Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198726
Identifier: 87198726
GI number: 87198726
Start: 741015
End: 741899
Strand: Direct
Name: 87198726
Synonym: Saro_0702
Alternate gene names: NA
Gene position: 741015-741899 (Clockwise)
Preceding gene: 87198720
Following gene: 87198729
Centisome position: 20.81
GC content: 68.93
Gene sequence:
>885_bases ATGATCATTGCGTGCCCAGCCTGCTCGACGCGCTATGTCGTTCCCGACAGTGCGATCGGCGTGGACGGCAGGACCGTGCG GTGCGCGCGGTGCCGCCATTCGTGGTTTCAGAACGGACCTGAACTGCCTCCGCGAGCCGAAGCTGCTCCGCTTGCAGATG TGCCGCCGGCTGCGCAGCCTGCCGATAGTGGGGCGCAAACGGTTCAGGCAGCGGTGGCGGAGCCTGCCCCGGCACCGGCC TCGTCCCCGTCCCCAAGGGAGCCGGAACCTGCCGCTCCCATCCGGGCGGTCGCGACCGAGGCGGAAGGCGCGCCTGCCTA TGCTGCAGCCGCTCAGGCGGCCGAACAGGAACCGCCGACCCCTCCACCGCTGCCGCACGCAATGCGGCGCACTGCGGCGC CTGTCGCACCGGTCGAGGATGCGTCGCCCTTCGATCATCAGCCGCCTTTCCGGCCGCGCCGCAATCCGACGAAGATGTGG ACGATCGCCGCCGTGGCTTTCGCGCTGACGCTTGCCGGGCTCGGCGGTGCGGCATGGTACTTCGGCCTGCCCCAATGGTT GCCCGGTGCCGGCCAGACCTTCGGGGCGGATCGCCCGGATCTGGAGCTGTCGTTCCCGCCCGAGAAGCAGGATCGTCGCC AGTTGCCCAATGGCACCGAGTATTTCGGCGCCAGCGGCATGGTCACCAATACCGGCAAGGCCGTGCGCGCGTTGCCTGCG ATCCTGATCGTGCTGCGCGATTCGCGCGACAAGGTGGTGAAGACCTGGGAAGTGCCGCCGCCGCAGGACGAACTGGCCCC GGGCGAGAGCGTGACGATCAACGCTGCTGTGACCGACGTCCCTAGGTCGGCGAAGGTTGCGGAGATCGGCTGGAAGCCGG ATTGA
Upstream 100 bases:
>100_bases GGGCTATAGGCCGCAATCCATGTGGAAAAAAGGCCGTTGGAGCGTTTCTTCCATACACGGCCTATTGTTTCGACAGGCAC GGCCATGCTTAACCCGAAGC
Downstream 100 bases:
>100_bases TCCCGTAAACTTTCAAGGCATCGAGAAAAAAGTCTCGATCCTTGTTGCGCCCCGCAAACTCCTTTGCTAGGGGCGCGCTC CTACCCCCCACGGGGAGCCT
Product: Zinc finger/thioredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MIIACPACSTRYVVPDSAIGVDGRTVRCARCRHSWFQNGPELPPRAEAAPLADVPPAAQPADSGAQTVQAAVAEPAPAPA SSPSPREPEPAAPIRAVATEAEGAPAYAAAAQAAEQEPPTPPPLPHAMRRTAAPVAPVEDASPFDHQPPFRPRRNPTKMW TIAAVAFALTLAGLGGAAWYFGLPQWLPGAGQTFGADRPDLELSFPPEKQDRRQLPNGTEYFGASGMVTNTGKAVRALPA ILIVLRDSRDKVVKTWEVPPPQDELAPGESVTINAAVTDVPRSAKVAEIGWKPD
Sequences:
>Translated_294_residues MIIACPACSTRYVVPDSAIGVDGRTVRCARCRHSWFQNGPELPPRAEAAPLADVPPAAQPADSGAQTVQAAVAEPAPAPA SSPSPREPEPAAPIRAVATEAEGAPAYAAAAQAAEQEPPTPPPLPHAMRRTAAPVAPVEDASPFDHQPPFRPRRNPTKMW TIAAVAFALTLAGLGGAAWYFGLPQWLPGAGQTFGADRPDLELSFPPEKQDRRQLPNGTEYFGASGMVTNTGKAVRALPA ILIVLRDSRDKVVKTWEVPPPQDELAPGESVTINAAVTDVPRSAKVAEIGWKPD >Mature_294_residues MIIACPACSTRYVVPDSAIGVDGRTVRCARCRHSWFQNGPELPPRAEAAPLADVPPAAQPADSGAQTVQAAVAEPAPAPA SSPSPREPEPAAPIRAVATEAEGAPAYAAAAQAAEQEPPTPPPLPHAMRRTAAPVAPVEDASPFDHQPPFRPRRNPTKMW TIAAVAFALTLAGLGGAAWYFGLPQWLPGAGQTFGADRPDLELSFPPEKQDRRQLPNGTEYFGASGMVTNTGKAVRALPA ILIVLRDSRDKVVKTWEVPPPQDELAPGESVTINAAVTDVPRSAKVAEIGWKPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30935; Mature: 30935
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIACPACSTRYVVPDSAIGVDGRTVRCARCRHSWFQNGPELPPRAEAAPLADVPPAAQP CEEECCCCCCEEECCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC ADSGAQTVQAAVAEPAPAPASSPSPREPEPAAPIRAVATEAEGAPAYAAAAQAAEQEPPT CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCC PPPLPHAMRRTAAPVAPVEDASPFDHQPPFRPRRNPTKMWTIAAVAFALTLAGLGGAAWY CCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH FGLPQWLPGAGQTFGADRPDLELSFPPEKQDRRQLPNGTEYFGASGMVTNTGKAVRALPA HCCHHHCCCCCCCCCCCCCCCEEECCCCHHHHHCCCCCCHHCCCCCCEECCCHHHHHHHH ILIVLRDSRDKVVKTWEVPPPQDELAPGESVTINAAVTDVPRSAKVAEIGWKPD EEEEEECCCCCEEEEECCCCCHHHCCCCCCEEEEEEECCCCCCCEEEECCCCCC >Mature Secondary Structure MIIACPACSTRYVVPDSAIGVDGRTVRCARCRHSWFQNGPELPPRAEAAPLADVPPAAQP CEEECCCCCCEEECCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC ADSGAQTVQAAVAEPAPAPASSPSPREPEPAAPIRAVATEAEGAPAYAAAAQAAEQEPPT CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCC PPPLPHAMRRTAAPVAPVEDASPFDHQPPFRPRRNPTKMWTIAAVAFALTLAGLGGAAWY CCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH FGLPQWLPGAGQTFGADRPDLELSFPPEKQDRRQLPNGTEYFGASGMVTNTGKAVRALPA HCCHHHCCCCCCCCCCCCCCCEEECCCCHHHHHCCCCCCHHCCCCCCEECCCHHHHHHHH ILIVLRDSRDKVVKTWEVPPPQDELAPGESVTINAAVTDVPRSAKVAEIGWKPD EEEEEECCCCCEEEEECCCCCHHHCCCCCCEEEEEEECCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA