Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87198763

Identifier: 87198763

GI number: 87198763

Start: 781541

End: 782284

Strand: Direct

Name: 87198763

Synonym: Saro_0739

Alternate gene names: NA

Gene position: 781541-782284 (Clockwise)

Preceding gene: 87198761

Following gene: 87198764

Centisome position: 21.94

GC content: 68.01

Gene sequence:

>744_bases
ATGACGACGCATGATTCGGACGATACGGCGCTCCGTGCCAACCAGCAGGCATTCTCCCGCGACCGTTTCGTGGCCACGGG
CCTTGCCCTGGCCCTTCATCTGGGCGTTCTGTGGGTGGTCGTGCTCGGCTTTGGCGGCGTTCCCGCGCTCCTCCCCGAGG
TCAAGGACCGGTTCGTCACCCAAACCTTTGACGTACCGCTCGAGAAGCCGCAGCCTTCGCCAAGCCCGACCGCTCCGGAG
CCGGCGGGCGCCTCGGGCGAGGAGGGGCGCAAGGCAGTGGCTCGGCCGGTGATCGCCAAGGCACGTGTCCCATCGCGCAA
GGAGCTGGCGCCGCCGGTGGCGTCGACCGGCAGGGACAATGCCTCCGGTTCGTCCGACAAGGGCGCTGGCACGGGTGGCG
GAGGTGAGGGCCAGGGTACCGGAAGTGGCCTCAGCGGTACCGGTTCGGGAGGCGGGCTCGCCCGCAAGGCAGAGAAGATC
GCCGGCGATATCCGCTCGACCCGCGACTATCCGGTCGGCAGCCAGGAGGAGCGCATTGGCAAACGGGTGGTCATCCTGCT
GACCGTGGCCGCCGATGGACGGGTTTCCGACTGCCGGATCTATCGTCCGAGTGGCGTGCCAGAAGCCGATGCCGTGACCT
GCCGGCTTGCCAGGGAGCGCTTCCGTTTCCGTCCCGCGACTGACGCTTCCGGCAATCCGATCGTCTCCACCTATGGGTGG
GAGCAGAGATGGTTCGCACCGTGA

Upstream 100 bases:

>100_bases
ACCCTGTCCACCACGCCATGGTCGCAGGCGGGGTGCAGTTCGTCGCGTTTTGGGGCACGGTGGCAGCAGCTTTCCCCGCG
CGCAGAGGTTCATGACGGCG

Downstream 100 bases:

>100_bases
TGTTGCGGTGCGGCAAGTCACTGTGGGTCAAGAAGAACTGATCTCCTGTCAGGCCTTCTGCCGGCCTTTGAGACGAATGG
TGGCGCGACTCGGGACGGAA

Product: TonB-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MTTHDSDDTALRANQQAFSRDRFVATGLALALHLGVLWVVVLGFGGVPALLPEVKDRFVTQTFDVPLEKPQPSPSPTAPE
PAGASGEEGRKAVARPVIAKARVPSRKELAPPVASTGRDNASGSSDKGAGTGGGGEGQGTGSGLSGTGSGGGLARKAEKI
AGDIRSTRDYPVGSQEERIGKRVVILLTVAADGRVSDCRIYRPSGVPEADAVTCRLARERFRFRPATDASGNPIVSTYGW
EQRWFAP

Sequences:

>Translated_247_residues
MTTHDSDDTALRANQQAFSRDRFVATGLALALHLGVLWVVVLGFGGVPALLPEVKDRFVTQTFDVPLEKPQPSPSPTAPE
PAGASGEEGRKAVARPVIAKARVPSRKELAPPVASTGRDNASGSSDKGAGTGGGGEGQGTGSGLSGTGSGGGLARKAEKI
AGDIRSTRDYPVGSQEERIGKRVVILLTVAADGRVSDCRIYRPSGVPEADAVTCRLARERFRFRPATDASGNPIVSTYGW
EQRWFAP
>Mature_246_residues
TTHDSDDTALRANQQAFSRDRFVATGLALALHLGVLWVVVLGFGGVPALLPEVKDRFVTQTFDVPLEKPQPSPSPTAPEP
AGASGEEGRKAVARPVIAKARVPSRKELAPPVASTGRDNASGSSDKGAGTGGGGEGQGTGSGLSGTGSGGGLARKAEKIA
GDIRSTRDYPVGSQEERIGKRVVILLTVAADGRVSDCRIYRPSGVPEADAVTCRLARERFRFRPATDASGNPIVSTYGWE
QRWFAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25819; Mature: 25688

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTHDSDDTALRANQQAFSRDRFVATGLALALHLGVLWVVVLGFGGVPALLPEVKDRFVT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
QTFDVPLEKPQPSPSPTAPEPAGASGEEGRKAVARPVIAKARVPSRKELAPPVASTGRDN
HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCHHCCCCC
ASGSSDKGAGTGGGGEGQGTGSGLSGTGSGGGLARKAEKIAGDIRSTRDYPVGSQEERIG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHC
KRVVILLTVAADGRVSDCRIYRPSGVPEADAVTCRLARERFRFRPATDASGNPIVSTYGW
CEEEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCC
EQRWFAP
CCCCCCC
>Mature Secondary Structure 
TTHDSDDTALRANQQAFSRDRFVATGLALALHLGVLWVVVLGFGGVPALLPEVKDRFVT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
QTFDVPLEKPQPSPSPTAPEPAGASGEEGRKAVARPVIAKARVPSRKELAPPVASTGRDN
HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCHHCCCCC
ASGSSDKGAGTGGGGEGQGTGSGLSGTGSGGGLARKAEKIAGDIRSTRDYPVGSQEERIG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHC
KRVVILLTVAADGRVSDCRIYRPSGVPEADAVTCRLARERFRFRPATDASGNPIVSTYGW
CEEEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCC
EQRWFAP
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA