Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
---|---|
Accession | NC_007794 |
Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is mviN [H]
Identifier: 87198611
GI number: 87198611
Start: 632025
End: 633596
Strand: Direct
Name: mviN [H]
Synonym: Saro_0587
Alternate gene names: 87198611
Gene position: 632025-633596 (Clockwise)
Preceding gene: 87198610
Following gene: 87198612
Centisome position: 17.75
GC content: 67.81
Gene sequence:
>1572_bases GTGAACCTCCTCAAGGCCACCGGCACGATCGGCGGGCTGACCCTGCTCAGCCGCGTGCTCGGCCTCGTGCGCGACAGCCT GTTCGCGCGCTTCATCGGTGCGAGCTTTGCCTCGGACGCGTTCCTTGTCGCGTTCAGGCTGCCCAACATGTTCCGCGCCC TCTTCGCCGAGGGCGCTTTCGCATCGGCGTTCATCCCGATGTTCAACAAGCGCGTGGCGGACCCGGAAGGGAACGGCCTG CGCGACGGGCTCGACTTTGCCGAAGCGGCGCTCGCGGTGCTGCTGCCCGTGTTGATCGTGATGACCGTGCTGCTCGAGGT CTTTGCCTGGCCGGTCACGTTCGTGCTTTCGGGCAAGTTCAACGGCGTAAGTGCCGACCAGTTCGCCTATGCGGTGGAAC TGTCGCGCTGGACGATCCCTTACCTCATGCTGATCAGCCTCGTCTCGCTGTTCGGCGGCATCCTCAACTCGCTGCACAAG TTCTGGGTCAACGCGGCCGCGCCCATCCTCCTGAACCTCACGCTGATCGCGGCGCTGCTGGGCTTCCATTCGGACGATCC GCTGGTGACCGCGCGCAACCAGGCCATAGCGGTGTCGGTTTCGGGTGCGCTCCAGCTGTTCTGGCTGGCCTGGGCCTGCC GGCGCAATGGCGTGCGCCTCAGGCTGCGACGCCCGCGCCTCTCGCCCGAGGTCAAGCAACTGCTCAAGCTGATCTGGCCG GCGGCGGCGGGCGCGGGGGCGGTGCAGATCAACCTCGTGATCTCGACCGCGCTGGCTGCATCGCTGCTCGACCACGGCAG CGTGACCTACATCTACATGGCCGACCGGCTCAACCAGCTGCCGCTCGGCCTGATCGGCATCGGTCTTGGCACGGTGCTGC TGCCGACCATCTCGCGCCAGCTGGGCGGGGGCGAGGACGCAGCGGCGATGGAGACGCAGAACCGGGGCATGGAACTGGCG CTGCTGCTGACCCTGCCCGCCACGGTCGCGCTCGTGCTGTGCGGCGAACCGATCGCCGCTGCACTGTTCGGCTATGGCAA GTTCGATGCGCTCGACACGCACTATACCGCGCAGGCGCTCGCCGCCTTCTCGATCGGCCTGCCGAGCTACATCCTGGTCA AGGTGCTGACGCCCGGCTTCTATGCGCGGCAGGACACGAAGACACCGGTTCGCTTCGCCACGATCTCGATGGTGGTGAAC CTTGTCGGCAACCTCGCGCTGATCGTTCCGCTGCGGCACATGGGGCCGCCGCTGGCAACGGCAATCGCCTCGACCGTCAA TGTCTGGCTGCTCTATCGCACGCTGGTGAAGCGCGGGCACTTCGTGGCCGATGCGCGGCTCAGGCGCCGGGCCTGGCGGC TTGCGCTGGCGGCCGCCGCGATGGGCGGCATGCTGTGGGCAGGGCAGGGACTGGTCATGCCGTGGGTCCACGGCACCTGG ACCGTGCGCATCGCCGCGATGGGCGGACTGGTCACTGCGGGGGTGGTCGTCTATGGGCTAGCCGCCGTCCTGACCGGGGC TTTCCGGGCAGGCGACCTCAAGCTTCTCCTGCGGCGCGGCCGCACCAACTGA
Upstream 100 bases:
>100_bases CGGTCTCTACATGCAGCAGCTCGCGCAGGCCCAGGCGACCGCCGAGGCGACCCCCGCAGGCGAAGCGTAAGCAGATCCCG GTGGCCTTGAAGGACCGGAC
Downstream 100 bases:
>100_bases AGGCAAGCAGAATGCGTATCGTTTCCGGTATCCAGCCCACGGGCAATCTCCACCTCGGCAACTACCTGGGTGCGATCCGG AACTGGGTGCGCATGCAGGA
Product: integral membrane protein MviN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MNLLKATGTIGGLTLLSRVLGLVRDSLFARFIGASFASDAFLVAFRLPNMFRALFAEGAFASAFIPMFNKRVADPEGNGL RDGLDFAEAALAVLLPVLIVMTVLLEVFAWPVTFVLSGKFNGVSADQFAYAVELSRWTIPYLMLISLVSLFGGILNSLHK FWVNAAAPILLNLTLIAALLGFHSDDPLVTARNQAIAVSVSGALQLFWLAWACRRNGVRLRLRRPRLSPEVKQLLKLIWP AAAGAGAVQINLVISTALAASLLDHGSVTYIYMADRLNQLPLGLIGIGLGTVLLPTISRQLGGGEDAAAMETQNRGMELA LLLTLPATVALVLCGEPIAAALFGYGKFDALDTHYTAQALAAFSIGLPSYILVKVLTPGFYARQDTKTPVRFATISMVVN LVGNLALIVPLRHMGPPLATAIASTVNVWLLYRTLVKRGHFVADARLRRRAWRLALAAAAMGGMLWAGQGLVMPWVHGTW TVRIAAMGGLVTAGVVVYGLAAVLTGAFRAGDLKLLLRRGRTN
Sequences:
>Translated_523_residues MNLLKATGTIGGLTLLSRVLGLVRDSLFARFIGASFASDAFLVAFRLPNMFRALFAEGAFASAFIPMFNKRVADPEGNGL RDGLDFAEAALAVLLPVLIVMTVLLEVFAWPVTFVLSGKFNGVSADQFAYAVELSRWTIPYLMLISLVSLFGGILNSLHK FWVNAAAPILLNLTLIAALLGFHSDDPLVTARNQAIAVSVSGALQLFWLAWACRRNGVRLRLRRPRLSPEVKQLLKLIWP AAAGAGAVQINLVISTALAASLLDHGSVTYIYMADRLNQLPLGLIGIGLGTVLLPTISRQLGGGEDAAAMETQNRGMELA LLLTLPATVALVLCGEPIAAALFGYGKFDALDTHYTAQALAAFSIGLPSYILVKVLTPGFYARQDTKTPVRFATISMVVN LVGNLALIVPLRHMGPPLATAIASTVNVWLLYRTLVKRGHFVADARLRRRAWRLALAAAAMGGMLWAGQGLVMPWVHGTW TVRIAAMGGLVTAGVVVYGLAAVLTGAFRAGDLKLLLRRGRTN >Mature_523_residues MNLLKATGTIGGLTLLSRVLGLVRDSLFARFIGASFASDAFLVAFRLPNMFRALFAEGAFASAFIPMFNKRVADPEGNGL RDGLDFAEAALAVLLPVLIVMTVLLEVFAWPVTFVLSGKFNGVSADQFAYAVELSRWTIPYLMLISLVSLFGGILNSLHK FWVNAAAPILLNLTLIAALLGFHSDDPLVTARNQAIAVSVSGALQLFWLAWACRRNGVRLRLRRPRLSPEVKQLLKLIWP AAAGAGAVQINLVISTALAASLLDHGSVTYIYMADRLNQLPLGLIGIGLGTVLLPTISRQLGGGEDAAAMETQNRGMELA LLLTLPATVALVLCGEPIAAALFGYGKFDALDTHYTAQALAAFSIGLPSYILVKVLTPGFYARQDTKTPVRFATISMVVN LVGNLALIVPLRHMGPPLATAIASTVNVWLLYRTLVKRGHFVADARLRRRAWRLALAAAAMGGMLWAGQGLVMPWVHGTW TVRIAAMGGLVTAGVVVYGLAAVLTGAFRAGDLKLLLRRGRTN
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=499, Percent_Identity=38.0761523046092, Blast_Score=295, Evalue=5e-81,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 56020; Mature: 56020
Theoretical pI: Translated: 10.94; Mature: 10.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLKATGTIGGLTLLSRVLGLVRDSLFARFIGASFASDAFLVAFRLPNMFRALFAEGAF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCH ASAFIPMFNKRVADPEGNGLRDGLDFAEAALAVLLPVLIVMTVLLEVFAWPVTFVLSGKF HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC NGVSADQFAYAVELSRWTIPYLMLISLVSLFGGILNSLHKFWVNAAAPILLNLTLIAALL CCCCHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFHSDDPLVTARNQAIAVSVSGALQLFWLAWACRRNGVRLRLRRPRLSPEVKQLLKLIWP CCCCCCCEEEECCCEEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH AAAGAGAVQINLVISTALAASLLDHGSVTYIYMADRLNQLPLGLIGIGLGTVLLPTISRQ CCCCCCEEEEEHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH LGGGEDAAAMETQNRGMELALLLTLPATVALVLCGEPIAAALFGYGKFDALDTHYTAQAL CCCCCCHHHHHHHCCCCEEEEEEHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHH AAFSIGLPSYILVKVLTPGFYARQDTKTPVRFATISMVVNLVGNLALIVPLRHMGPPLAT HHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEEEHHHCCCHHHH AIASTVNVWLLYRTLVKRGHFVADARLRRRAWRLALAAAAMGGMLWAGQGLVMPWVHGTW HHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEECCCCCEE TVRIAAMGGLVTAGVVVYGLAAVLTGAFRAGDLKLLLRRGRTN EEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC >Mature Secondary Structure MNLLKATGTIGGLTLLSRVLGLVRDSLFARFIGASFASDAFLVAFRLPNMFRALFAEGAF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCH ASAFIPMFNKRVADPEGNGLRDGLDFAEAALAVLLPVLIVMTVLLEVFAWPVTFVLSGKF HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC NGVSADQFAYAVELSRWTIPYLMLISLVSLFGGILNSLHKFWVNAAAPILLNLTLIAALL CCCCHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFHSDDPLVTARNQAIAVSVSGALQLFWLAWACRRNGVRLRLRRPRLSPEVKQLLKLIWP CCCCCCCEEEECCCEEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH AAAGAGAVQINLVISTALAASLLDHGSVTYIYMADRLNQLPLGLIGIGLGTVLLPTISRQ CCCCCCEEEEEHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH LGGGEDAAAMETQNRGMELALLLTLPATVALVLCGEPIAAALFGYGKFDALDTHYTAQAL CCCCCCHHHHHHHCCCCEEEEEEHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHH AAFSIGLPSYILVKVLTPGFYARQDTKTPVRFATISMVVNLVGNLALIVPLRHMGPPLAT HHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEEEHHHCCCHHHH AIASTVNVWLLYRTLVKRGHFVADARLRRRAWRLALAAAAMGGMLWAGQGLVMPWVHGTW HHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEECCCCCEE TVRIAAMGGLVTAGVVVYGLAAVLTGAFRAGDLKLLLRRGRTN EEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA