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The map label for this gene is secB [H]

Identifier: 87198610

GI number: 87198610

Start: 631524

End: 631994

Strand: Direct

Name: secB [H]

Synonym: Saro_0586

Alternate gene names: 87198610

Gene position: 631524-631994 (Clockwise)

Preceding gene: 87198609

Following gene: 87198611

Centisome position: 17.73

GC content: 64.76

Gene sequence:

>471_bases
GTGCCCAACGGTGCCGACACCTCGCCTGCGATCGGTCTGATCTCGCAGTACGTTAAGGACCTTTCGGTCGAGAATCCGAA
TGCGCCGGAAAGCTACCAGTGGGCCGAAGCGCCCGACATGGCGGTCGATTTCAACATCTCCGCGCGCGCGATCCAGCCCG
AAATCCACGAGATCGAGCTGAAGATCAACGTGACCTCCAAGGGCGCGCAGGGCACGGCGTTCATCGTCGAACTGGCGTAC
TGCGGCCTCATCGGCATGCGCAACGTGCCCGACGACCAGGCGCATCCGTTCCTGTTCGCCGAAGGCCCGCGCATTCTCTT
CCCGTTCGCCCGCCGCATCATCGCCGATGCCGTGCGCGATGCCGGTTACCCGCCGCTGATGCTCGAACCGATCGACTTCA
ACGGTCTCTACATGCAGCAGCTCGCGCAGGCCCAGGCGACCGCCGAGGCGACCCCCGCAGGCGAAGCGTAA

Upstream 100 bases:

>100_bases
ATGCTAGGCGCCCCGGTCAAGGGAAACCCGATCAGAAAGCAGTCCTACCATGGCCGACGAAGGCAACATCATCTCGAATC
TGAACCTTGAAGACGGTCCC

Downstream 100 bases:

>100_bases
GCAGATCCCGGTGGCCTTGAAGGACCGGACGTGAACCTCCTCAAGGCCACCGGCACGATCGGCGGGCTGACCCTGCTCAG
CCGCGTGCTCGGCCTCGTGC

Product: protein translocase subunit secB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MPNGADTSPAIGLISQYVKDLSVENPNAPESYQWAEAPDMAVDFNISARAIQPEIHEIELKINVTSKGAQGTAFIVELAY
CGLIGMRNVPDDQAHPFLFAEGPRILFPFARRIIADAVRDAGYPPLMLEPIDFNGLYMQQLAQAQATAEATPAGEA

Sequences:

>Translated_156_residues
MPNGADTSPAIGLISQYVKDLSVENPNAPESYQWAEAPDMAVDFNISARAIQPEIHEIELKINVTSKGAQGTAFIVELAY
CGLIGMRNVPDDQAHPFLFAEGPRILFPFARRIIADAVRDAGYPPLMLEPIDFNGLYMQQLAQAQATAEATPAGEA
>Mature_155_residues
PNGADTSPAIGLISQYVKDLSVENPNAPESYQWAEAPDMAVDFNISARAIQPEIHEIELKINVTSKGAQGTAFIVELAYC
GLIGMRNVPDDQAHPFLFAEGPRILFPFARRIIADAVRDAGYPPLMLEPIDFNGLYMQQLAQAQATAEATPAGEA

Specific function: One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its r

COG id: COG1952

COG function: function code U; Preprotein translocase subunit SecB

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secB family [H]

Homologues:

Organism=Escherichia coli, GI1790038, Length=127, Percent_Identity=33.0708661417323, Blast_Score=87, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003708 [H]

Pfam domain/function: PF02556 SecB [H]

EC number: NA

Molecular weight: Translated: 16887; Mature: 16756

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNGADTSPAIGLISQYVKDLSVENPNAPESYQWAEAPDMAVDFNISARAIQPEIHEIEL
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCEEEEEE
KINVTSKGAQGTAFIVELAYCGLIGMRNVPDDQAHPFLFAEGPRILFPFARRIIADAVRD
EEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEHHHHHHHHHHHHHHH
AGYPPLMLEPIDFNGLYMQQLAQAQATAEATPAGEA
CCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PNGADTSPAIGLISQYVKDLSVENPNAPESYQWAEAPDMAVDFNISARAIQPEIHEIEL
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCEEEEEE
KINVTSKGAQGTAFIVELAYCGLIGMRNVPDDQAHPFLFAEGPRILFPFARRIIADAVRD
EEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEHHHHHHHHHHHHHHH
AGYPPLMLEPIDFNGLYMQQLAQAQATAEATPAGEA
CCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA