| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is htpG
Identifier: 86751790
GI number: 86751790
Start: 5309442
End: 5311328
Strand: Reverse
Name: htpG
Synonym: RPB_4692
Alternate gene names: 86751790
Gene position: 5311328-5309442 (Counterclockwise)
Preceding gene: 86751791
Following gene: 86751789
Centisome position: 99.62
GC content: 65.02
Gene sequence:
>1887_bases ATGACCACGATTGATACCGCCAGCGAGACGAAGCCGTTCCAGGCCGAAGTGGCCGAGCTTTTGAACCTGATGGTGCACTC GGTCTATTCCGAGACCGACATCTTCCTGCGCGAGCTGATCTCCAACGCCTCCGACGCGCTCGACAAGCTGCGCTACGAAT CGATCGCCAATCCGGCGCTGATGGCGGACGGCGGCGAGCCGAAGATCCGGATCGTGCCGAAGAAAGCCCCGGATACGCTG ACCGTGATCGACAACGGCATCGGCATGGACCGCCAGGAGCTGATCGACAATCTCGGCACCATTGCCAAATCCGGCACCAA ATCGTTTCTGACCAAATTGACCGAGGCCAAGGACGGTGCCGGCCTGATCGGCCAGTTCGGCGTCGGCTTCTACGCCGCCT TCATGGTCGCCGACAGCATCACCGTCACCAGCCGCCGCGCCGGCTCGGCCGAGGCCTGGACCTGGTCGTCGTCGGGCGGC GCCGGCTTCGAGATCGCGCCGGCCTCCGAAGAGGCCGCGGCCCGTATCGAGCGCGGCACCGAGATCGTGCTGCATCTGAA GCCGGATGCGGCGAAATATCTCGAGGCCTATCAGATCGAGCGGATCGTCAGCGAGTACTCCGACAACATCCAGTTCCCGA TCGAGCTGGTGCCCGAAGACGGCGAGCCGCGCCAGATCAATTCGGCCAGCGCGTTGTGGCAGCGCTCGAAGTCCGAACTG ACCGAAGAGGACTACAAGCAGGCCTACAAGCAGGTCGCCGGCGCCTTCGACGAGCCGGCGATGACGCTGCATTATCGCGC CGAAGGCCGGCAGTCCTATGCGGTGCTGCTGTTCGCACCCTCGACGAAGCCGTTCGATCTGTTCGAGCCGGAGCGCAAGG GCCGCGTCAAGCTGTATGTCCGCCGCGTCTTCATCACCGCGGATGCCGATCTGTTGCCGCCTTATCTGCGCTTCCTGCGC GGCGTGATCGATTCGGAGGACCTGCCGCTGAATCTGTCGCGCGAGATGCTGCAGAACAATCCGCAGCTGGCGCAGATCCG CAAGGCGGTCACCGGCAAGGTGATCGGCGAACTCGACAGCCTCGCCGACAAGCAGCCCGAGCAATTCGCCAAGATCTGGG ACGCGTTCGGCCCGGTGATCAAGGAAGGTCTCTACGAGGATTACGAGCGCCGCGAGAAGCTGCTGTCGCTGGCGCGCTTC ACCACCACCGCCGGCGAGAAGCGCTCGCTCGCGCAATATGTCGAGGCGATGAAGGAGAACCAGACCGAGATCTACTATCT GGTCGGCGATTCGCTGGACCGCCTGAAGGCGAACCCGAAGCTCGAATCGGCCGCCGCGCGCGGCATCGAGGTGCTGCTGC TGACCGACGCGGTCGATGCGTTCTGGACTTCGGGCGGGCTCGATTTCGGCGGCAAGCCACTGAAGTCGCTGAGCCAGGGC GAGGTGAATTTCGACCTGATCCCGAAGCTCGACGCCGACAAGGCCGAGGACAAGCCGGACGAGGCCAAGGCCGACGAAGC CACCGTGATCGCCGTGATCAAGGATGCGCTCGGCGATCGCGTCAGCGACGTGAAGGCGTCGCAGCGGCTGACCGCGAGCG CGTCCTGCCTGGTCGCCGGCGGCTTCGGGCCCGATCGCGAGCTGGAGAAGATGCTGGCGCGCGCCAACAAGGGCGCCGCC ACCAAGCCGGTGCTCGAGATCAATCTCGGCCACCCGCTGGTCGCAGCGTTGGCGGATACCAAAGCCGACAAGGCCGACGC CACCGACCTGTCGTTCCTGCTGCTGGAACAGGCGCAGATCCTCGACGGCGAATTGCCCGAAGACCCCGCCGCCTTCGCCG GCCGCCTCAACCGGCTGGTGCTGCGCGGCGTTGTTGCGCATGGTTAG
Upstream 100 bases:
>100_bases GGCGCGCTGATTTGGAGGCAATCACCGTCTTGCCATCGTGCGCCCGCGCGCTATATCCGAGCTTTCCCCCTTCACCCTTG TTCAGGATCGAGCGTTCCTC
Downstream 100 bases:
>100_bases CGCCTGACTAACAAACAGGGTTACCGGATTTTTAATCCCTGGGTTGCACACTGGCCGGCATCTGACGCCGACCAGTTGTG TGAACCCCATGCGTCTTTTC
Product: heat shock protein 90
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G
Number of amino acids: Translated: 628; Mature: 627
Protein sequence:
>628_residues MTTIDTASETKPFQAEVAELLNLMVHSVYSETDIFLRELISNASDALDKLRYESIANPALMADGGEPKIRIVPKKAPDTL TVIDNGIGMDRQELIDNLGTIAKSGTKSFLTKLTEAKDGAGLIGQFGVGFYAAFMVADSITVTSRRAGSAEAWTWSSSGG AGFEIAPASEEAAARIERGTEIVLHLKPDAAKYLEAYQIERIVSEYSDNIQFPIELVPEDGEPRQINSASALWQRSKSEL TEEDYKQAYKQVAGAFDEPAMTLHYRAEGRQSYAVLLFAPSTKPFDLFEPERKGRVKLYVRRVFITADADLLPPYLRFLR GVIDSEDLPLNLSREMLQNNPQLAQIRKAVTGKVIGELDSLADKQPEQFAKIWDAFGPVIKEGLYEDYERREKLLSLARF TTTAGEKRSLAQYVEAMKENQTEIYYLVGDSLDRLKANPKLESAAARGIEVLLLTDAVDAFWTSGGLDFGGKPLKSLSQG EVNFDLIPKLDADKAEDKPDEAKADEATVIAVIKDALGDRVSDVKASQRLTASASCLVAGGFGPDRELEKMLARANKGAA TKPVLEINLGHPLVAALADTKADKADATDLSFLLLEQAQILDGELPEDPAAFAGRLNRLVLRGVVAHG
Sequences:
>Translated_628_residues MTTIDTASETKPFQAEVAELLNLMVHSVYSETDIFLRELISNASDALDKLRYESIANPALMADGGEPKIRIVPKKAPDTL TVIDNGIGMDRQELIDNLGTIAKSGTKSFLTKLTEAKDGAGLIGQFGVGFYAAFMVADSITVTSRRAGSAEAWTWSSSGG AGFEIAPASEEAAARIERGTEIVLHLKPDAAKYLEAYQIERIVSEYSDNIQFPIELVPEDGEPRQINSASALWQRSKSEL TEEDYKQAYKQVAGAFDEPAMTLHYRAEGRQSYAVLLFAPSTKPFDLFEPERKGRVKLYVRRVFITADADLLPPYLRFLR GVIDSEDLPLNLSREMLQNNPQLAQIRKAVTGKVIGELDSLADKQPEQFAKIWDAFGPVIKEGLYEDYERREKLLSLARF TTTAGEKRSLAQYVEAMKENQTEIYYLVGDSLDRLKANPKLESAAARGIEVLLLTDAVDAFWTSGGLDFGGKPLKSLSQG EVNFDLIPKLDADKAEDKPDEAKADEATVIAVIKDALGDRVSDVKASQRLTASASCLVAGGFGPDRELEKMLARANKGAA TKPVLEINLGHPLVAALADTKADKADATDLSFLLLEQAQILDGELPEDPAAFAGRLNRLVLRGVVAHG >Mature_627_residues TTIDTASETKPFQAEVAELLNLMVHSVYSETDIFLRELISNASDALDKLRYESIANPALMADGGEPKIRIVPKKAPDTLT VIDNGIGMDRQELIDNLGTIAKSGTKSFLTKLTEAKDGAGLIGQFGVGFYAAFMVADSITVTSRRAGSAEAWTWSSSGGA GFEIAPASEEAAARIERGTEIVLHLKPDAAKYLEAYQIERIVSEYSDNIQFPIELVPEDGEPRQINSASALWQRSKSELT EEDYKQAYKQVAGAFDEPAMTLHYRAEGRQSYAVLLFAPSTKPFDLFEPERKGRVKLYVRRVFITADADLLPPYLRFLRG VIDSEDLPLNLSREMLQNNPQLAQIRKAVTGKVIGELDSLADKQPEQFAKIWDAFGPVIKEGLYEDYERREKLLSLARFT TTAGEKRSLAQYVEAMKENQTEIYYLVGDSLDRLKANPKLESAAARGIEVLLLTDAVDAFWTSGGLDFGGKPLKSLSQGE VNFDLIPKLDADKAEDKPDEAKADEATVIAVIKDALGDRVSDVKASQRLTASASCLVAGGFGPDRELEKMLARANKGAAT KPVLEINLGHPLVAALADTKADKADATDLSFLLLEQAQILDGELPEDPAAFAGRLNRLVLRGVVAHG
Specific function: Molecular chaperone. Has ATPase activity
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family
Homologues:
