Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198740
Identifier: 87198740
GI number: 87198740
Start: 756152
End: 756931
Strand: Direct
Name: 87198740
Synonym: Saro_0716
Alternate gene names: NA
Gene position: 756152-756931 (Clockwise)
Preceding gene: 87198739
Following gene: 87198756
Centisome position: 21.23
GC content: 61.54
Gene sequence:
>780_bases ATGACCCGCCGTTTCGTCGACCTTTCGATCATGCTGGAGAACGAGGTCGTCACCGATCCGCCATTCATGCGCCCGCATAT CGAGTACCAGAAGCATGGCGACACGCTTGGCGAACTGGGCTTCTTCTTTCCCGGCGTGACGGCTGAGGACACACCCGATG CAGCCGGGTTCGCGGCGGCGGAGAAGGTGACGCTGACCACGCACAACGGCACGCACCTTGATGCGCCGTGGCATTTCCAT CCGACGCAGGATGGTGGCAAGCCGGCGATGACGATTGACGAAGTGCCGCTGGAATGGTGCTTCCAGCCCGGCGTGAAGCT TGATTTCCGTCACTTCCCGGATGGTTATGTGGTCACGGCGCAGGACGTCGAGGACGAACTCAAGCGCATCGGGCATGAGC TGACGCCGCTGGAGATCGTTCTGGTCAACACCGCAGCGGGCAAGGCTGTGGGCAATCCGAACTTCGTCAACATTGGTTGC GGGATGGGCTACGAGGCCACGATGTACCTCACCTCGCGCGGGGTCCGAGTGACCGGGACCGACGCATGGAGCTGGGACGC GCCGTTCAGCTATACGGCTGAAAAGGTCAAGGAAACCGGTGATAAGTCGCTGATTTGGGAAGGCCACAAGGCCGGTCGCG ACATCGGCTACTGCCATCTCGAGAAGCTGCACAACCTGGAAGTCCTGCCTGCCAGCGGCTTCACGGTCAGTTGCTTCCCC CACAAGATCAAGGGTGCATCCGCCGGCTGGACCCGGGCCGTGGCGATCTTCGAGGATTGA
Upstream 100 bases:
>100_bases GCAAAGCTGGCGTTCGGTGGCACCCTTGCCGCTATCGTCACGCCTGCCGGGCTTCGTGCCGAATTGATCAAGCGCTGAAG GGCGCAAGGGAGAACATGCC
Downstream 100 bases:
>100_bases GCGGGCGGGGCCCGTCCTAGGCGAAATCTTCTACCCGGAAGCCTTCGGCAAAGGCCTGTGCGAGCGCGGGCCGGTCGAGC TGGCCGAGCATCGGCAGGCG
Product: putative cyclase
Products: NA
Alternate protein names: Cyclase; Polyketide Cyclase; Cyclase Superfamily; Metal-Dependent Hydrolase; Cyclase Superfamily Protein
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MTRRFVDLSIMLENEVVTDPPFMRPHIEYQKHGDTLGELGFFFPGVTAEDTPDAAGFAAAEKVTLTTHNGTHLDAPWHFH PTQDGGKPAMTIDEVPLEWCFQPGVKLDFRHFPDGYVVTAQDVEDELKRIGHELTPLEIVLVNTAAGKAVGNPNFVNIGC GMGYEATMYLTSRGVRVTGTDAWSWDAPFSYTAEKVKETGDKSLIWEGHKAGRDIGYCHLEKLHNLEVLPASGFTVSCFP HKIKGASAGWTRAVAIFED
Sequences:
>Translated_259_residues MTRRFVDLSIMLENEVVTDPPFMRPHIEYQKHGDTLGELGFFFPGVTAEDTPDAAGFAAAEKVTLTTHNGTHLDAPWHFH PTQDGGKPAMTIDEVPLEWCFQPGVKLDFRHFPDGYVVTAQDVEDELKRIGHELTPLEIVLVNTAAGKAVGNPNFVNIGC GMGYEATMYLTSRGVRVTGTDAWSWDAPFSYTAEKVKETGDKSLIWEGHKAGRDIGYCHLEKLHNLEVLPASGFTVSCFP HKIKGASAGWTRAVAIFED >Mature_258_residues TRRFVDLSIMLENEVVTDPPFMRPHIEYQKHGDTLGELGFFFPGVTAEDTPDAAGFAAAEKVTLTTHNGTHLDAPWHFHP TQDGGKPAMTIDEVPLEWCFQPGVKLDFRHFPDGYVVTAQDVEDELKRIGHELTPLEIVLVNTAAGKAVGNPNFVNIGCG MGYEATMYLTSRGVRVTGTDAWSWDAPFSYTAEKVKETGDKSLIWEGHKAGRDIGYCHLEKLHNLEVLPASGFTVSCFPH KIKGASAGWTRAVAIFED
Specific function: Unknown
COG id: COG1878
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28576; Mature: 28445
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRFVDLSIMLENEVVTDPPFMRPHIEYQKHGDTLGELGFFFPGVTAEDTPDAAGFAAA CCCEEEEEEEEEECCEECCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCEE EKVTLTTHNGTHLDAPWHFHPTQDGGKPAMTIDEVPLEWCFQPGVKLDFRHFPDGYVVTA EEEEEEECCCCEECCCEEECCCCCCCCCCEEECCCCHHHHCCCCCEEEEEECCCCEEEEC QDVEDELKRIGHELTPLEIVLVNTAAGKAVGNPNFVNIGCGMGYEATMYLTSRGVRVTGT CCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEECCEEEEEC DAWSWDAPFSYTAEKVKETGDKSLIWEGHKAGRDIGYCHLEKLHNLEVLPASGFTVSCFP CCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCEEEHHHHCCEEEEECCCCEEEECC HKIKGASAGWTRAVAIFED CCCCCCCCCCEEEEEEEEC >Mature Secondary Structure TRRFVDLSIMLENEVVTDPPFMRPHIEYQKHGDTLGELGFFFPGVTAEDTPDAAGFAAA CCEEEEEEEEEECCEECCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCEE EKVTLTTHNGTHLDAPWHFHPTQDGGKPAMTIDEVPLEWCFQPGVKLDFRHFPDGYVVTA EEEEEEECCCCEECCCEEECCCCCCCCCCEEECCCCHHHHCCCCCEEEEEECCCCEEEEC QDVEDELKRIGHELTPLEIVLVNTAAGKAVGNPNFVNIGCGMGYEATMYLTSRGVRVTGT CCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEECCEEEEEC DAWSWDAPFSYTAEKVKETGDKSLIWEGHKAGRDIGYCHLEKLHNLEVLPASGFTVSCFP CCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCEEEHHHHCCEEEEECCCCEEEECC HKIKGASAGWTRAVAIFED CCCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA