Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198763
Identifier: 87198763
GI number: 87198763
Start: 781541
End: 782284
Strand: Direct
Name: 87198763
Synonym: Saro_0739
Alternate gene names: NA
Gene position: 781541-782284 (Clockwise)
Preceding gene: 87198761
Following gene: 87198764
Centisome position: 21.94
GC content: 68.01
Gene sequence:
>744_bases ATGACGACGCATGATTCGGACGATACGGCGCTCCGTGCCAACCAGCAGGCATTCTCCCGCGACCGTTTCGTGGCCACGGG CCTTGCCCTGGCCCTTCATCTGGGCGTTCTGTGGGTGGTCGTGCTCGGCTTTGGCGGCGTTCCCGCGCTCCTCCCCGAGG TCAAGGACCGGTTCGTCACCCAAACCTTTGACGTACCGCTCGAGAAGCCGCAGCCTTCGCCAAGCCCGACCGCTCCGGAG CCGGCGGGCGCCTCGGGCGAGGAGGGGCGCAAGGCAGTGGCTCGGCCGGTGATCGCCAAGGCACGTGTCCCATCGCGCAA GGAGCTGGCGCCGCCGGTGGCGTCGACCGGCAGGGACAATGCCTCCGGTTCGTCCGACAAGGGCGCTGGCACGGGTGGCG GAGGTGAGGGCCAGGGTACCGGAAGTGGCCTCAGCGGTACCGGTTCGGGAGGCGGGCTCGCCCGCAAGGCAGAGAAGATC GCCGGCGATATCCGCTCGACCCGCGACTATCCGGTCGGCAGCCAGGAGGAGCGCATTGGCAAACGGGTGGTCATCCTGCT GACCGTGGCCGCCGATGGACGGGTTTCCGACTGCCGGATCTATCGTCCGAGTGGCGTGCCAGAAGCCGATGCCGTGACCT GCCGGCTTGCCAGGGAGCGCTTCCGTTTCCGTCCCGCGACTGACGCTTCCGGCAATCCGATCGTCTCCACCTATGGGTGG GAGCAGAGATGGTTCGCACCGTGA
Upstream 100 bases:
>100_bases ACCCTGTCCACCACGCCATGGTCGCAGGCGGGGTGCAGTTCGTCGCGTTTTGGGGCACGGTGGCAGCAGCTTTCCCCGCG CGCAGAGGTTCATGACGGCG
Downstream 100 bases:
>100_bases TGTTGCGGTGCGGCAAGTCACTGTGGGTCAAGAAGAACTGATCTCCTGTCAGGCCTTCTGCCGGCCTTTGAGACGAATGG TGGCGCGACTCGGGACGGAA
Product: TonB-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MTTHDSDDTALRANQQAFSRDRFVATGLALALHLGVLWVVVLGFGGVPALLPEVKDRFVTQTFDVPLEKPQPSPSPTAPE PAGASGEEGRKAVARPVIAKARVPSRKELAPPVASTGRDNASGSSDKGAGTGGGGEGQGTGSGLSGTGSGGGLARKAEKI AGDIRSTRDYPVGSQEERIGKRVVILLTVAADGRVSDCRIYRPSGVPEADAVTCRLARERFRFRPATDASGNPIVSTYGW EQRWFAP
Sequences:
>Translated_247_residues MTTHDSDDTALRANQQAFSRDRFVATGLALALHLGVLWVVVLGFGGVPALLPEVKDRFVTQTFDVPLEKPQPSPSPTAPE PAGASGEEGRKAVARPVIAKARVPSRKELAPPVASTGRDNASGSSDKGAGTGGGGEGQGTGSGLSGTGSGGGLARKAEKI AGDIRSTRDYPVGSQEERIGKRVVILLTVAADGRVSDCRIYRPSGVPEADAVTCRLARERFRFRPATDASGNPIVSTYGW EQRWFAP >Mature_246_residues TTHDSDDTALRANQQAFSRDRFVATGLALALHLGVLWVVVLGFGGVPALLPEVKDRFVTQTFDVPLEKPQPSPSPTAPEP AGASGEEGRKAVARPVIAKARVPSRKELAPPVASTGRDNASGSSDKGAGTGGGGEGQGTGSGLSGTGSGGGLARKAEKIA GDIRSTRDYPVGSQEERIGKRVVILLTVAADGRVSDCRIYRPSGVPEADAVTCRLARERFRFRPATDASGNPIVSTYGWE QRWFAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25819; Mature: 25688
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHDSDDTALRANQQAFSRDRFVATGLALALHLGVLWVVVLGFGGVPALLPEVKDRFVT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH QTFDVPLEKPQPSPSPTAPEPAGASGEEGRKAVARPVIAKARVPSRKELAPPVASTGRDN HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCHHCCCCC ASGSSDKGAGTGGGGEGQGTGSGLSGTGSGGGLARKAEKIAGDIRSTRDYPVGSQEERIG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHC KRVVILLTVAADGRVSDCRIYRPSGVPEADAVTCRLARERFRFRPATDASGNPIVSTYGW CEEEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCC EQRWFAP CCCCCCC >Mature Secondary Structure TTHDSDDTALRANQQAFSRDRFVATGLALALHLGVLWVVVLGFGGVPALLPEVKDRFVT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH QTFDVPLEKPQPSPSPTAPEPAGASGEEGRKAVARPVIAKARVPSRKELAPPVASTGRDN HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCHHCCCCC ASGSSDKGAGTGGGGEGQGTGSGLSGTGSGGGLARKAEKIAGDIRSTRDYPVGSQEERIG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHC KRVVILLTVAADGRVSDCRIYRPSGVPEADAVTCRLARERFRFRPATDASGNPIVSTYGW CEEEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCC EQRWFAP CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA