Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87198739

Identifier: 87198739

GI number: 87198739

Start: 755671

End: 756129

Strand: Direct

Name: 87198739

Synonym: Saro_0715

Alternate gene names: NA

Gene position: 755671-756129 (Clockwise)

Preceding gene: 87198738

Following gene: 87198740

Centisome position: 21.22

GC content: 65.8

Gene sequence:

>459_bases
ATGCAGCCATCAGCCTACATCCGCCGCGAGACCGCCGTCAGCATCGTCATCAACCTGGTGTTGAGTGCGCTGTTTTTCAT
GGCGGTTTTCGGGCGGAGCGGGTCGGTGCCGGTCTGGGGTGTAGGGAGCTATGTCTTCGACTTCGGCCCGCAAGGGTTCA
TGATCGCGCTGATGGCGACGCTTGTGCCTGGCCTGCTGGCGCGCAAGGCGCGGACGAGCGGAAAGGTCGTCGCGATGGGC
GGTGCGGCGCGGCTGCCAGCGAACATTGCCGTGCGGGCCATGTTCTGCGGATTGCTGGGTGCCGCAACCGGTATGGCCGG
CAGCGCCCTGGTCGTTGCCCCATGGGGCGTCACGCACCTCGACTGGCTGACAGCCCTGCTGGCAAAGCTGGCGTTCGGTG
GCACCCTTGCCGCTATCGTCACGCCTGCCGGGCTTCGTGCCGAATTGATCAAGCGCTGA

Upstream 100 bases:

>100_bases
CGAAGGTGGCGTCGAACACGTCGGCGCCGACAACATGGCCTATGGCCGCGACTGCATTGCCGACTGGTTCGCCGAGACGT
TGGGCGGTACGACTGCCTGA

Downstream 100 bases:

>100_bases
AGGGCGCAAGGGAGAACATGCCATGACCCGCCGTTTCGTCGACCTTTCGATCATGCTGGAGAACGAGGTCGTCACCGATC
CGCCATTCATGCGCCCGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MQPSAYIRRETAVSIVINLVLSALFFMAVFGRSGSVPVWGVGSYVFDFGPQGFMIALMATLVPGLLARKARTSGKVVAMG
GAARLPANIAVRAMFCGLLGAATGMAGSALVVAPWGVTHLDWLTALLAKLAFGGTLAAIVTPAGLRAELIKR

Sequences:

>Translated_152_residues
MQPSAYIRRETAVSIVINLVLSALFFMAVFGRSGSVPVWGVGSYVFDFGPQGFMIALMATLVPGLLARKARTSGKVVAMG
GAARLPANIAVRAMFCGLLGAATGMAGSALVVAPWGVTHLDWLTALLAKLAFGGTLAAIVTPAGLRAELIKR
>Mature_152_residues
MQPSAYIRRETAVSIVINLVLSALFFMAVFGRSGSVPVWGVGSYVFDFGPQGFMIALMATLVPGLLARKARTSGKVVAMG
GAARLPANIAVRAMFCGLLGAATGMAGSALVVAPWGVTHLDWLTALLAKLAFGGTLAAIVTPAGLRAELIKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15719; Mature: 15719

Theoretical pI: Translated: 11.77; Mature: 11.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPSAYIRRETAVSIVINLVLSALFFMAVFGRSGSVPVWGVGSYVFDFGPQGFMIALMAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHCCCCHHHHHHHHH
LVPGLLARKARTSGKVVAMGGAARLPANIAVRAMFCGLLGAATGMAGSALVVAPWGVTHL
HHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHH
DWLTALLAKLAFGGTLAAIVTPAGLRAELIKR
HHHHHHHHHHHCCCHHHHHHCCCCHHHHHHCC
>Mature Secondary Structure
MQPSAYIRRETAVSIVINLVLSALFFMAVFGRSGSVPVWGVGSYVFDFGPQGFMIALMAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHCCCCHHHHHHHHH
LVPGLLARKARTSGKVVAMGGAARLPANIAVRAMFCGLLGAATGMAGSALVVAPWGVTHL
HHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHH
DWLTALLAKLAFGGTLAAIVTPAGLRAELIKR
HHHHHHHHHHHCCCHHHHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA