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The map label for this gene is etfB [H]

Identifier: 87198481

GI number: 87198481

Start: 500603

End: 501355

Strand: Direct

Name: etfB [H]

Synonym: Saro_0456

Alternate gene names: 87198481

Gene position: 500603-501355 (Clockwise)

Preceding gene: 87198479

Following gene: 87198482

Centisome position: 14.06

GC content: 64.81

Gene sequence:

>753_bases
ATGAAGGCCCTGGTCTGCGTGAAGCGCGTGATTGACTACAACGTTAAGCCTCGAGTGAAGGCGGATGGTTCGGGTGTTGA
TCTTGCGAACGTGAAGATGAGCATGAACCCGTTTGACGAGATCGCGGTGGAAGAGGCCATTCGCCTGAAGGAGAAGGGCG
TTGTGACCGAGATCGTGGCGGTTTCGGTTGGGCCTGCGAAGGCGCAGGAGACGCTGCGCACGGCGCTTGCGATGGGGGCG
GACCGTGCGGTTCTGGTGCAGGTGGACGACGGGGTCGAGGTCGAGCCGCTGGCTGTGGCGAAGATCGTCAAGGGCATTGC
CGACGAGGAGCAGCCTGGCCTGATCATCACCGGCAAGCAGGCGATCGACGACGATTCGAACCAGGTCGGCCAGATGGTTG
CGGCGCTGCTGGGCCGTCCGCAGGGGACCTTTGCCAACGAGGTTTCGGTCGAAGGCGACGCGGTCGTGGTCAAGCGCGAG
ATCGACGGCGGCTTGCAGACGGTGCGCCTGGCGCTGCCCGCGGTGGTCACCACCGACCTGCGCCTGAACGAGCCGCGCTA
TGCCTCGCTGCCGAACATCATGAAGGCCAAGTCCAAGCCGCTCGCCAACAAGACCCCCGCCGATTACGGCGTGGACGTCG
CGGCGCGCCTCAAGACGCTGAAGGTCTCCGAACCGCCGGTCCGTTCGGCCGGGATCAAGGTGGCCGACGTCGACGCGCTC
GTCGCCAAGCTCAAGGAAATGGGAGTCGCCTGA

Upstream 100 bases:

>100_bases
GACAGCCCGTTCAATCCGCGCCATCGCCGACCCAAGCCGATGCCCCGATCGCGTTTCGACCATGGGCATCACAATGCCGG
ACACTATCAGGAGCGATGCC

Downstream 100 bases:

>100_bases
TGACCAAGGTTCTCGTTCTCGTCGAACACGACAACGCCAGCGTCAAGGACGCGACCCTTGCCGCCGTCACCGCCGCGGGC
CAGCTTGGCGAAGTGACCGC

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MKALVCVKRVIDYNVKPRVKADGSGVDLANVKMSMNPFDEIAVEEAIRLKEKGVVTEIVAVSVGPAKAQETLRTALAMGA
DRAVLVQVDDGVEVEPLAVAKIVKGIADEEQPGLIITGKQAIDDDSNQVGQMVAALLGRPQGTFANEVSVEGDAVVVKRE
IDGGLQTVRLALPAVVTTDLRLNEPRYASLPNIMKAKSKPLANKTPADYGVDVAARLKTLKVSEPPVRSAGIKVADVDAL
VAKLKEMGVA

Sequences:

>Translated_250_residues
MKALVCVKRVIDYNVKPRVKADGSGVDLANVKMSMNPFDEIAVEEAIRLKEKGVVTEIVAVSVGPAKAQETLRTALAMGA
DRAVLVQVDDGVEVEPLAVAKIVKGIADEEQPGLIITGKQAIDDDSNQVGQMVAALLGRPQGTFANEVSVEGDAVVVKRE
IDGGLQTVRLALPAVVTTDLRLNEPRYASLPNIMKAKSKPLANKTPADYGVDVAARLKTLKVSEPPVRSAGIKVADVDAL
VAKLKEMGVA
>Mature_250_residues
MKALVCVKRVIDYNVKPRVKADGSGVDLANVKMSMNPFDEIAVEEAIRLKEKGVVTEIVAVSVGPAKAQETLRTALAMGA
DRAVLVQVDDGVEVEPLAVAKIVKGIADEEQPGLIITGKQAIDDDSNQVGQMVAALLGRPQGTFANEVSVEGDAVVVKRE
IDGGLQTVRLALPAVVTTDLRLNEPRYASLPNIMKAKSKPLANKTPADYGVDVAARLKTLKVSEPPVRSAGIKVADVDAL
VAKLKEMGVA

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=250, Percent_Identity=59.6, Blast_Score=291, Evalue=3e-79,
Organism=Homo sapiens, GI62420877, Length=233, Percent_Identity=59.2274678111588, Blast_Score=271, Evalue=5e-73,
Organism=Escherichia coli, GI87081682, Length=234, Percent_Identity=28.2051282051282, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082158, Length=153, Percent_Identity=24.8366013071895, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI25141345, Length=252, Percent_Identity=55.952380952381, Blast_Score=253, Evalue=9e-68,
Organism=Saccharomyces cerevisiae, GI6321646, Length=252, Percent_Identity=46.8253968253968, Blast_Score=218, Evalue=9e-58,
Organism=Drosophila melanogaster, GI24651147, Length=250, Percent_Identity=58.8, Blast_Score=265, Evalue=2e-71,
Organism=Drosophila melanogaster, GI24651145, Length=250, Percent_Identity=58.8, Blast_Score=265, Evalue=2e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26396; Mature: 26396

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALVCVKRVIDYNVKPRVKADGSGVDLANVKMSMNPFDEIAVEEAIRLKEKGVVTEIVA
CHHHHHHHHHHCCCCCCCEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEE
VSVGPAKAQETLRTALAMGADRAVLVQVDDGVEVEPLAVAKIVKGIADEEQPGLIITGKQ
EECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEECCH
AIDDDSNQVGQMVAALLGRPQGTFANEVSVEGDAVVVKREIDGGLQTVRLALPAVVTTDL
HCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEEEECCCCHHHHHHHHHHHEEECE
RLNEPRYASLPNIMKAKSKPLANKTPADYGVDVAARLKTLKVSEPPVRSAGIKVADVDAL
EECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHEEECCCCCCHHCCEEEEHHHHH
VAKLKEMGVA
HHHHHHHCCC
>Mature Secondary Structure
MKALVCVKRVIDYNVKPRVKADGSGVDLANVKMSMNPFDEIAVEEAIRLKEKGVVTEIVA
CHHHHHHHHHHCCCCCCCEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEE
VSVGPAKAQETLRTALAMGADRAVLVQVDDGVEVEPLAVAKIVKGIADEEQPGLIITGKQ
EECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEECCH
AIDDDSNQVGQMVAALLGRPQGTFANEVSVEGDAVVVKREIDGGLQTVRLALPAVVTTDL
HCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEEEECCCCHHHHHHHHHHHEEECE
RLNEPRYASLPNIMKAKSKPLANKTPADYGVDVAARLKTLKVSEPPVRSAGIKVADVDAL
EECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHEEECCCCCCHHCCEEEEHHHHH
VAKLKEMGVA
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8599534; 12597275 [H]