Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87198738

Identifier: 87198738

GI number: 87198738

Start: 754513

End: 755670

Strand: Direct

Name: 87198738

Synonym: Saro_0714

Alternate gene names: NA

Gene position: 754513-755670 (Clockwise)

Preceding gene: 87198737

Following gene: 87198739

Centisome position: 21.18

GC content: 65.2

Gene sequence:

>1158_bases
ATGGCGCTCTACGAACCGTTCCCGAACTACATCTGGAATCTCTCGGTTTCGATCGCGATGGAGAGCGGCGGGCAGATCGG
CGAAATCGTCGACATGTGCCAGCCGATTATCGATGCCGCCTCCAACGGCGGCGATGCCGGCACGCCGCAGTTCATGAAGC
AGTGGGCCGCCTATGGCGACAAGCTGATCGCGCTTGCCGCCGAGGACGAGGCTAGGGGGCGCATGTTCTCCGCCTCGAAC
AAGCTCGAGCGGGCTTCGCTCTACCTGCTGGTGGCAGAGCGCATGCAGGGTCATGGCGCACCGGGCCGCAAGGAGAGCTA
TGCGAAGGCGCGCGATGCCTTCGACAAGTCCACCGCGCTCGGCAAGATCAACCGCGAGCGGGTGGAGATCCCGCTCGGCA
AAGGCACGATGCCCGCGCTCTACACTCGCGCGCCGGGCAACGGCCCACATCCGGTTGTCGTTTATTGCAACGGCCTCGAT
AGCTGCAAGGAGCTGCTCTACTGGAGCCGCCTGCCCGAAGCGCTGGCCCGGCGCGGCATTTCGACAATCTGCGTCGACCA
GCCCGGTTCGGGCGAGGCCCTGCGCCTCCAGGACCTGCCGGTAGACCCGCATTCGGAGAACTGGGCCTCGAAGGCGGTGG
ACTGGCTGGAGCAGCAGCCCGACGTCGACCCCAAGCGCATCGGCATGACCGGCATCAGCCTCGGCGGCCACTTCGCCCCC
CGCGCCGTTGCCTACGAGCCGCGCTTTGCCTCGGGCGCGGTATGGGGTGCCAACCACAACTGGCGGGAGGTGCAGGACAA
GCGCCTCAAGCGCGAAGGCGAAAACCCGGTGCCCCACTATTGGGCGCATGTGATGTGGGCGTTCGGTGCCAGCGACATGG
ACGATTTCATGGTCAAGTCAGAGGACATGAACCTGAATGGCCACATGGACCGGATCAAGGTGCCGTTCCTCGTCACCCAT
GGGGCCGACGACCGCCAGATCAGCGTTTCCTACGCCGACGACCTCTATGACCAGCTCGTCAATTCGCCGCGCCGCGAGAA
GGTGATCTTCACCGCCCGCGAAGGTGGCGTCGAACACGTCGGCGCCGACAACATGGCCTATGGCCGCGACTGCATTGCCG
ACTGGTTCGCCGAGACGTTGGGCGGTACGACTGCCTGA

Upstream 100 bases:

>100_bases
GATGGTCATGGACCAGTGGGGCATCGGCACCGGCGGCCCGCAGACGTTGCCGCACCCGCACGCCAACCCCGGCCTGTTCC
AGACGGCAGAGGCCTGATCC

Downstream 100 bases:

>100_bases
ATGCAGCCATCAGCCTACATCCGCCGCGAGACCGCCGTCAGCATCGTCATCAACCTGGTGTTGAGTGCGCTGTTTTTCAT
GGCGGTTTTCGGGCGGAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MALYEPFPNYIWNLSVSIAMESGGQIGEIVDMCQPIIDAASNGGDAGTPQFMKQWAAYGDKLIALAAEDEARGRMFSASN
KLERASLYLLVAERMQGHGAPGRKESYAKARDAFDKSTALGKINRERVEIPLGKGTMPALYTRAPGNGPHPVVVYCNGLD
SCKELLYWSRLPEALARRGISTICVDQPGSGEALRLQDLPVDPHSENWASKAVDWLEQQPDVDPKRIGMTGISLGGHFAP
RAVAYEPRFASGAVWGANHNWREVQDKRLKREGENPVPHYWAHVMWAFGASDMDDFMVKSEDMNLNGHMDRIKVPFLVTH
GADDRQISVSYADDLYDQLVNSPRREKVIFTAREGGVEHVGADNMAYGRDCIADWFAETLGGTTA

