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The map label for this gene is bexD [H]

Identifier: 87198777

GI number: 87198777

Start: 799043

End: 800221

Strand: Direct

Name: bexD [H]

Synonym: Saro_0753

Alternate gene names: 87198777

Gene position: 799043-800221 (Clockwise)

Preceding gene: 87198776

Following gene: 87198778

Centisome position: 22.44

GC content: 64.8

Gene sequence:

>1179_bases
ATGACCATGTGCTCCGGCCTCTCCCGCTGGTCCGTTCTTTTGGCCGCTGGCTCCACCTTGCTAGCGGCACTGTCCGGATG
CAGCTCGCTCGGTTCTTCCGGCCCAAGCGCGCGGAAGATCAATTCCGTAGAGAATGCGCAGGAACACGGCATTGCCGTCG
TCACGCTCGACGGCGCTCAGCTTTCCAGGCTCGACGCGCTTGCCGCCAGCCAGTCGTTTTTGGACGTTCTCGGCGATTTT
CCTGCCGATCCCACGGTTATCGGTCCGGGCGATTCCGTCGATGTCTCGATGTGGGAGGCACCGCCGGCGGTTCTGTTCGG
CACCGCCGTCCCGATGAGCCGCGACGGCGGCGGATCGCTGGTTCAGGGTGTGAACTTGCCGCAACAGATGGTCGCGGCGG
ATGGCCGGATCACCGTCCCGTTCGTCGGGCCTGTTGCAGTGGCCGGGCGCCAGACCCGCGATGTCGAGCGGGAGATCGCC
GCGCGCCTTCGCGCCAAGGCGCACGATCCGCAGGTTGTCGTGAGGCTTGCCCAGAACGAGACGCGCAACGTCACCGTCAT
GGGCGAGGTCGCGGCAAGCCGCCGCATCGCGCTCACTCCACGGGGCGAAAGGCTGCTCGATGCGCTCGCTTCGGCGGGTG
GAAGCCGGCAACCCGTGGGCAAGACCATGGTTCAGATCACGCGCGGGACGACCACCGCCAGCATGCCGCTCGACAAGGTC
ATCCGCGATTCTCGCCAGAACGTGCGGCTGCGCCCTGGCGACGTCGTGACGGCCCTGTACCAGCCCTTCAGCTTTACTGC
GCTGGGTGCAAGCAATCTCAACGCCGAGATTCCGTTCGAGGCTACCGGCATCACGCTGGCCCAGGCGCTCGGCAGGGTAG
GCGGGCTTCGGGATGACCGCGCGGACGTGCGCGGTGTTTTCATTTTTCGCTACGAAAGGCCCGAGGCGCTGGATGGCGCT
GCAAGGGTCGGACCGTTAACGCGAGAGGGAAGGGTGCCGGTCGTCTATCGCCTCGACATGAGCGAACCGGCAGGGCTGTT
CCTCGCCCGCAACTTTTTCATCGACGACAAGGATATCGTCTACGTCTCCAACGCGCCCTTGGCCGACTTGCAGAAGTTCA
TGAACATGGTTTCCTCGGCGACGTTCTCCGTCATCGGCATTACCAACGCCGTGCAGTGA

Upstream 100 bases:

>100_bases
ATGTCCATGCGTGGGCGCGAAGTGGCTGCCGGCTTCAGTGCCGAAGCCTATCGGGGGCGGCTCGCGGACTTCTATGCCAA
GTTCTGATGGTGAAATGACG

Downstream 100 bases:

>100_bases
TGGGCCGTCAAGACAGGCCCTCGCAAACGCAGCGCCGGCTGCTGTTAATGGATATGTTATCTTGTAACATGACTTGAGGC
GGCTTAAGGAGCTGATCGCG

Product: polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MTMCSGLSRWSVLLAAGSTLLAALSGCSSLGSSGPSARKINSVENAQEHGIAVVTLDGAQLSRLDALAASQSFLDVLGDF
PADPTVIGPGDSVDVSMWEAPPAVLFGTAVPMSRDGGGSLVQGVNLPQQMVAADGRITVPFVGPVAVAGRQTRDVEREIA
ARLRAKAHDPQVVVRLAQNETRNVTVMGEVAASRRIALTPRGERLLDALASAGGSRQPVGKTMVQITRGTTTASMPLDKV
IRDSRQNVRLRPGDVVTALYQPFSFTALGASNLNAEIPFEATGITLAQALGRVGGLRDDRADVRGVFIFRYERPEALDGA
ARVGPLTREGRVPVVYRLDMSEPAGLFLARNFFIDDKDIVYVSNAPLADLQKFMNMVSSATFSVIGITNAVQ

Sequences:

