The gene/protein map for NC_007794 is currently unavailable.
Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is tyrC [H]

Identifier: 87198720

GI number: 87198720

Start: 735701

End: 736654

Strand: Direct

Name: tyrC [H]

Synonym: Saro_0696

Alternate gene names: 87198720

Gene position: 735701-736654 (Clockwise)

Preceding gene: 87198719

Following gene: 87198726

Centisome position: 20.66

GC content: 68.34

Gene sequence:

>954_bases
GTGACGGGCGCTTCGTTCGGACAGGTTACCATCGTGGGCCTGGGCCTGCTTGGCGGGTCGATCGGACATGCGGTGCAGGC
TTACCTGCCAGGCACGACGGTAGTTGGCTATGACGCCGATCCCGACGTGCGCGAGGCCGCGCGCGGGCTGGGTCTTGCCC
ACCGCATTGCCGACGAAGCGGGCGAAGCGGCGATCGGATCCGACCTCGTGATCTTCTGCGTGCCGGTGGGCGCGATGGGC
GCTGCCGCGGCCGCGATAGCGCCCGGCCTGTCGGTCGAAGCGCTGGTGAGCGACGTGGGCTCTTCGAAGGCGACTGTCGC
CGCCGCGCTGGCTCAGGCGCTGCCGGGACATCACGTGATTCCCGCCCACCCCGTCGCGGGGACCGAGCGGAGCGGGCCGG
AGGCCGGCTTTGCCGCGCTGTTCCGCAACCGCTGGTGCATCATCACTCCGCCCGCAGACGCCGACCCTGTGCTGTTGGCG
CGGCTTGTGGCTTTCTGGGAAGCGCTCGGCGCGCGGGTCGAGACGATGGACGCGGACCATCACGACAAGGTCCTTGCGGT
CACCAGTCACCTGCCGCACCTTATTGCCTATACCATCGTCGGCACGGCCTCGGACCTCGAGCAGGTGACCCAGAGCGAGG
TCATCAAGTACTCGGCCGGCGGCTTCCGCGACTTCACCCGCATCGCCGCTTCGGACCCGACGATGTGGCGCGACGTGTTC
CTGACGAACCGCGAAGCGGTGCTGGAGATGCTCCAGCGCTTCACCGAGGACCTGACCGAACTGCAGAAGGCCATCCGCAA
GGGCGATGGTGCGTTCCTGTTCGATCACTTCACCCGCACCCGTGCGATCCGCCGTGGCATCATCGAGATGGGCCAGGACG
ATGCGCGGCCCGACTTCGGCCGCAGCGACCATAATGGAGACGGCCAGGGAAGCGGCGGCGGGGAACCTGCCTAG

Upstream 100 bases:

>100_bases
CGGGGCAGGGCCTGCCCCAGGCGCTGCGCATCACCATAGGCACCGAGGCGCAGATGGACGAGATCGCCGATGCCATCCGC
CGGATGTGCGAGGCTGCACG

Downstream 100 bases:

>100_bases
ACAGCGATGAACAGCAGGGCGACGAAGGTCATCACGGCCGTCGACGCCCAGCCGCCAAAAGCGAGGCCGCCGGAAATCGT
GAGGTCGCCCATGATCTTGC

Product: cyclohexadienyl dehydrogenase

Products: NA

Alternate protein names: Arogenate dehydrogenase; ADH; Cyclohexadienyl dehydrogenase; Prephenate dehydrogenase; PDH [H]

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MTGASFGQVTIVGLGLLGGSIGHAVQAYLPGTTVVGYDADPDVREAARGLGLAHRIADEAGEAAIGSDLVIFCVPVGAMG
AAAAAIAPGLSVEALVSDVGSSKATVAAALAQALPGHHVIPAHPVAGTERSGPEAGFAALFRNRWCIITPPADADPVLLA
RLVAFWEALGARVETMDADHHDKVLAVTSHLPHLIAYTIVGTASDLEQVTQSEVIKYSAGGFRDFTRIAASDPTMWRDVF
LTNREAVLEMLQRFTEDLTELQKAIRKGDGAFLFDHFTRTRAIRRGIIEMGQDDARPDFGRSDHNGDGQGSGGGEPA

