Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87198765

Identifier: 87198765

GI number: 87198765

Start: 784842

End: 786134

Strand: Direct

Name: 87198765

Synonym: Saro_0741

Alternate gene names: NA

Gene position: 784842-786134 (Clockwise)

Preceding gene: 87198764

Following gene: 87198766

Centisome position: 22.04

GC content: 61.95

Gene sequence:

>1293_bases
TTGCGGGTGCTTGATCAAAGACTTCACGCCGACCCTTCGCGGGTCGTCCTCAGACCGTTCCACCTTGGTTGGCAGGGGCC
GGGCGGGCACGGCGCGCGTGCGGCAAAGCTCGTGGCGGATGTCGTCGCGCTTAGCGAGGACGAGGCGGCCGAGGAATACA
CGCGCGTTCTCCACGACTTCGAGGAACGCCATTGGCAGACTGAGCAACTGTTCGAGGAGCGCTATGCCGAGATCGAGACC
ATGCTCGACTTCGATGGCTCGTCGCTGTCGGAGCGTCGCAAGCGCCTGATCGGCGCATACTTCTGCCATGAATATACTTA
CGCCGCCGCCGCGCTGATGAATCCAAGCATCGTCCAGCATCCGGATCAGTCGGGCATGGGGGAGGGGGCGGTTCGCTTCG
TCATGAGCCTGCGGGCAGTGGGTGAGGGGCATATCAGTTCCATCGTGTTTCGCGAGGGAATCGCCTTGCCCGACGGGCAG
TTCGAGCTCTGGCCGCAGAGCCACTTTGCAACCGCGATGCAGGCGGATGACAGCATGGCCGCGTGCATTGGCGATGACTG
CCCGGTGACCGTTCACCGCCATGCCGAAAGCACCCTTTCGAACAGCGTGATCTTCCCGATCACCGAACAGCAGCGTGGAG
GCCTCGAGGACCTGCGTCTTGTGCGGTTCGATCACGGCGGTGGGAATTATGAATGGGTCGGGACCTATACGGCCTATTCC
GGCGCCTCGATCCGGTCGGAACTGATGCTCACCCGCGATTTCCGGCGCTTCGTACTTGAACCGATCAAGGGCAAGGCCGG
CCGCAACAAGGGCATGGCGCTTTTCCCGCAGAAGATAGGTGGCCAGTTCTGCATGGTCGGTCGCCAGGACGGCAAGAACC
TCTTTCTCTTGCGGTCGGATCGGCTGGACTGCTGGGACGACGACGGGACTCTCCTGATGGAGCCGAAGTACCCTTGGGAG
TTCGTGCAAATCGGCAATTGCGGCAGTCCGATCCTGACCGAGCATGGCTGGCTTCTGTTCACCCACGGGGTGGGGGCCAT
GCGCAAGTATGCCCTGGGTTGCGCGCTGCTTGACCGCGACGATCCGTCGCGCGTCATAGCCCGCTCCGCCAAGCCGATCC
TTACCGCGATCGACGCCGATCGCTTCGGTTACGTCCCGAATGTGGTCTATACTTGCGGTGCGCTTTTGGTCGGAGAGCAA
CTCCTTGTGCCCTATGGCATTTCCGACAGCGCAGTGGGTTTCGCTACCACTTCGGTCGCCGATCTGCTGGCAATGATGGT
GGATTGTCCCTAG

Upstream 100 bases:

>100_bases
TGTGCCGTGGCCGGCCGGACTGCCGAAGGGCGTGCAATTCTGGCTGGGCGCACCAGCGAGAAGATTGCGGAACGCATCAA
TAGCAGGGGTGCTCAACAGC

Downstream 100 bases:

>100_bases
AAGCCGGCCAAAACGGGCGCGCGGCAAAACTCAGATCAAGGCAGCAAATGACCGATACAGTTCCTGTCGTACTATGTGGG
GGCAGCGGCACCCGCCTCTG

Product: glycosidase, PH1107-related

Products: NA

Alternate protein names: Glycosidase Related Protein; Glycosidase-Like Protein; Glycosylase; Conserved Domain Protein; Glycosidase-Related; Glycosidase-Related Protein; Cytoplasmic Protein; Glycosylase-Like Protein; Unknwon Conserved Protein

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MRVLDQRLHADPSRVVLRPFHLGWQGPGGHGARAAKLVADVVALSEDEAAEEYTRVLHDFEERHWQTEQLFEERYAEIET
MLDFDGSSLSERRKRLIGAYFCHEYTYAAAALMNPSIVQHPDQSGMGEGAVRFVMSLRAVGEGHISSIVFREGIALPDGQ
FELWPQSHFATAMQADDSMAACIGDDCPVTVHRHAESTLSNSVIFPITEQQRGGLEDLRLVRFDHGGGNYEWVGTYTAYS
GASIRSELMLTRDFRRFVLEPIKGKAGRNKGMALFPQKIGGQFCMVGRQDGKNLFLLRSDRLDCWDDDGTLLMEPKYPWE
FVQIGNCGSPILTEHGWLLFTHGVGAMRKYALGCALLDRDDPSRVIARSAKPILTAIDADRFGYVPNVVYTCGALLVGEQ
LLVPYGISDSAVGFATTSVADLLAMMVDCP

Sequences:

>Translated_430_residues
MRVLDQRLHADPSRVVLRPFHLGWQGPGGHGARAAKLVADVVALSEDEAAEEYTRVLHDFEERHWQTEQLFEERYAEIET
MLDFDGSSLSERRKRLIGAYFCHEYTYAAAALMNPSIVQHPDQSGMGEGAVRFVMSLRAVGEGHISSIVFREGIALPDGQ
FELWPQSHFATAMQADDSMAACIGDDCPVTVHRHAESTLSNSVIFPITEQQRGGLEDLRLVRFDHGGGNYEWVGTYTAYS
GASIRSELMLTRDFRRFVLEPIKGKAGRNKGMALFPQKIGGQFCMVGRQDGKNLFLLRSDRLDCWDDDGTLLMEPKYPWE
FVQIGNCGSPILTEHGWLLFTHGVGAMRKYALGCALLDRDDPSRVIARSAKPILTAIDADRFGYVPNVVYTCGALLVGEQ
LLVPYGISDSAVGFATTSVADLLAMMVDCP
>Mature_430_residues
MRVLDQRLHADPSRVVLRPFHLGWQGPGGHGARAAKLVADVVALSEDEAAEEYTRVLHDFEERHWQTEQLFEERYAEIET
MLDFDGSSLSERRKRLIGAYFCHEYTYAAAALMNPSIVQHPDQSGMGEGAVRFVMSLRAVGEGHISSIVFREGIALPDGQ
FELWPQSHFATAMQADDSMAACIGDDCPVTVHRHAESTLSNSVIFPITEQQRGGLEDLRLVRFDHGGGNYEWVGTYTAYS
GASIRSELMLTRDFRRFVLEPIKGKAGRNKGMALFPQKIGGQFCMVGRQDGKNLFLLRSDRLDCWDDDGTLLMEPKYPWE
FVQIGNCGSPILTEHGWLLFTHGVGAMRKYALGCALLDRDDPSRVIARSAKPILTAIDADRFGYVPNVVYTCGALLVGEQ
LLVPYGISDSAVGFATTSVADLLAMMVDCP

Specific function: Unknown

COG id: COG2152

COG function: function code G; Predicted glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47700; Mature: 47700

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLDQRLHADPSRVVLRPFHLGWQGPGGHGARAAKLVADVVALSEDEAAEEYTRVLHDF
CCCHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
EERHWQTEQLFEERYAEIETMLDFDGSSLSERRKRLIGAYFCHEYTYAAAALMNPSIVQH
HHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC
PDQSGMGEGAVRFVMSLRAVGEGHISSIVFREGIALPDGQFELWPQSHFATAMQADDSMA
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHH
ACIGDDCPVTVHRHAESTLSNSVIFPITEQQRGGLEDLRLVRFDHGGGNYEWVGTYTAYS
HHCCCCCCEEEEHHHHHHHCCCEEEEECCHHCCCCCCEEEEEEECCCCCEEEEEEEEECC
GASIRSELMLTRDFRRFVLEPIKGKAGRNKGMALFPQKIGGQFCMVGRQDGKNLFLLRSD
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHCCCEEEEECCCCCEEEEEECC
RLDCWDDDGTLLMEPKYPWEFVQIGNCGSPILTEHGWLLFTHGVGAMRKYALGCALLDRD
CCCEECCCCCEEECCCCCEEEEEECCCCCCCHHCCCEEEEECCHHHHHHHHHHEEEECCC
DPSRVIARSAKPILTAIDADRFGYVPNVVYTCGALLVGEQLLVPYGISDSAVGFATTSVA
CHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHH
DLLAMMVDCP
HHHHHHHCCC
>Mature Secondary Structure
MRVLDQRLHADPSRVVLRPFHLGWQGPGGHGARAAKLVADVVALSEDEAAEEYTRVLHDF
CCCHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
EERHWQTEQLFEERYAEIETMLDFDGSSLSERRKRLIGAYFCHEYTYAAAALMNPSIVQH
HHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC
PDQSGMGEGAVRFVMSLRAVGEGHISSIVFREGIALPDGQFELWPQSHFATAMQADDSMA
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHH
ACIGDDCPVTVHRHAESTLSNSVIFPITEQQRGGLEDLRLVRFDHGGGNYEWVGTYTAYS
HHCCCCCCEEEEHHHHHHHCCCEEEEECCHHCCCCCCEEEEEEECCCCCEEEEEEEEECC
GASIRSELMLTRDFRRFVLEPIKGKAGRNKGMALFPQKIGGQFCMVGRQDGKNLFLLRSD
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHCCCEEEEECCCCCEEEEEECC
RLDCWDDDGTLLMEPKYPWEFVQIGNCGSPILTEHGWLLFTHGVGAMRKYALGCALLDRD
CCCEECCCCCEEECCCCCEEEEEECCCCCCCHHCCCEEEEECCHHHHHHHHHHEEEECCC
DPSRVIARSAKPILTAIDADRFGYVPNVVYTCGALLVGEQLLVPYGISDSAVGFATTSVA
CHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHH
DLLAMMVDCP
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA