Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is hisC
Identifier: 87198719
GI number: 87198719
Start: 734586
End: 735704
Strand: Direct
Name: hisC
Synonym: Saro_0695
Alternate gene names: 87198719
Gene position: 734586-735704 (Clockwise)
Preceding gene: 87198718
Following gene: 87198720
Centisome position: 20.63
GC content: 65.15
Gene sequence:
>1119_bases ATGGCAAACGCTCCGCAACTCCCGGCATCTCCTCAGCCCAAGGACTGGATCCTCGGCATTCACGCCTATGTCCCCGGCAA GTCGACCGGCAAGGACGGGCAGGTGCTGACCAAGCTGTCGGCGAACGAAAATCCGCTCGGGACAAGCGCCGCCGCGCTCG AAGCGCGGGCACATGCGGGCGATCCGGCGCGCTATCCTGATCCTGACAGCAAGGATCTTCGCGCCGCCATCGGCGAAGTC CACGGCATCGATCCATCCCGGATCGTCATGGGCACCGGTTCTGACGAACTGCTCAACCTGGCCGCGCAGGCCTATGCCGG CCCCGGCGATGAAGTGCTCTACGTGCGCTACGGCTTCTCGGTCTACGACATCGCCGCGCGCCGCTGCGGGGCAGTGCCTG TCGTTGCGCCCGACGCCGATTACGGCACCGATGTCGATGCGCTGCTCGCCTGCGTGACCGAGCGTACGCGCGTCGTCTTC CTTGCCAATCCGAACAACCCGACTGGAAGCTGGTTGCCCCGCGAAGAGGTTGCGCGGCTCCACGCGGGTCTGCGCTCCGA CATCCTGCTGGTACTCGACGGTGCCTACGCCGAGTACCTTGATCCGGCGAACGATGATGGCGCCCTCGACCTGGCGGTCA CCGCCTGCAACGTTCTGGTCACGCGCACGTTTTCAAAGATATACGGCCTTGCCGGGGAGCGTATTGGCTGGGGCACCGGC CATCCGGCCATTGTCGATATGCTCAATCGGATTCGCGGTCCTTTCAACATCTCGCTGACCGGACAGGCTGCAGGCCTTGC CGCTGTTCGCGATCAGGCCTTTGTTGAAGCCTCGCGCCGCCACAACGCACATCAGCGCACGCGGTTCGTCGGCAAGCTCG AAGCCCTCGGCAATCACGGCGTCCGCCCGTTGCCCAGCCAGGCGAACTTCGTGCTGATCCTGTTCGAGGGCAAGGTGACT GCCGAAGACGTTTACCTCGGCCTCATGGACTACGGCTACATCACCCGCTGGCTGCCGGGGCAGGGCCTGCCCCAGGCGCT GCGCATCACCATAGGCACCGAGGCGCAGATGGACGAGATCGCCGATGCCATCCGCCGGATGTGCGAGGCTGCACGGTGA
Upstream 100 bases:
>100_bases AGACTGAAGGCCGGAAGCGCTAGCCCGCTTCCGGCCCTTTTTTGGTGAGGCCGGTGCCATTGCCTTGCCGGGAACCCCCA CAAACTCTAAGGCGCGGGCC
Downstream 100 bases:
>100_bases CGGGCGCTTCGTTCGGACAGGTTACCATCGTGGGCCTGGGCCTGCTTGGCGGGTCGATCGGACATGCGGTGCAGGCTTAC CTGCCAGGCACGACGGTAGT
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MANAPQLPASPQPKDWILGIHAYVPGKSTGKDGQVLTKLSANENPLGTSAAALEARAHAGDPARYPDPDSKDLRAAIGEV HGIDPSRIVMGTGSDELLNLAAQAYAGPGDEVLYVRYGFSVYDIAARRCGAVPVVAPDADYGTDVDALLACVTERTRVVF LANPNNPTGSWLPREEVARLHAGLRSDILLVLDGAYAEYLDPANDDGALDLAVTACNVLVTRTFSKIYGLAGERIGWGTG HPAIVDMLNRIRGPFNISLTGQAAGLAAVRDQAFVEASRRHNAHQRTRFVGKLEALGNHGVRPLPSQANFVLILFEGKVT AEDVYLGLMDYGYITRWLPGQGLPQALRITIGTEAQMDEIADAIRRMCEAAR
Sequences:
>Translated_372_residues MANAPQLPASPQPKDWILGIHAYVPGKSTGKDGQVLTKLSANENPLGTSAAALEARAHAGDPARYPDPDSKDLRAAIGEV HGIDPSRIVMGTGSDELLNLAAQAYAGPGDEVLYVRYGFSVYDIAARRCGAVPVVAPDADYGTDVDALLACVTERTRVVF LANPNNPTGSWLPREEVARLHAGLRSDILLVLDGAYAEYLDPANDDGALDLAVTACNVLVTRTFSKIYGLAGERIGWGTG HPAIVDMLNRIRGPFNISLTGQAAGLAAVRDQAFVEASRRHNAHQRTRFVGKLEALGNHGVRPLPSQANFVLILFEGKVT AEDVYLGLMDYGYITRWLPGQGLPQALRITIGTEAQMDEIADAIRRMCEAAR >Mature_371_residues ANAPQLPASPQPKDWILGIHAYVPGKSTGKDGQVLTKLSANENPLGTSAAALEARAHAGDPARYPDPDSKDLRAAIGEVH GIDPSRIVMGTGSDELLNLAAQAYAGPGDEVLYVRYGFSVYDIAARRCGAVPVVAPDADYGTDVDALLACVTERTRVVFL ANPNNPTGSWLPREEVARLHAGLRSDILLVLDGAYAEYLDPANDDGALDLAVTACNVLVTRTFSKIYGLAGERIGWGTGH PAIVDMLNRIRGPFNISLTGQAAGLAAVRDQAFVEASRRHNAHQRTRFVGKLEALGNHGVRPLPSQANFVLILFEGKVTA EDVYLGLMDYGYITRWLPGQGLPQALRITIGTEAQMDEIADAIRRMCEAAR
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=357, Percent_Identity=25.2100840336134, Blast_Score=104, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6322075, Length=347, Percent_Identity=26.5129682997118, Blast_Score=100, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS8_NOVAD (Q2GAI1)
Other databases:
- EMBL: CP000248 - RefSeq: YP_495976.1 - ProteinModelPortal: Q2GAI1 - SMR: Q2GAI1 - STRING: Q2GAI1 - GeneID: 3918518 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_0695 - NMPDR: fig|48935.1.peg.1934 - eggNOG: COG0079 - HOGENOM: HBG646350 - OMA: YDIAARR - ProtClustDB: PRK02731 - BioCyc: NARO279238:SARO_0695-MONOMER - HAMAP: MF_01023 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 39832; Mature: 39700
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANAPQLPASPQPKDWILGIHAYVPGKSTGKDGQVLTKLSANENPLGTSAAALEARAHAG CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCC DPARYPDPDSKDLRAAIGEVHGIDPSRIVMGTGSDELLNLAAQAYAGPGDEVLYVRYGFS CCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCH VYDIAARRCGAVPVVAPDADYGTDVDALLACVTERTRVVFLANPNNPTGSWLPREEVARL HHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHH HAGLRSDILLVLDGAYAEYLDPANDDGALDLAVTACNVLVTRTFSKIYGLAGERIGWGTG HCCCCCCEEEEEECCHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC HPAIVDMLNRIRGPFNISLTGQAAGLAAVRDQAFVEASRRHNAHQRTRFVGKLEALGNHG CHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC VRPLPSQANFVLILFEGKVTAEDVYLGLMDYGYITRWLPGQGLPQALRITIGTEAQMDEI CCCCCCCCCEEEEEEECCEEHHHHEEHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHH ADAIRRMCEAAR HHHHHHHHHHCC >Mature Secondary Structure ANAPQLPASPQPKDWILGIHAYVPGKSTGKDGQVLTKLSANENPLGTSAAALEARAHAG CCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCC DPARYPDPDSKDLRAAIGEVHGIDPSRIVMGTGSDELLNLAAQAYAGPGDEVLYVRYGFS CCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCH VYDIAARRCGAVPVVAPDADYGTDVDALLACVTERTRVVFLANPNNPTGSWLPREEVARL HHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHH HAGLRSDILLVLDGAYAEYLDPANDDGALDLAVTACNVLVTRTFSKIYGLAGERIGWGTG HCCCCCCEEEEEECCHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC HPAIVDMLNRIRGPFNISLTGQAAGLAAVRDQAFVEASRRHNAHQRTRFVGKLEALGNHG CHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC VRPLPSQANFVLILFEGKVTAEDVYLGLMDYGYITRWLPGQGLPQALRITIGTEAQMDEI CCCCCCCCCEEEEEEECCEEHHHHEEHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHH ADAIRRMCEAAR HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA