Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is yetM [H]
Identifier: 87198736
GI number: 87198736
Start: 752468
End: 753583
Strand: Direct
Name: yetM [H]
Synonym: Saro_0712
Alternate gene names: 87198736
Gene position: 752468-753583 (Clockwise)
Preceding gene: 87198731
Following gene: 87198737
Centisome position: 21.13
GC content: 64.96
Gene sequence:
>1116_bases ATGAACAAGCTCGAAGCCCTGATCATAGGTGCCGGTATCGGAGGACTTTCCGCCGCAATAGCACTTGCCCGAAAGGGATT TTCCGTGACCGCGATCGAGCGTGACCCTTCGTGGTCGGTCTATGGCGTCGGCATCATCCAGCAGTCGAACGTCGTGCGCG CGATGGAGCAGCTTGGCGTACTCGACAGCTTCCTTGATGCGGCCTGCGGCTTCGACGCGGTCGAGATCTTTGCTCCTGAC GGCACCAAGGTTGCCCGCGTTCCGTCGCCGCGGCTGGTGGAGGGCAAGCCCGCCAACGTCGGCATCGGCCGCCGTGCGCT TCAGAAGGTGCTGGGCGACAGCGCCAAGGCGCTGGGCACCGACTTGAGGCTCGGCCTGACTGCCGAAAGGATCGACGATG ACGGGGAGAAGGTTGCCGTTACCTTCTCCGACGGTTCAACCGGCAGCTATGACGTGGTGATCGGCGCGGATGGGGTCTAT TCGCAGACCCGCTCGATGATCCTGCCCGACGCGGAAAAGCCGCAGTTCACCGGACAGGCTGTGTGGCGCTACAACTTCCC GCGTGCGGAGGGCCTCGACGCGCTGCAGGTCTACAACGGGCCGACCGGAGTCGGGCTCGTGCCGATGAGCGCGGACGTCA TGTACATGTACGTGACAACCCCCGAGCCCGACAATCCGCGCTACCCCACCGAAGGCATTGCCGCCGCGATGCGCGGCAAG CTTGCCAATTGCAGCCCGCAGATCCGTGCGCTGGGCGAACAGATCACCGACGACGAGGGCGTGGTCTACCGTCCCCTCGA AGGCATGATGGTGCATGGGCCCTGGAGCAAGGGTCGCGTCGGGCTGCTCGGCGATGCGGTCCACGCCACAACGCCACACC TTGGACAGGGCGCCGGCATGGCGATCGAGGATGCACTCGTCCTGGCAGAGGAGCTTGAACGCCACGACGACGTCGAGGCC GCGCTCAAGGCCTATCGCGACCGCCGTTACGAGCGCTGCCGCTACATCGTGGAATCCAGCCTCGCGATCTGCCTCGGCCA GCTCGGCAAGGCGCCGCCGGTCGACAATCACAAGGCGACTGCCGAAATGTTCGGCGTCGTCTCGCAACCCATCTGA
Upstream 100 bases:
>100_bases TGCTTTATTGATTGGTGTTGCAGCCCTAAGCATCGCCGCATCAGAAATCCGCAGAAGGGAGGGGCCCGCAATCCGTCAGC GCGGTTGCGGGCTGTATGTC
Downstream 100 bases:
>100_bases TCCCAGCTTCAAGGAAGATCTCAATGAGCCGCGTGACCGAAATCCGCTATGTCGGATATGGCGTGAAGGACTTTGACGCC GAAAAGGCGTTCTATGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MNKLEALIIGAGIGGLSAAIALARKGFSVTAIERDPSWSVYGVGIIQQSNVVRAMEQLGVLDSFLDAACGFDAVEIFAPD GTKVARVPSPRLVEGKPANVGIGRRALQKVLGDSAKALGTDLRLGLTAERIDDDGEKVAVTFSDGSTGSYDVVIGADGVY SQTRSMILPDAEKPQFTGQAVWRYNFPRAEGLDALQVYNGPTGVGLVPMSADVMYMYVTTPEPDNPRYPTEGIAAAMRGK LANCSPQIRALGEQITDDEGVVYRPLEGMMVHGPWSKGRVGLLGDAVHATTPHLGQGAGMAIEDALVLAEELERHDDVEA ALKAYRDRRYERCRYIVESSLAICLGQLGKAPPVDNHKATAEMFGVVSQPI
Sequences:
>Translated_371_residues MNKLEALIIGAGIGGLSAAIALARKGFSVTAIERDPSWSVYGVGIIQQSNVVRAMEQLGVLDSFLDAACGFDAVEIFAPD GTKVARVPSPRLVEGKPANVGIGRRALQKVLGDSAKALGTDLRLGLTAERIDDDGEKVAVTFSDGSTGSYDVVIGADGVY SQTRSMILPDAEKPQFTGQAVWRYNFPRAEGLDALQVYNGPTGVGLVPMSADVMYMYVTTPEPDNPRYPTEGIAAAMRGK LANCSPQIRALGEQITDDEGVVYRPLEGMMVHGPWSKGRVGLLGDAVHATTPHLGQGAGMAIEDALVLAEELERHDDVEA ALKAYRDRRYERCRYIVESSLAICLGQLGKAPPVDNHKATAEMFGVVSQPI >Mature_371_residues MNKLEALIIGAGIGGLSAAIALARKGFSVTAIERDPSWSVYGVGIIQQSNVVRAMEQLGVLDSFLDAACGFDAVEIFAPD GTKVARVPSPRLVEGKPANVGIGRRALQKVLGDSAKALGTDLRLGLTAERIDDDGEKVAVTFSDGSTGSYDVVIGADGVY SQTRSMILPDAEKPQFTGQAVWRYNFPRAEGLDALQVYNGPTGVGLVPMSADVMYMYVTTPEPDNPRYPTEGIAAAMRGK LANCSPQIRALGEQITDDEGVVYRPLEGMMVHGPWSKGRVGLLGDAVHATTPHLGQGAGMAIEDALVLAEELERHDDVEA ALKAYRDRRYERCRYIVESSLAICLGQLGKAPPVDNHKATAEMFGVVSQPI
Specific function: Unknown
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: NA
Molecular weight: Translated: 39544; Mature: 39544
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLEALIIGAGIGGLSAAIALARKGFSVTAIERDPSWSVYGVGIIQQSNVVRAMEQLGV CCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEECCHHHHHHHHHHH LDSFLDAACGFDAVEIFAPDGTKVARVPSPRLVEGKPANVGIGRRALQKVLGDSAKALGT HHHHHHHHCCCCEEEEECCCCCEEEECCCCCEECCCCCCCCCCHHHHHHHHCCCHHHHCC DLRLGLTAERIDDDGEKVAVTFSDGSTGSYDVVIGADGVYSQTRSMILPDAEKPQFTGQA CEEECEEHHHCCCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHCEECCCCCCCCCCCCE VWRYNFPRAEGLDALQVYNGPTGVGLVPMSADVMYMYVTTPEPDNPRYPTEGIAAAMRGK EEEECCCCCCCCCEEEEECCCCCCEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHCC LANCSPQIRALGEQITDDEGVVYRPLEGMMVHGPWSKGRVGLLGDAVHATTPHLGQGAGM CCCCCHHHHHHHHHCCCCCCEEEECCCCEEEECCCCCCCEEEEECHHHCCCCCCCCCCCC AIEDALVLAEELERHDDVEAALKAYRDRRYERCRYIVESSLAICLGQLGKAPPVDNHKAT HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH AEMFGVVSQPI HHHHHHHCCCC >Mature Secondary Structure MNKLEALIIGAGIGGLSAAIALARKGFSVTAIERDPSWSVYGVGIIQQSNVVRAMEQLGV CCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEECCHHHHHHHHHHH LDSFLDAACGFDAVEIFAPDGTKVARVPSPRLVEGKPANVGIGRRALQKVLGDSAKALGT HHHHHHHHCCCCEEEEECCCCCEEEECCCCCEECCCCCCCCCCHHHHHHHHCCCHHHHCC DLRLGLTAERIDDDGEKVAVTFSDGSTGSYDVVIGADGVYSQTRSMILPDAEKPQFTGQA CEEECEEHHHCCCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHCEECCCCCCCCCCCCE VWRYNFPRAEGLDALQVYNGPTGVGLVPMSADVMYMYVTTPEPDNPRYPTEGIAAAMRGK EEEECCCCCCCCCEEEEECCCCCCEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHCC LANCSPQIRALGEQITDDEGVVYRPLEGMMVHGPWSKGRVGLLGDAVHATTPHLGQGAGM CCCCCHHHHHHHHHCCCCCCEEEECCCCEEEECCCCCCCEEEEECHHHCCCCCCCCCCCC AIEDALVLAEELERHDDVEAALKAYRDRRYERCRYIVESSLAICLGQLGKAPPVDNHKAT HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH AEMFGVVSQPI HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9141694; 9384377 [H]