAWVRKHEPEIFAQVRTVLLPKDYVRLVLT
GDKASDMADSAGTLWLDGAARNWSDAMLAATGLARSMMPKLYEGSAATGVLSAEVAARWGMGRVPVAAGGGDNAAGAAGV
GVVGDGDALLSLGTSGVIFVATRDFRPNPARAVHAFCHCLPDLWHQMSVHLSAASCLDWAAAAMGVDVPALLALAEQSGP
ASGPELFLPYLSGERTPHNDPAVRAAFLRMGNETGPGQLAAAVLEGVAFAHADGLDALREAGTDVAALSVIGGGARSRHW
GRILASVLDVRLDYLEGGEVGPALGAAKLAQIAVTGADPAEVCQRPPLAHSIEPDRDLAERLAPKLAAFRAAYGAVRHL
>Mature_479_residues
MYLGIDIGTSGVKAVLVEERGAIAAQGTAAHDVSRPYQMWSEQDPAAWVRATEEAVLALPSTLRGAVKGVGLAGQMHGAT
LLGADDRPLRPAILWNDGRSFAECVELEAAEPHTRAITGNIAMPGFTAPKLAWVRKHEPEIFAQVRTVLLPKDYVRLVLT
GDKASDMADSAGTLWLDGAARNWSDAMLAATGLARSMMPKLYEGSAATGVLSAEVAARWGMGRVPVAAGGGDNAAGAAGV
GVVGDGDALLSLGTSGVIFVATRDFRPNPARAVHAFCHCLPDLWHQMSVHLSAASCLDWAAAAMGVDVPALLALAEQSGP
ASGPELFLPYLSGERTPHNDPAVRAAFLRMGNETGPGQLAAAVLEGVAFAHADGLDALREAGTDVAALSVIGGGARSRHW
GRILASVLDVRLDYLEGGEVGPALGAAKLAQIAVTGADPAEVCQRPPLAHSIEPDRDLAERLAPKLAAFRAAYGAVRHL

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI18860918, Length=203, Percent_Identity=29.064039408867, Blast_Score=69, Evalue=7e-12,
Organism=Escherichia coli, GI1789987, Length=480, Percent_Identity=56.0416666666667, Blast_Score=493, Evalue=1e-140,
Organism=Escherichia coli, GI1790005, Length=498, Percent_Identity=27.3092369477912, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1790361, Length=484, Percent_Identity=22.9338842975207, Blast_Score=95, Evalue=9e-21,
Organism=Escherichia coli, GI1789168, Length=435, Percent_Identity=23.9080459770115, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1787789, Length=386, Percent_Identity=24.6113989637306, Blast_Score=83, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 49709; Mature: 49709

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS00933 FGGY_KINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLGIDIGTSGVKAVLVEERGAIAAQGTAAHDVSRPYQMWSEQDPAAWVRATEEAVLALP
CEEEEEECCCCEEEEEEECCCCEEECCCCHHHCCCHHHHHCCCCCHHHHHHHHHHHHHCC
STLRGAVKGVGLAGQMHGATLLGADDRPLRPAILWNDGRSFAECVELEAAEPHTRAITGN
HHHHHHHHCCCCCCCCCCEEEECCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCEEEECC
IAMPGFTAPKLAWVRKHEPEIFAQVRTVLLPKDYVRLVLTGDKASDMADSAGTLWLDGAA
EECCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCCEEEECCCC
RNWSDAMLAATGLARSMMPKLYEGSAATGVLSAEVAARWGMGRVPVAAGGGDNAAGAAGV
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC
GVVGDGDALLSLGTSGVIFVATRDFRPNPARAVHAFCHCLPDLWHQMSVHLSAASCLDWA
CEECCCCHHEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAMGVDVPALLALAEQSGPASGPELFLPYLSGERTPHNDPAVRAAFLRMGNETGPGQLA
HHHHCCCHHHHHHHHHCCCCCCCCEEEEEHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHH
AAVLEGVAFAHADGLDALREAGTDVAALSVIGGGARSRHWGRILASVLDVRLDYLEGGEV
HHHHHHHHHHCCCCHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC
GPALGAAKLAQIAVTGADPAEVCQRPPLAHSIEPDRDLAERLAPKLAAFRAAYGAVRHL
CCHHHHHHHHEEEECCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYLGIDIGTSGVKAVLVEERGAIAAQGTAAHDVSRPYQMWSEQDPAAWVRATEEAVLALP
CEEEEEECCCCEEEEEEECCCCEEECCCCHHHCCCHHHHHCCCCCHHHHHHHHHHHHHCC
STLRGAVKGVGLAGQMHGATLLGADDRPLRPAILWNDGRSFAECVELEAAEPHTRAITGN
HHHHHHHHCCCCCCCCCCEEEECCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCEEEECC
IAMPGFTAPKLAWVRKHEPEIFAQVRTVLLPKDYVRLVLTGDKASDMADSAGTLWLDGAA
EECCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCCEEEECCCC
RNWSDAMLAATGLARSMMPKLYEGSAATGVLSAEVAARWGMGRVPVAAGGGDNAAGAAGV
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC
GVVGDGDALLSLGTSGVIFVATRDFRPNPARAVHAFCHCLPDLWHQMSVHLSAASCLDWA
CEECCCCHHEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAMGVDVPALLALAEQSGPASGPELFLPYLSGERTPHNDPAVRAAFLRMGNETGPGQLA
HHHHCCCHHHHHHHHHCCCCCCCCEEEEEHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHH
AAVLEGVAFAHADGLDALREAGTDVAALSVIGGGARSRHWGRILASVLDVRLDYLEGGEV
HHHHHHHHHHCCCCHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC
GPALGAAKLAQIAVTGADPAEVCQRPPLAHSIEPDRDLAERLAPKLAAFRAAYGAVRHL
CCHHHHHHHHEEEECCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 6320721; 8041620; 9278503 [H]