Organism=Homo sapiens, GI155722983, Length=649, Percent_Identity=33.7442218798151, Blast_Score=341, Evalue=1e-93, Organism=Homo sapiens, GI4507677, Length=416, Percent_Identity=34.8557692307692, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI154146191, Length=414, Percent_Identity=34.5410628019324, Blast_Score=231, Evalue=2e-60, Organism=Homo sapiens, GI153792590, Length=414, Percent_Identity=34.5410628019324, Blast_Score=229, Evalue=7e-60, Organism=Homo sapiens, GI20149594, Length=414, Percent_Identity=34.7826086956522, Blast_Score=224, Evalue=2e-58, Organism=Escherichia coli, GI1786679, Length=630, Percent_Identity=42.8571428571429, Blast_Score=477, Evalue=1e-135, Organism=Caenorhabditis elegans, GI17559162, Length=673, Percent_Identity=37.295690936107, Blast_Score=428, Evalue=1e-120, Organism=Caenorhabditis elegans, GI17542208, Length=670, Percent_Identity=36.1194029850746, Blast_Score=364, Evalue=1e-101, Organism=Caenorhabditis elegans, GI115535205, Length=634, Percent_Identity=35.6466876971609, Blast_Score=335, Evalue=6e-92, Organism=Caenorhabditis elegans, GI115535167, Length=422, Percent_Identity=39.0995260663507, Blast_Score=273, Evalue=3e-73, Organism=Saccharomyces cerevisiae, GI6323840, Length=682, Percent_Identity=37.3900293255132, Blast_Score=410, Evalue=1e-115, Organism=Saccharomyces cerevisiae, GI6325016, Length=418, Percent_Identity=36.8421052631579, Blast_Score=246, Evalue=6e-66, Organism=Drosophila melanogaster, GI21357739, Length=676, Percent_Identity=33.8757396449704, Blast_Score=351, Evalue=1e-96, Organism=Drosophila melanogaster, GI24586016, Length=634, Percent_Identity=34.2271293375394, Blast_Score=318, Evalue=8e-87, Organism=Drosophila melanogaster, GI17647529, Length=417, Percent_Identity=35.0119904076739, Blast_Score=246, Evalue=3e-65,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): HTPG_RHOP2 (Q2IQY5)
Other databases:
- EMBL: CP000250 - RefSeq: YP_488286.1 - HSSP: P07900 - ProteinModelPortal: Q2IQY5 - STRING: Q2IQY5 - GeneID: 3912510 - GenomeReviews: CP000250_GR - KEGG: rpb:RPB_4692 - eggNOG: COG0326 - HOGENOM: HBG631012 - OMA: AIYYITA - ProtClustDB: PRK05218 - BioCyc: RPAL316058:RPB_4692-MONOMER - GO: GO:0005737 - HAMAP: MF_00505 - InterPro: IPR003594 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 - Gene3D: G3DSA:3.30.565.10 - PANTHER: PTHR11528 - PIRSF: PIRSF002583 - PRINTS: PR00775 - SMART: SM00387
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 68606; Mature: 68475
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS00298 HSP90
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIDTASETKPFQAEVAELLNLMVHSVYSETDIFLRELISNASDALDKLRYESIANPAL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE MADGGEPKIRIVPKKAPDTLTVIDNGIGMDRQELIDNLGTIAKSGTKSFLTKLTEAKDGA EECCCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC GLIGQFGVGFYAAFMVADSITVTSRRAGSAEAWTWSSSGGAGFEIAPASEEAAARIERGT CCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCEEECCCCCCCEEECCCCHHHHHHHHCCC EIVLHLKPDAAKYLEAYQIERIVSEYSDNIQFPIELVPEDGEPRQINSASALWQRSKSEL EEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHC TEEDYKQAYKQVAGAFDEPAMTLHYRAEGRQSYAVLLFAPSTKPFDLFEPERKGRVKLYV CHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEE RRVFITADADLLPPYLRFLRGVIDSEDLPLNLSREMLQNNPQLAQIRKAVTGKVIGELDS EEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH LADKQPEQFAKIWDAFGPVIKEGLYEDYERREKLLSLARFTTTAGEKRSLAQYVEAMKEN HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC QTEIYYLVGDSLDRLKANPKLESAAARGIEVLLLTDAVDAFWTSGGLDFGGKPLKSLSQG CCEEEEEECCCHHHHCCCCCHHHHHHCCEEEEEEEHHHHHHHCCCCCCCCCCCHHHHCCC EVNFDLIPKLDADKAEDKPDEAKADEATVIAVIKDALGDRVSDVKASQRLTASASCLVAG CCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEC GFGPDRELEKMLARANKGAATKPVLEINLGHPLVAALADTKADKADATDLSFLLLEQAQI CCCCCHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LDGELPEDPAAFAGRLNRLVLRGVVAHG HCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTIDTASETKPFQAEVAELLNLMVHSVYSETDIFLRELISNASDALDKLRYESIANPAL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE MADGGEPKIRIVPKKAPDTLTVIDNGIGMDRQELIDNLGTIAKSGTKSFLTKLTEAKDGA EECCCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC GLIGQFGVGFYAAFMVADSITVTSRRAGSAEAWTWSSSGGAGFEIAPASEEAAARIERGT CCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCEEECCCCCCCEEECCCCHHHHHHHHCCC EIVLHLKPDAAKYLEAYQIERIVSEYSDNIQFPIELVPEDGEPRQINSASALWQRSKSEL EEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHC TEEDYKQAYKQVAGAFDEPAMTLHYRAEGRQSYAVLLFAPSTKPFDLFEPERKGRVKLYV CHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEE RRVFITADADLLPPYLRFLRGVIDSEDLPLNLSREMLQNNPQLAQIRKAVTGKVIGELDS EEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH LADKQPEQFAKIWDAFGPVIKEGLYEDYERREKLLSLARFTTTAGEKRSLAQYVEAMKEN HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC QTEIYYLVGDSLDRLKANPKLESAAARGIEVLLLTDAVDAFWTSGGLDFGGKPLKSLSQG CCEEEEEECCCHHHHCCCCCHHHHHHCCEEEEEEEHHHHHHHCCCCCCCCCCCHHHHCCC EVNFDLIPKLDADKAEDKPDEAKADEATVIAVIKDALGDRVSDVKASQRLTASASCLVAG CCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEC GFGPDRELEKMLARANKGAATKPVLEINLGHPLVAALADTKADKADATDLSFLLLEQAQI CCCCCHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LDGELPEDPAAFAGRLNRLVLRGVVAHG HCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA