Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
---|---|
Accession | NC_007794 |
Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is mcpII [H]
Identifier: 87198737
GI number: 87198737
Start: 753607
End: 754509
Strand: Direct
Name: mcpII [H]
Synonym: Saro_0713
Alternate gene names: 87198737
Gene position: 753607-754509 (Clockwise)
Preceding gene: 87198736
Following gene: 87198738
Centisome position: 21.16
GC content: 64.12
Gene sequence:
>903_bases ATGAGCCGCGTGACCGAAATCCGCTATGTCGGATATGGCGTGAAGGACTTTGACGCCGAAAAGGCGTTCTATGCCGATGT CTGGGGCCTGGAACCAGTGGGCGAGGATGCAAACAACGCCTGGTTCAAGGCACAGGGCGCCGATGAGCATCACGTCGTCC AGTTGCGGCGCGCCGACGAGAACCGCATCGACGTCATCGCGCTTGCCGCCGACAGCCGTTCCGATGTCGATGCCCTGCGT GCCAGCGTGGAAGCGGCCGGGTGCAAGGTCGCGAGCGAGCCGGCCGTGCTGGCCACGCCCGGCGGCGGCTACGGCTTCCG CTTCTTCTCGCCCGATGGCTTGCTGTTCGAAGTGTCGAGCGACGTGGCCAAGGGGGCAAAGCGCGATCTGGCACGCTGGG AAGGCGTACCGGTAAAGATCAGCCACATCGTGTTGCATTCGCCCAACCATCAGGACATGGTGAAGTTCTTTACCGATGTG CTGGGCTTCAAGGTTTCCGACTGGCTCGGCGACTTCATGTGCTTCCTGCGCTGCAATTCGGCGCACCACCGCATCGCCAT CCTGCCCGGGCCGCCGTGCCTGAACCATGTGGCCTACGACATGCTCTCGGTCGACGACATGATGCGCGGGGCGCACCGCC TGAAGGTCAAGGGCATCGACATCGGCTGGGGCCCGGGACGCCACACTGCGGGCAACAACACCTTCAGCTATTTCGTGACG CCTGGCGGTTTCGTCACCGAGTACACTTCGGAGCTGGAAGAGGTCGATTTCGACACGCACCAGTACAAGGTGCACGTGCC CGCGCCGATGGTCATGGACCAGTGGGGCATCGGCACCGGCGGCCCGCAGACGTTGCCGCACCCGCACGCCAACCCCGGCC TGTTCCAGACGGCAGAGGCCTGA
Upstream 100 bases:
>100_bases AGCTCGGCAAGGCGCCGCCGGTCGACAATCACAAGGCGACTGCCGAAATGTTCGGCGTCGTCTCGCAACCCATCTGATCC CAGCTTCAAGGAAGATCTCA
Downstream 100 bases:
>100_bases TCCATGGCGCTCTACGAACCGTTCCCGAACTACATCTGGAATCTCTCGGTTTCGATCGCGATGGAGAGCGGCGGGCAGAT CGGCGAAATCGTCGACATGT
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: MPC; CatO2ase; Catechol 2,3-dioxygenase II [H]
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MSRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDANNAWFKAQGADEHHVVQLRRADENRIDVIALAADSRSDVDALR ASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDVAKGAKRDLARWEGVPVKISHIVLHSPNHQDMVKFFTDV LGFKVSDWLGDFMCFLRCNSAHHRIAILPGPPCLNHVAYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVT PGGFVTEYTSELEEVDFDTHQYKVHVPAPMVMDQWGIGTGGPQTLPHPHANPGLFQTAEA
Sequences:
>Translated_300_residues MSRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDANNAWFKAQGADEHHVVQLRRADENRIDVIALAADSRSDVDALR ASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDVAKGAKRDLARWEGVPVKISHIVLHSPNHQDMVKFFTDV LGFKVSDWLGDFMCFLRCNSAHHRIAILPGPPCLNHVAYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVT PGGFVTEYTSELEEVDFDTHQYKVHVPAPMVMDQWGIGTGGPQTLPHPHANPGLFQTAEA >Mature_299_residues SRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDANNAWFKAQGADEHHVVQLRRADENRIDVIALAADSRSDVDALRA SVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDVAKGAKRDLARWEGVPVKISHIVLHSPNHQDMVKFFTDVL GFKVSDWLGDFMCFLRCNSAHHRIAILPGPPCLNHVAYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTP GGFVTEYTSELEEVDFDTHQYKVHVPAPMVMDQWGIGTGGPQTLPHPHANPGLFQTAEA
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 - InterPro: IPR000486 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: =1.13.11.2 [H]
Molecular weight: Translated: 32942; Mature: 32811
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDANNAWFKAQGADEHHVVQLRRADE CCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCC NRIDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSS CCEEEEEEECCCCCHHHHHHHHHHHHCCEECCCCEEEEECCCCCEEEEECCCCEEEEECC DVAKGAKRDLARWEGVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLGDFMCFLRCNS HHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHEECC AHHRIAILPGPPCLNHVAYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVT CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEC PGGFVTEYTSELEEVDFDTHQYKVHVPAPMVMDQWGIGTGGPQTLPHPHANPGLFQTAEA CCCHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCEECCCC >Mature Secondary Structure SRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDANNAWFKAQGADEHHVVQLRRADE CCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCC NRIDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSS CCEEEEEEECCCCCHHHHHHHHHHHHCCEECCCCEEEEECCCCCEEEEECCCCEEEEECC DVAKGAKRDLARWEGVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLGDFMCFLRCNS HHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHEECC AHHRIAILPGPPCLNHVAYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVT CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEC PGGFVTEYTSELEEVDFDTHQYKVHVPAPMVMDQWGIGTGGPQTLPHPHANPGLFQTAEA CCCHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2216726 [H]