Sequences:

>Translated_385_residues
MALYEPFPNYIWNLSVSIAMESGGQIGEIVDMCQPIIDAASNGGDAGTPQFMKQWAAYGDKLIALAAEDEARGRMFSASN
KLERASLYLLVAERMQGHGAPGRKESYAKARDAFDKSTALGKINRERVEIPLGKGTMPALYTRAPGNGPHPVVVYCNGLD
SCKELLYWSRLPEALARRGISTICVDQPGSGEALRLQDLPVDPHSENWASKAVDWLEQQPDVDPKRIGMTGISLGGHFAP
RAVAYEPRFASGAVWGANHNWREVQDKRLKREGENPVPHYWAHVMWAFGASDMDDFMVKSEDMNLNGHMDRIKVPFLVTH
GADDRQISVSYADDLYDQLVNSPRREKVIFTAREGGVEHVGADNMAYGRDCIADWFAETLGGTTA
>Mature_384_residues
ALYEPFPNYIWNLSVSIAMESGGQIGEIVDMCQPIIDAASNGGDAGTPQFMKQWAAYGDKLIALAAEDEARGRMFSASNK
LERASLYLLVAERMQGHGAPGRKESYAKARDAFDKSTALGKINRERVEIPLGKGTMPALYTRAPGNGPHPVVVYCNGLDS
CKELLYWSRLPEALARRGISTICVDQPGSGEALRLQDLPVDPHSENWASKAVDWLEQQPDVDPKRIGMTGISLGGHFAPR
AVAYEPRFASGAVWGANHNWREVQDKRLKREGENPVPHYWAHVMWAFGASDMDDFMVKSEDMNLNGHMDRIKVPFLVTHG
ADDRQISVSYADDLYDQLVNSPRREKVIFTAREGGVEHVGADNMAYGRDCIADWFAETLGGTTA

Specific function: L-nicotine is used as a growth substrate. Plays a role in nicotine catabolism by cleaving a C-C bond in 2,6- dihydroxypseudooxyicotine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0255 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010520 [H]

Pfam domain/function: PF06500 DUF1100 [H]

EC number: NA

Molecular weight: Translated: 42503; Mature: 42372

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS00560 CARBOXYPEPT_SER_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALYEPFPNYIWNLSVSIAMESGGQIGEIVDMCQPIIDAASNGGDAGTPQFMKQWAAYGD
CCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC
KLIALAAEDEARGRMFSASNKLERASLYLLVAERMQGHGAPGRKESYAKARDAFDKSTAL
EEEEEECCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
GKINRERVEIPLGKGTMPALYTRAPGNGPHPVVVYCNGLDSCKELLYWSRLPEALARRGI
CCCCCCEEEEECCCCCCCEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCC
STICVDQPGSGEALRLQDLPVDPHSENWASKAVDWLEQQPDVDPKRIGMTGISLGGHFAP
CEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCEEECCCCCCCC
RAVAYEPRFASGAVWGANHNWREVQDKRLKREGENPVPHYWAHVMWAFGASDMDDFMVKS
CEEEECCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHEEC
EDMNLNGHMDRIKVPFLVTHGADDRQISVSYADDLYDQLVNSPRREKVIFTAREGGVEHV
CCCCCCCCCCEEEEEEEEECCCCCCEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
GADNMAYGRDCIADWFAETLGGTTA
CCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ALYEPFPNYIWNLSVSIAMESGGQIGEIVDMCQPIIDAASNGGDAGTPQFMKQWAAYGD
CCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC
KLIALAAEDEARGRMFSASNKLERASLYLLVAERMQGHGAPGRKESYAKARDAFDKSTAL
EEEEEECCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
GKINRERVEIPLGKGTMPALYTRAPGNGPHPVVVYCNGLDSCKELLYWSRLPEALARRGI
CCCCCCEEEEECCCCCCCEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCC
STICVDQPGSGEALRLQDLPVDPHSENWASKAVDWLEQQPDVDPKRIGMTGISLGGHFAP
CEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCEEECCCCCCCC
RAVAYEPRFASGAVWGANHNWREVQDKRLKREGENPVPHYWAHVMWAFGASDMDDFMVKS
CEEEECCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHEEC
EDMNLNGHMDRIKVPFLVTHGADDRQISVSYADDLYDQLVNSPRREKVIFTAREGGVEHV
CCCCCCCCCCEEEEEEEEECCCCCCEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
GADNMAYGRDCIADWFAETLGGTTA
CCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11514508; 12618462 [H]