>Translated_392_residues
MTMCSGLSRWSVLLAAGSTLLAALSGCSSLGSSGPSARKINSVENAQEHGIAVVTLDGAQLSRLDALAASQSFLDVLGDF
PADPTVIGPGDSVDVSMWEAPPAVLFGTAVPMSRDGGGSLVQGVNLPQQMVAADGRITVPFVGPVAVAGRQTRDVEREIA
ARLRAKAHDPQVVVRLAQNETRNVTVMGEVAASRRIALTPRGERLLDALASAGGSRQPVGKTMVQITRGTTTASMPLDKV
IRDSRQNVRLRPGDVVTALYQPFSFTALGASNLNAEIPFEATGITLAQALGRVGGLRDDRADVRGVFIFRYERPEALDGA
ARVGPLTREGRVPVVYRLDMSEPAGLFLARNFFIDDKDIVYVSNAPLADLQKFMNMVSSATFSVIGITNAVQ
>Mature_391_residues
TMCSGLSRWSVLLAAGSTLLAALSGCSSLGSSGPSARKINSVENAQEHGIAVVTLDGAQLSRLDALAASQSFLDVLGDFP
ADPTVIGPGDSVDVSMWEAPPAVLFGTAVPMSRDGGGSLVQGVNLPQQMVAADGRITVPFVGPVAVAGRQTRDVEREIAA
RLRAKAHDPQVVVRLAQNETRNVTVMGEVAASRRIALTPRGERLLDALASAGGSRQPVGKTMVQITRGTTTASMPLDKVI
RDSRQNVRLRPGDVVTALYQPFSFTALGASNLNAEIPFEATGITLAQALGRVGGLRDDRADVRGVFIFRYERPEALDGAA
RVGPLTREGRVPVVYRLDMSEPAGLFLARNFFIDDKDIVYVSNAPLADLQKFMNMVSSATFSVIGITNAVQ

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the BexA, BexB and BexC proteins. May function as a membrane anchor for capsular polysaccharides. Possible porin properties [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=297, Percent_Identity=27.9461279461279, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1788376, Length=297, Percent_Identity=27.2727272727273, Blast_Score=113, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715 [H]

Pfam domain/function: PF02563 Poly_export [H]

EC number: NA

Molecular weight: Translated: 41427; Mature: 41296

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMCSGLSRWSVLLAAGSTLLAALSGCSSLGSSGPSARKINSVENAQEHGIAVVTLDGAQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEECCHH
LSRLDALAASQSFLDVLGDFPADPTVIGPGDSVDVSMWEAPPAVLFGTAVPMSRDGGGSL
HHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEECCCCCEEEECCCCCCCCCCCCE
VQGVNLPQQMVAADGRITVPFVGPVAVAGRQTRDVEREIAARLRAKAHDPQVVVRLAQNE
EECCCCCHHHHHCCCEEEEEECCCHHHCCCCHHHHHHHHHHHHHHCCCCHHEEEEEECCC
TRNVTVMGEVAASRRIALTPRGERLLDALASAGGSRQPVGKTMVQITRGTTTASMPLDKV
CCCEEEEEECCCCCEEEECCCHHHHHHHHHHCCCCCCCCCHHHEEEECCCCCCCCCHHHH
IRDSRQNVRLRPGDVVTALYQPFSFTALGASNLNAEIPFEATGITLAQALGRVGGLRDDR
HHCCCCCCEECCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
ADVRGVFIFRYERPEALDGAARVGPLTREGRVPVVYRLDMSEPAGLFLARNFFIDDKDIV
CCCCEEEEEEECCCCHHCCHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCEE
YVSNAPLADLQKFMNMVSSATFSVIGITNAVQ
EECCCCHHHHHHHHHHHHHCCEEEEEECCCCC
>Mature Secondary Structure 
TMCSGLSRWSVLLAAGSTLLAALSGCSSLGSSGPSARKINSVENAQEHGIAVVTLDGAQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEECCHH
LSRLDALAASQSFLDVLGDFPADPTVIGPGDSVDVSMWEAPPAVLFGTAVPMSRDGGGSL
HHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEECCCCCEEEECCCCCCCCCCCCE
VQGVNLPQQMVAADGRITVPFVGPVAVAGRQTRDVEREIAARLRAKAHDPQVVVRLAQNE
EECCCCCHHHHHCCCEEEEEECCCHHHCCCCHHHHHHHHHHHHHHCCCCHHEEEEEECCC
TRNVTVMGEVAASRRIALTPRGERLLDALASAGGSRQPVGKTMVQITRGTTTASMPLDKV
CCCEEEEEECCCCCEEEECCCHHHHHHHHHHCCCCCCCCCHHHEEEECCCCCCCCCHHHH
IRDSRQNVRLRPGDVVTALYQPFSFTALGASNLNAEIPFEATGITLAQALGRVGGLRDDR
HHCCCCCCEECCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
ADVRGVFIFRYERPEALDGAARVGPLTREGRVPVVYRLDMSEPAGLFLARNFFIDDKDIV
CCCCEEEEEEECCCCHHCCHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCEE
YVSNAPLADLQKFMNMVSSATFSVIGITNAVQ
EECCCCHHHHHHHHHHHHHCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2082145 [H]