Sequences:

>Translated_317_residues
MTGASFGQVTIVGLGLLGGSIGHAVQAYLPGTTVVGYDADPDVREAARGLGLAHRIADEAGEAAIGSDLVIFCVPVGAMG
AAAAAIAPGLSVEALVSDVGSSKATVAAALAQALPGHHVIPAHPVAGTERSGPEAGFAALFRNRWCIITPPADADPVLLA
RLVAFWEALGARVETMDADHHDKVLAVTSHLPHLIAYTIVGTASDLEQVTQSEVIKYSAGGFRDFTRIAASDPTMWRDVF
LTNREAVLEMLQRFTEDLTELQKAIRKGDGAFLFDHFTRTRAIRRGIIEMGQDDARPDFGRSDHNGDGQGSGGGEPA
>Mature_316_residues
TGASFGQVTIVGLGLLGGSIGHAVQAYLPGTTVVGYDADPDVREAARGLGLAHRIADEAGEAAIGSDLVIFCVPVGAMGA
AAAAIAPGLSVEALVSDVGSSKATVAAALAQALPGHHVIPAHPVAGTERSGPEAGFAALFRNRWCIITPPADADPVLLAR
LVAFWEALGARVETMDADHHDKVLAVTSHLPHLIAYTIVGTASDLEQVTQSEVIKYSAGGFRDFTRIAASDPTMWRDVFL
TNREAVLEMLQRFTEDLTELQKAIRKGDGAFLFDHFTRTRAIRRGIIEMGQDDARPDFGRSDHNGDGQGSGGGEPA

Specific function: Is competent to function as either prephenate dehydrogenase or as arogenate dehydrogenase [H]

COG id: COG0287

COG function: function code E; Prephenate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]

Homologues:

None

Paralogues:

None

Copy number: 500 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR016040
- InterPro:   IPR003099 [H]

Pfam domain/function: PF02153 PDH [H]

EC number: =1.3.1.43; =1.3.1.12 [H]

Molecular weight: Translated: 33183; Mature: 33052

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGASFGQVTIVGLGLLGGSIGHAVQAYLPGTTVVGYDADPDVREAARGLGLAHRIADEA
CCCCCCCCEEEEEHHHHCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHH
GEAAIGSDLVIFCVPVGAMGAAAAAIAPGLSVEALVSDVGSSKATVAAALAQALPGHHVI
CCCCCCCCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
PAHPVAGTERSGPEAGFAALFRNRWCIITPPADADPVLLARLVAFWEALGARVETMDADH
CCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCC
HDKVLAVTSHLPHLIAYTIVGTASDLEQVTQSEVIKYSAGGFRDFTRIAASDPTMWRDVF
CCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHH
LTNREAVLEMLQRFTEDLTELQKAIRKGDGAFLFDHFTRTRAIRRGIIEMGQDDARPDFG
HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCC
RSDHNGDGQGSGGGEPA
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TGASFGQVTIVGLGLLGGSIGHAVQAYLPGTTVVGYDADPDVREAARGLGLAHRIADEA
CCCCCCCEEEEEHHHHCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHH
GEAAIGSDLVIFCVPVGAMGAAAAAIAPGLSVEALVSDVGSSKATVAAALAQALPGHHVI
CCCCCCCCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
PAHPVAGTERSGPEAGFAALFRNRWCIITPPADADPVLLARLVAFWEALGARVETMDADH
CCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCC
HDKVLAVTSHLPHLIAYTIVGTASDLEQVTQSEVIKYSAGGFRDFTRIAASDPTMWRDVF
CCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHH
LTNREAVLEMLQRFTEDLTELQKAIRKGDGAFLFDHFTRTRAIRRGIIEMGQDDARPDFG
HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCC
RSDHNGDGQGSGGGEPA
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7916685 [H]