Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198764
Identifier: 87198764
GI number: 87198764
Start: 782384
End: 784855
Strand: Direct
Name: 87198764
Synonym: Saro_0740
Alternate gene names: NA
Gene position: 782384-784855 (Clockwise)
Preceding gene: 87198763
Following gene: 87198765
Centisome position: 21.97
GC content: 64.81
Gene sequence:
>2472_bases ATGCTGCGGCGCGGTGCAACCCTATCGCCGGACGTGCGTTTGTTCATTGATCGTACAGGTTCCGGCACCGGCCGACCTGC TCAGCATTCGGAACACCACAAAGCCATGAAATCCAGCAGCACGACCTATCGACATGCCGACGCCGTGCCTCCCGGTTCGG TTCTTTCGTTCCTGCGTCGCGCCGACGCCGCGGTGTGTCGCCGCATTGCCCTGATCGGCGGCTTCCGTCCCCGCAAATGC GGGATCGCGACCTTCACGACCGACATCTACGAACAACTCGGCGCCCACCATCCCGACGTGGCGGTGGATCTTCATGTGGT GGACGATCCGCTCGCGGTTCATGTCTACGAAGGCGTGCGAGGCATCATCAGGTCGGACCGCCCCGAGGACTATCGCGCCG CTGCGCGGCGGATCAACGAGGATGCGGTGGATGCGGTCTGGCTGCAGCACGAGTACGGCATCTTCGGCGGCGAGGCCGGG GAAATGGTACTCGAACTTGTCGACCGCATAGCTGCACCGCTGATCGTGACGCTGCACACCGTTCTGGCAGAACCCTCGGA CAAGCAGCGGGCGGTGCTGGAACACCTGCTACGTCGCGCATCCGGCGTGATGGTCATGTCCGATCATTCCCGGAAGCTGC TTCGGCAGATCTATCGCGTTGACGCCGACCGTATTGCCGTCATCGCGCATGGCGCGCCGGACCGCCCGTTTGGCCGTGAG GAGGAGCACAAGCGTCAGTTCGGGCTGGAAGGGCGTCGCGTGATGATGACGTTCGGCCTTCTCGGTCCGGGCAAGGGGCT CGAAACCGTCATCGAGGCGCTTCCCGCAATTGCCGAGAACCACCCCGACGTGGTCTATCGCATCGTCGGCGCGACGCATC CCAACCTTGTCGCTCGCGACGGCGAGCGTTATCGCGAAGGCCTCATGGAACTTGCCGAACGGCTGGGCGTTGCGGCGAAT GTGCAGTGGGATAATCGCTTCCTTGATACCGAAGAGCTGCTCGACCAGCTCGAGGCCTGCGACATCTACCTCACGCCTTA CCCCAACATGCAGCAGTCGACGTCAGGCACGCTGAGCTATGCCGTTGCGCTCGGCAAGGCCGTGGTCTCGACGCCGTATG TCCATGCGCGGGAGCTGCTTGCCGAAGGCGTCGGCGTTCTGGTCGAGCCTCGCCAGGCGGATGTCATCGCGGCCGCCGTC AACCGGCTGCTAGACGATCCGCAGGAACTGCGCGCGGTCAAGCGGCGGGCATGGGAAAAGGGCCGAGAGACGATCTGGCC TTGTTTTGCGAGGGGCGCGCGCGATCTGGTCGAGAGCGTAGCGGTGCAGCCGTGTCGTCCCATGCCTCTGCTTGCGACGC CTGGCTTCGCGGGCGTTGCCGCGATGGGCGATGCGACCGGCATCATGCAGCATTCCATCGGAACCGTGCCCGACCGCCGA CATGGCTATTGCCTGGACGACAACGTCCGCGCCCTGATGCTCATGGGCGTTGCCGATGCCGTGCCGGTTGCCGAGCGCCA GCGCTGGGCCATGATCTATGCCTCGTTCATCCAGCACGCCTGGAATCCCGACCGGCAGGCCTTCCGCAATTTCATGAACT TCGACCGCACTTGGTGCGAGGACGTCGGCTCGGACGACAGCAACGGGCGCACCGTCTGGGCCCTGGGCGGGGCAATGCGC AACGCACCGGACGAGGGCTTGAGGGCATGGGCGAGCCAGTGGTTCGACATCGCGCTTGCCCCGGTGGCTGCGATGGAGCC GCCCCGTACGGTCGCCTTCGTCATGCTCGGCTGCGCGCAGGCCTTGAAGGCCAATCCCGACCACGCTGCCGCACGGACCA GTCTGGAGCATGGCGCTAACCTGCTTCACGCCCTTCTCGCGTCGTCGCGCAGGCCCGACTGGGCGTGGTTCGAGGCAGTG CTGGGCTATGACAACCCACGCCTGTCGCAGGCTCTGATCGAGGCGGGGACGTTGCTTGGCCGTGAGGACTGGCTGGAAAG CGGCTTGTCCAGCCTGCGCTTCATTTCGTGCCAGCAGGTGTCGGCACAAGGTCACTTTCGCCCCGTGGGCTCCGAAACCT TCGGCCGGGCTTACGAGAACCTGCCCTTCGACCAGCAACCTCTGGAAGCATGGGCTGCGATCGACGCTGCGACAGCAGCG TTCGAGGCGACGGGCGATGAGAACTGGCTGCATCATGCCGAAACGGCCTATCGCTGGTTCTTCGGCGGCAACGATCGCGG GGTTGTGCTTGCAGACATCGCGAGCGGGCGATGCCGGGACGGCGTCACGCCGCAGGGCGTGAATCTCAATTGCGGTGCGG AGTCCATCCTCGCGTTCCAGCTGGCGCATTATTCGATCTGTGCCGTGGCCGGCCGGACTGCCGAAGGGCGTGCAATTCTG GCTGGGCGCACCAGCGAGAAGATTGCGGAACGCATCAATAGCAGGGGTGCTCAACAGCTTGCGGGTGCTTGA
Upstream 100 bases:
>100_bases ATGTTGCGGTGCGGCAAGTCACTGTGGGTCAAGAAGAACTGATCTCCTGTCAGGCCTTCTGCCGGCCTTTGAGACGAATG GTGGCGCGACTCGGGACGGA
Downstream 100 bases:
>100_bases TCAAAGACTTCACGCCGACCCTTCGCGGGTCGTCCTCAGACCGTTCCACCTTGGTTGGCAGGGGCCGGGCGGGCACGGCG CGCGTGCGGCAAAGCTCGTG
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Mannosyltransferase; Glycosyltransferase Group I; Group 1 Glycosyl Transferase; Glycosyl Transferase; Phosphatidylinositol Alpha-Mannosyltransferase; Lipopolysaccharide Transferase Family Protein; Glycosyl Transferase Group 1 Protein
Number of amino acids: Translated: 823; Mature: 823
Protein sequence:
>823_residues MLRRGATLSPDVRLFIDRTGSGTGRPAQHSEHHKAMKSSSTTYRHADAVPPGSVLSFLRRADAAVCRRIALIGGFRPRKC GIATFTTDIYEQLGAHHPDVAVDLHVVDDPLAVHVYEGVRGIIRSDRPEDYRAAARRINEDAVDAVWLQHEYGIFGGEAG EMVLELVDRIAAPLIVTLHTVLAEPSDKQRAVLEHLLRRASGVMVMSDHSRKLLRQIYRVDADRIAVIAHGAPDRPFGRE EEHKRQFGLEGRRVMMTFGLLGPGKGLETVIEALPAIAENHPDVVYRIVGATHPNLVARDGERYREGLMELAERLGVAAN VQWDNRFLDTEELLDQLEACDIYLTPYPNMQQSTSGTLSYAVALGKAVVSTPYVHARELLAEGVGVLVEPRQADVIAAAV NRLLDDPQELRAVKRRAWEKGRETIWPCFARGARDLVESVAVQPCRPMPLLATPGFAGVAAMGDATGIMQHSIGTVPDRR HGYCLDDNVRALMLMGVADAVPVAERQRWAMIYASFIQHAWNPDRQAFRNFMNFDRTWCEDVGSDDSNGRTVWALGGAMR NAPDEGLRAWASQWFDIALAPVAAMEPPRTVAFVMLGCAQALKANPDHAAARTSLEHGANLLHALLASSRRPDWAWFEAV LGYDNPRLSQALIEAGTLLGREDWLESGLSSLRFISCQQVSAQGHFRPVGSETFGRAYENLPFDQQPLEAWAAIDAATAA FEATGDENWLHHAETAYRWFFGGNDRGVVLADIASGRCRDGVTPQGVNLNCGAESILAFQLAHYSICAVAGRTAEGRAIL AGRTSEKIAERINSRGAQQLAGA
Sequences:
>Translated_823_residues MLRRGATLSPDVRLFIDRTGSGTGRPAQHSEHHKAMKSSSTTYRHADAVPPGSVLSFLRRADAAVCRRIALIGGFRPRKC GIATFTTDIYEQLGAHHPDVAVDLHVVDDPLAVHVYEGVRGIIRSDRPEDYRAAARRINEDAVDAVWLQHEYGIFGGEAG EMVLELVDRIAAPLIVTLHTVLAEPSDKQRAVLEHLLRRASGVMVMSDHSRKLLRQIYRVDADRIAVIAHGAPDRPFGRE EEHKRQFGLEGRRVMMTFGLLGPGKGLETVIEALPAIAENHPDVVYRIVGATHPNLVARDGERYREGLMELAERLGVAAN VQWDNRFLDTEELLDQLEACDIYLTPYPNMQQSTSGTLSYAVALGKAVVSTPYVHARELLAEGVGVLVEPRQADVIAAAV NRLLDDPQELRAVKRRAWEKGRETIWPCFARGARDLVESVAVQPCRPMPLLATPGFAGVAAMGDATGIMQHSIGTVPDRR HGYCLDDNVRALMLMGVADAVPVAERQRWAMIYASFIQHAWNPDRQAFRNFMNFDRTWCEDVGSDDSNGRTVWALGGAMR NAPDEGLRAWASQWFDIALAPVAAMEPPRTVAFVMLGCAQALKANPDHAAARTSLEHGANLLHALLASSRRPDWAWFEAV LGYDNPRLSQALIEAGTLLGREDWLESGLSSLRFISCQQVSAQGHFRPVGSETFGRAYENLPFDQQPLEAWAAIDAATAA FEATGDENWLHHAETAYRWFFGGNDRGVVLADIASGRCRDGVTPQGVNLNCGAESILAFQLAHYSICAVAGRTAEGRAIL AGRTSEKIAERINSRGAQQLAGA >Mature_823_residues MLRRGATLSPDVRLFIDRTGSGTGRPAQHSEHHKAMKSSSTTYRHADAVPPGSVLSFLRRADAAVCRRIALIGGFRPRKC GIATFTTDIYEQLGAHHPDVAVDLHVVDDPLAVHVYEGVRGIIRSDRPEDYRAAARRINEDAVDAVWLQHEYGIFGGEAG EMVLELVDRIAAPLIVTLHTVLAEPSDKQRAVLEHLLRRASGVMVMSDHSRKLLRQIYRVDADRIAVIAHGAPDRPFGRE EEHKRQFGLEGRRVMMTFGLLGPGKGLETVIEALPAIAENHPDVVYRIVGATHPNLVARDGERYREGLMELAERLGVAAN VQWDNRFLDTEELLDQLEACDIYLTPYPNMQQSTSGTLSYAVALGKAVVSTPYVHARELLAEGVGVLVEPRQADVIAAAV NRLLDDPQELRAVKRRAWEKGRETIWPCFARGARDLVESVAVQPCRPMPLLATPGFAGVAAMGDATGIMQHSIGTVPDRR HGYCLDDNVRALMLMGVADAVPVAERQRWAMIYASFIQHAWNPDRQAFRNFMNFDRTWCEDVGSDDSNGRTVWALGGAMR NAPDEGLRAWASQWFDIALAPVAAMEPPRTVAFVMLGCAQALKANPDHAAARTSLEHGANLLHALLASSRRPDWAWFEAV LGYDNPRLSQALIEAGTLLGREDWLESGLSSLRFISCQQVSAQGHFRPVGSETFGRAYENLPFDQQPLEAWAAIDAATAA FEATGDENWLHHAETAYRWFFGGNDRGVVLADIASGRCRDGVTPQGVNLNCGAESILAFQLAHYSICAVAGRTAEGRAIL AGRTSEKIAERINSRGAQQLAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90307; Mature: 90307
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRGATLSPDVRLFIDRTGSGTGRPAQHSEHHKAMKSSSTTYRHADAVPPGSVLSFLRR CCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEECCCCCHHHHHHHHHH ADAAVCRRIALIGGFRPRKCGIATFTTDIYEQLGAHHPDVAVDLHVVDDPLAVHVYEGVR HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEHHHHHHH GIIRSDRPEDYRAAARRINEDAVDAVWLQHEYGIFGGEAGEMVLELVDRIAAPLIVTLHT HHHCCCCCHHHHHHHHHCCHHHHHHHHEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VLAEPSDKQRAVLEHLLRRASGVMVMSDHSRKLLRQIYRVDADRIAVIAHGAPDRPFGRE HHCCCCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC EEHKRQFGLEGRRVMMTFGLLGPGKGLETVIEALPAIAENHPDVVYRIVGATHPNLVARD HHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC GERYREGLMELAERLGVAANVQWDNRFLDTEELLDQLEACDIYLTPYPNMQQSTSGTLSY CHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHCEEEECCCCCCCCCCCCHHHH AVALGKAVVSTPYVHARELLAEGVGVLVEPRQADVIAAAVNRLLDDPQELRAVKRRAWEK HHHHHHHHHHCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH GRETIWPCFARGARDLVESVAVQPCRPMPLLATPGFAGVAAMGDATGIMQHSIGTVPDRR CCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHCCHHHHHHHHCCCCCCCC HGYCLDDNVRALMLMGVADAVPVAERQRWAMIYASFIQHAWNPDRQAFRNFMNFDRTWCE CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHH DVGSDDSNGRTVWALGGAMRNAPDEGLRAWASQWFDIALAPVAAMEPPRTVAFVMLGCAQ HCCCCCCCCCEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH ALKANPDHAAARTSLEHGANLLHALLASSRRPDWAWFEAVLGYDNPRLSQALIEAGTLLG HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCC REDWLESGLSSLRFISCQQVSAQGHFRPVGSETFGRAYENLPFDQQPLEAWAAIDAATAA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH FEATGDENWLHHAETAYRWFFGGNDRGVVLADIASGRCRDGVTPQGVNLNCGAESILAFQ HCCCCCCCHHHHHHHHEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH LAHYSICAVAGRTAEGRAILAGRTSEKIAERINSRGAQQLAGA HHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHCCHHHHCCC >Mature Secondary Structure MLRRGATLSPDVRLFIDRTGSGTGRPAQHSEHHKAMKSSSTTYRHADAVPPGSVLSFLRR CCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEECCCCCHHHHHHHHHH ADAAVCRRIALIGGFRPRKCGIATFTTDIYEQLGAHHPDVAVDLHVVDDPLAVHVYEGVR HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEHHHHHHH GIIRSDRPEDYRAAARRINEDAVDAVWLQHEYGIFGGEAGEMVLELVDRIAAPLIVTLHT HHHCCCCCHHHHHHHHHCCHHHHHHHHEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VLAEPSDKQRAVLEHLLRRASGVMVMSDHSRKLLRQIYRVDADRIAVIAHGAPDRPFGRE HHCCCCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC EEHKRQFGLEGRRVMMTFGLLGPGKGLETVIEALPAIAENHPDVVYRIVGATHPNLVARD HHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC GERYREGLMELAERLGVAANVQWDNRFLDTEELLDQLEACDIYLTPYPNMQQSTSGTLSY CHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHCEEEECCCCCCCCCCCCHHHH AVALGKAVVSTPYVHARELLAEGVGVLVEPRQADVIAAAVNRLLDDPQELRAVKRRAWEK HHHHHHHHHHCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH GRETIWPCFARGARDLVESVAVQPCRPMPLLATPGFAGVAAMGDATGIMQHSIGTVPDRR CCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHCCHHHHHHHHCCCCCCCC HGYCLDDNVRALMLMGVADAVPVAERQRWAMIYASFIQHAWNPDRQAFRNFMNFDRTWCE CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHH DVGSDDSNGRTVWALGGAMRNAPDEGLRAWASQWFDIALAPVAAMEPPRTVAFVMLGCAQ HCCCCCCCCCEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH ALKANPDHAAARTSLEHGANLLHALLASSRRPDWAWFEAVLGYDNPRLSQALIEAGTLLG HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCC REDWLESGLSSLRFISCQQVSAQGHFRPVGSETFGRAYENLPFDQQPLEAWAAIDAATAA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH FEATGDENWLHHAETAYRWFFGGNDRGVVLADIASGRCRDGVTPQGVNLNCGAESILAFQ HCCCCCCCHHHHHHHHEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH LAHYSICAVAGRTAEGRAILAGRTSEKIAERINSRGAQQLAGA HHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA