Click here to switch to the map view.

The map label for this gene is omp31 [H]

Identifier: 86751789

GI number: 86751789

Start: 5307665

End: 5309353

Strand: Reverse

Name: omp31 [H]

Synonym: RPB_4691

Alternate gene names: 86751789

Gene position: 5309353-5307665 (Counterclockwise)

Preceding gene: 86751790

Following gene: 86751788

Centisome position: 99.58

GC content: 66.25

Gene sequence:

>1689_bases
ATGCGTCTTTTCGCTTCGACCACGGCCATGCTGATACTGGCCGCCACAACCGCAGCCGCCGCCGATCTGCCGCGGTTGCC
TTTGTCCCCGGCCGCGCCAGTGCAGTGGAGCTGGACCGGCCTGTATTGGGGCGCGCATCTCGGCGGCAGCTTCGGGCAGA
CCAGCTTCAGCGATCCCGCCGGTCCCGGCCTCTATGGCGGCCAGGTCCGCAGCCCGGCGGCGCTTGCCGGCATTCAGCTC
GGCTACAATTATCAACCCAACAGGAACTGGCTGATCGGTGTCGAGGCCGATGTCAGCGCGATGAACGGCAACGGCACGCA
GAGCTGCCTGGTCTCCTCCGGCCTGTTCATCTCGGCGAACTGCCGCGTCCGCCAGGACGCACTGGCCACGCTCACGGGCC
GCGCCGGCTTCGTGACCGGCCCCGGCGGCCGAACGTTGCTCTACGCCAAAGCCGGCGCCGCCTTTCTCAGTGAACGGCTC
GACATCACCATCGGCAATCCGATCGGATCGTCGACCGAGAGCACTGACGGCCGCTGGGGCTGGACCGCGGGCGCCGGCAT
CGAGCGGGCGCTGGCGCCGGCCTGGTCCGTCAAGTTCGAATACGACTACGCGAATTTCGGCAGCCGCGACATGGCGACGC
CGTCGAGCTACCGGCTGGTGCCGGGCGTCGACTATTTCGCCACGCCGCAGGGCGTCAGCAAGGTCAGCCAGGACCTGCAC
GCCGTGAAGGTCGGCCTCAATCTCAAATTCGGCGGCGACGTCGACGCCCGCTTCGACGACTATCATCTGCGCGGCACGCA
GGCGGCGGACGATCGTGTCGAGCGCGGCGCGGTCGAGGTCGGCGGCCGGGTCTGGTACTCTTCGGGCCGGTTCCAGAAAG
ACCTCGGCGCGACCGTCAATCAGGGCCAGCAGAACATCCTGATCTCGCGGCTGACCTATCAGAGCACGGCGGCGTCGGGC
GAAATGTTCGGCCGCGTCGACGGACCCTACGACACCTTCCTCAAGGGCTTCGCCGGCGGCGGTACGCTCGTGAGCGGCAA
CATGCATGACGAGGACTGGATCGCCAATGACGGCATCCCGTATTCGAACACGCTGCACGACCCGGTGAAGGGCAGCATCG
CCTATGCGACGCTCGACGTCGGCTACAATCTGCTGCGCGGGTCGGACTACAAATTCGGCGGCTTCGTCGGCTACAACTAC
TATCGCGAGAACAAATCGGCCTATGGCTGCGTGCAGACCGCCGGCGCGACCGCGTCCCAGATCTGCGGCTCGCCGATCTC
GAATGCCGTTCTCGCCATGACCGAAAACGACACCTGGCATTCGCTGCGGGTCGGCTTCAACGGCGAGCTCGGACTCGGCC
GCGGATCGAAACTCTCCGCCGACGCGGCCTATCTGCCCTATGTGAAGATGTTCGGAACCGACAATCACGTGATGCGCACC
GACGTCACCGACACCGTCTCGCCGGAACAGGGAACCGGGCAGGGCGTGCAGCTCGAGGCGATCCTGTCGTATCAGGTCAC
GAACGCCTTCAGCGTCGGCGCCGGCGCGCGCTACTGGGCGATGTGGGCGACCACCAACGCCTACACCAACATCTTCGGCT
CGGAGTGTCCCTGCCAGACCCTGCCGACGCGTACCGAACGCTACGGAACCTTCCTGCAGGCGGCCTACAAGTTCGATGCG
CCGCGATAG

Upstream 100 bases:

>100_bases
GCGCATGGTTAGCGCCTGACTAACAAACAGGGTTACCGGATTTTTAATCCCTGGGTTGCACACTGGCCGGCATCTGACGC
CGACCAGTTGTGTGAACCCC

Downstream 100 bases:

>100_bases
CGACGATGCGGGGCGGCACGTAGTCCTGTCACAAAATCCCAAGAAAAATACACTGGGCAGTCGTCGGCTTCTTGAATAGT
GTGCCGCCAACCAAGAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 562; Mature: 562

Protein sequence:

>562_residues
MRLFASTTAMLILAATTAAAADLPRLPLSPAAPVQWSWTGLYWGAHLGGSFGQTSFSDPAGPGLYGGQVRSPAALAGIQL
GYNYQPNRNWLIGVEADVSAMNGNGTQSCLVSSGLFISANCRVRQDALATLTGRAGFVTGPGGRTLLYAKAGAAFLSERL
DITIGNPIGSSTESTDGRWGWTAGAGIERALAPAWSVKFEYDYANFGSRDMATPSSYRLVPGVDYFATPQGVSKVSQDLH
AVKVGLNLKFGGDVDARFDDYHLRGTQAADDRVERGAVEVGGRVWYSSGRFQKDLGATVNQGQQNILISRLTYQSTAASG
EMFGRVDGPYDTFLKGFAGGGTLVSGNMHDEDWIANDGIPYSNTLHDPVKGSIAYATLDVGYNLLRGSDYKFGGFVGYNY
YRENKSAYGCVQTAGATASQICGSPISNAVLAMTENDTWHSLRVGFNGELGLGRGSKLSADAAYLPYVKMFGTDNHVMRT
DVTDTVSPEQGTGQGVQLEAILSYQVTNAFSVGAGARYWAMWATTNAYTNIFGSECPCQTLPTRTERYGTFLQAAYKFDA
PR

Sequences:

>Translated_562_residues
MRLFASTTAMLILAATTAAAADLPRLPLSPAAPVQWSWTGLYWGAHLGGSFGQTSFSDPAGPGLYGGQVRSPAALAGIQL
GYNYQPNRNWLIGVEADVSAMNGNGTQSCLVSSGLFISANCRVRQDALATLTGRAGFVTGPGGRTLLYAKAGAAFLSERL
DITIGNPIGSSTESTDGRWGWTAGAGIERALAPAWSVKFEYDYANFGSRDMATPSSYRLVPGVDYFATPQGVSKVSQDLH
AVKVGLNLKFGGDVDARFDDYHLRGTQAADDRVERGAVEVGGRVWYSSGRFQKDLGATVNQGQQNILISRLTYQSTAASG
EMFGRVDGPYDTFLKGFAGGGTLVSGNMHDEDWIANDGIPYSNTLHDPVKGSIAYATLDVGYNLLRGSDYKFGGFVGYNY
YRENKSAYGCVQTAGATASQICGSPISNAVLAMTENDTWHSLRVGFNGELGLGRGSKLSADAAYLPYVKMFGTDNHVMRT
DVTDTVSPEQGTGQGVQLEAILSYQVTNAFSVGAGARYWAMWATTNAYTNIFGSECPCQTLPTRTERYGTFLQAAYKFDA
PR
>Mature_562_residues
MRLFASTTAMLILAATTAAAADLPRLPLSPAAPVQWSWTGLYWGAHLGGSFGQTSFSDPAGPGLYGGQVRSPAALAGIQL
GYNYQPNRNWLIGVEADVSAMNGNGTQSCLVSSGLFISANCRVRQDALATLTGRAGFVTGPGGRTLLYAKAGAAFLSERL
DITIGNPIGSSTESTDGRWGWTAGAGIERALAPAWSVKFEYDYANFGSRDMATPSSYRLVPGVDYFATPQGVSKVSQDLH
AVKVGLNLKFGGDVDARFDDYHLRGTQAADDRVERGAVEVGGRVWYSSGRFQKDLGATVNQGQQNILISRLTYQSTAASG
EMFGRVDGPYDTFLKGFAGGGTLVSGNMHDEDWIANDGIPYSNTLHDPVKGSIAYATLDVGYNLLRGSDYKFGGFVGYNY
YRENKSAYGCVQTAGATASQICGSPISNAVLAMTENDTWHSLRVGFNGELGLGRGSKLSADAAYLPYVKMFGTDNHVMRT
DVTDTVSPEQGTGQGVQLEAILSYQVTNAFSVGAGARYWAMWATTNAYTNIFGSECPCQTLPTRTERYGTFLQAAYKFDA
PR

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 59991; Mature: 59991

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFASTTAMLILAATTAAAADLPRLPLSPAAPVQWSWTGLYWGAHLGGSFGQTSFSDPA
CEEEHHHHEEEEEEEHHHHHHCCCCCCCCCCCCCEEEEEEEEEEHHCCCCCCCCCCCCCC
GPGLYGGQVRSPAALAGIQLGYNYQPNRNWLIGVEADVSAMNGNGTQSCLVSSGLFISAN
CCCCCCCCCCCCHHHEEEEECCCCCCCCCEEEEEECCEEEECCCCCHHHEEECCCEEEEC
CRVRQDALATLTGRAGFVTGPGGRTLLYAKAGAAFLSERLDITIGNPIGSSTESTDGRWG
CEECCCHHHEECCCCCEEECCCCCEEEEEECCHHHHHCCCEEEECCCCCCCCCCCCCCEE
WTAGAGIERALAPAWSVKFEYDYANFGSRDMATPSSYRLVPGVDYFATPQGVSKVSQDLH
EECCCCHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHCCE
AVKVGLNLKFGGDVDARFDDYHLRGTQAADDRVERGAVEVGGRVWYSSGRFQKDLGATVN
EEEEEEEEEECCCCCCCCCCEEECCCCCHHHHHHCCCEEECCEEEECCCCCHHHHCCHHC
QGQQNILISRLTYQSTAASGEMFGRVDGPYDTFLKGFAGGGTLVSGNMHDEDWIANDGIP
CCCCEEEEEEEEECCCCCCCCEEECCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCC
YSNTLHDPVKGSIAYATLDVGYNLLRGSDYKFGGFVGYNYYRENKSAYGCVQTAGATASQ
CCCCCCCCCCCCEEEEEEECCCHHHCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCHHH
ICGSPISNAVLAMTENDTWHSLRVGFNGELGLGRGSKLSADAAYLPYVKMFGTDNHVMRT
HCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCEECCEEEEECCCCCEEEE
DVTDTVSPEQGTGQGVQLEAILSYQVTNAFSVGAGARYWAMWATTNAYTNIFGSECPCQT
CCCCCCCCCCCCCCCEEEEEEEEEEECCEEECCCCCEEEEEEEECCHHHHCCCCCCCCCC
LPTRTERYGTFLQAAYKFDAPR
CCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRLFASTTAMLILAATTAAAADLPRLPLSPAAPVQWSWTGLYWGAHLGGSFGQTSFSDPA
CEEEHHHHEEEEEEEHHHHHHCCCCCCCCCCCCCEEEEEEEEEEHHCCCCCCCCCCCCCC
GPGLYGGQVRSPAALAGIQLGYNYQPNRNWLIGVEADVSAMNGNGTQSCLVSSGLFISAN
CCCCCCCCCCCCHHHEEEEECCCCCCCCCEEEEEECCEEEECCCCCHHHEEECCCEEEEC
CRVRQDALATLTGRAGFVTGPGGRTLLYAKAGAAFLSERLDITIGNPIGSSTESTDGRWG
CEECCCHHHEECCCCCEEECCCCCEEEEEECCHHHHHCCCEEEECCCCCCCCCCCCCCEE
WTAGAGIERALAPAWSVKFEYDYANFGSRDMATPSSYRLVPGVDYFATPQGVSKVSQDLH
EECCCCHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHCCE
AVKVGLNLKFGGDVDARFDDYHLRGTQAADDRVERGAVEVGGRVWYSSGRFQKDLGATVN
EEEEEEEEEECCCCCCCCCCEEECCCCCHHHHHHCCCEEECCEEEECCCCCHHHHCCHHC
QGQQNILISRLTYQSTAASGEMFGRVDGPYDTFLKGFAGGGTLVSGNMHDEDWIANDGIP
CCCCEEEEEEEEECCCCCCCCEEECCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCC
YSNTLHDPVKGSIAYATLDVGYNLLRGSDYKFGGFVGYNYYRENKSAYGCVQTAGATASQ
CCCCCCCCCCCCEEEEEEECCCHHHCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCHHH
ICGSPISNAVLAMTENDTWHSLRVGFNGELGLGRGSKLSADAAYLPYVKMFGTDNHVMRT
HCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCEECCEEEEECCCCCEEEE
DVTDTVSPEQGTGQGVQLEAILSYQVTNAFSVGAGARYWAMWATTNAYTNIFGSECPCQT
CCCCCCCCCCCCCCCEEEEEEEEEEECCEEECCCCCEEEEEEEECCHHHHCCCCCCCCCC
LPTRTERYGTFLQAAYKFDAPR
CCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]