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The map label for this gene is 86751712

Identifier: 86751712

GI number: 86751712

Start: 5213725

End: 5214945

Strand: Reverse

Name: 86751712

Synonym: RPB_4614

Alternate gene names: NA

Gene position: 5214945-5213725 (Counterclockwise)

Preceding gene: 86751720

Following gene: 86751711

Centisome position: 97.81

GC content: 61.67

Gene sequence:

>1221_bases
ATGAATTTACGCCCGAATTCCGTTTTCGCGTCGGCAGCCGCGGTGGCCGCGGTTATGCTTGCGGCCACATCGGCTGCAGC
GGCGGAGAAGAAATACGATCCCGGCGCCAGCGACACTGAAATCAAGATCGGCCAGACCGTGCCGCATTCGGGTCCCGGTT
CGCTCTATGGCGTGCTCGGCCGCGTCGGCGAAGCCTATTTCCAGATGCTGAACGACAAGGGCGGCATCAACGGCCGCAAG
GTCAAATTCCTGACCCTGGACGATTCCTACAGCGCGCCGAAGGCGGTCGAAGCCACCCGGCGGCTGGTCGAGCAGGAAGA
GGTGCTGGCGCTGTACGGCTCGCTCGGCACCGCGCCGCAGACGGCTGTCCACAAATATCTCAACAACAAGAAGGTGCCGC
AGCTGCTGCTGAACACCGGCGCGTCGAAATGGAACGACCCGAAGAACTTCAAATGGACCATGGCGGGTCTGCCGCTCTAT
CCGACCGAGGCGCGGATTCTCGCCAAATACGTGCTCAGCGTGAAACCGGACGCCAAGATCGCGATCCTCTATCAGAACGA
CGATTTCGGCCGTGACTTCCTCGGCCCGTTCAAGAAGGTTTTGGAAGACGCCGGCGGCAAGGCCAAGGTGATCGCCGAGG
CCAGCTACGATCTGACCGAGCCGACCATCGACTCGCAGATGATCAATCTGTCGAAATCCGGCGCCGACGTGTTCTACAAC
ATCACCACCGGCAAGGCGTCGTCGCAGTCGATCCGCAAGGTCGTGGAACTCGGCTGGAAGCCGCTGCAACTGCTGTCGGC
CGGCTCGACCGGGCGCTCGATTCTCGAGGCCGCAGGCCTCGACAACGCCAAGGGGATCGTGGCGATCGCCTATACCAAGG
ACATCGGATCGCCGAAATACGCCGGCGACCCCGACGTGATGGCGTTCGAGGAATTGCGCAAGAAGTACCTGCCGAACGTC
ACGCCGGACAATTCGATCGCGTTCTCCGGCTATGCGCAGGCCGCCGCCATGGCGGAAATTCTGCGCCGCTGCGGCGACGA
TCTGACGCGTGAAAACGTCATCAAGCAGGCGTCGATGCTGGGCGGATTCCGCGCTCCGCACATGCTGCCCGGCGTGAGCT
ACTCCTACAAGCCGGACGACTACACTTCGATCAAGACGCTCTACACGATGGAATTCAGCGGCAAGGACTGGATCGTGTCC
GACAAGCCGGTCGCTGAATAA

Upstream 100 bases:

>100_bases
AGTGTTCCGCACAGGATGACTTGCCGCAAAGAGCGATTCAAGCCGCGGCAAACGAGAACCGGACGCGCCAGCGAACCGGC
ACAACAGGGGAGGAAACTCA

Downstream 100 bases:

>100_bases
CGGATCTCACCGCGTCCAGCGCTGACGGGACGCCCGCCTTCGGCGGGCGTTTTGCGTTTCCGGATCGCATGGCCGGCGGA
GCCGCGCGACGATCTCGATT

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MNLRPNSVFASAAAVAAVMLAATSAAAAEKKYDPGASDTEIKIGQTVPHSGPGSLYGVLGRVGEAYFQMLNDKGGINGRK
VKFLTLDDSYSAPKAVEATRRLVEQEEVLALYGSLGTAPQTAVHKYLNNKKVPQLLLNTGASKWNDPKNFKWTMAGLPLY
PTEARILAKYVLSVKPDAKIAILYQNDDFGRDFLGPFKKVLEDAGGKAKVIAEASYDLTEPTIDSQMINLSKSGADVFYN
ITTGKASSQSIRKVVELGWKPLQLLSAGSTGRSILEAAGLDNAKGIVAIAYTKDIGSPKYAGDPDVMAFEELRKKYLPNV
TPDNSIAFSGYAQAAAMAEILRRCGDDLTRENVIKQASMLGGFRAPHMLPGVSYSYKPDDYTSIKTLYTMEFSGKDWIVS
DKPVAE

Sequences:

>Translated_406_residues
MNLRPNSVFASAAAVAAVMLAATSAAAAEKKYDPGASDTEIKIGQTVPHSGPGSLYGVLGRVGEAYFQMLNDKGGINGRK
VKFLTLDDSYSAPKAVEATRRLVEQEEVLALYGSLGTAPQTAVHKYLNNKKVPQLLLNTGASKWNDPKNFKWTMAGLPLY
PTEARILAKYVLSVKPDAKIAILYQNDDFGRDFLGPFKKVLEDAGGKAKVIAEASYDLTEPTIDSQMINLSKSGADVFYN
ITTGKASSQSIRKVVELGWKPLQLLSAGSTGRSILEAAGLDNAKGIVAIAYTKDIGSPKYAGDPDVMAFEELRKKYLPNV
TPDNSIAFSGYAQAAAMAEILRRCGDDLTRENVIKQASMLGGFRAPHMLPGVSYSYKPDDYTSIKTLYTMEFSGKDWIVS
DKPVAE
>Mature_406_residues
MNLRPNSVFASAAAVAAVMLAATSAAAAEKKYDPGASDTEIKIGQTVPHSGPGSLYGVLGRVGEAYFQMLNDKGGINGRK
VKFLTLDDSYSAPKAVEATRRLVEQEEVLALYGSLGTAPQTAVHKYLNNKKVPQLLLNTGASKWNDPKNFKWTMAGLPLY
PTEARILAKYVLSVKPDAKIAILYQNDDFGRDFLGPFKKVLEDAGGKAKVIAEASYDLTEPTIDSQMINLSKSGADVFYN
ITTGKASSQSIRKVVELGWKPLQLLSAGSTGRSILEAAGLDNAKGIVAIAYTKDIGSPKYAGDPDVMAFEELRKKYLPNV
TPDNSIAFSGYAQAAAMAEILRRCGDDLTRENVIKQASMLGGFRAPHMLPGVSYSYKPDDYTSIKTLYTMEFSGKDWIVS
DKPVAE

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 43831; Mature: 43831

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRPNSVFASAAAVAAVMLAATSAAAAEKKYDPGASDTEIKIGQTVPHSGPGSLYGVLG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHH
RVGEAYFQMLNDKGGINGRKVKFLTLDDSYSAPKAVEATRRLVEQEEVLALYGSLGTAPQ
HHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
TAVHKYLNNKKVPQLLLNTGASKWNDPKNFKWTMAGLPLYPTEARILAKYVLSVKPDAKI
HHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEE
AILYQNDDFGRDFLGPFKKVLEDAGGKAKVIAEASYDLTEPTIDSQMINLSKSGADVFYN
EEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEE
ITTGKASSQSIRKVVELGWKPLQLLSAGSTGRSILEAAGLDNAKGIVAIAYTKDIGSPKY
EECCCCCHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCC
AGDPDVMAFEELRKKYLPNVTPDNSIAFSGYAQAAAMAEILRRCGDDLTRENVIKQASML
CCCCCHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GGFRAPHMLPGVSYSYKPDDYTSIKTLYTMEFSGKDWIVSDKPVAE
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEECCCCCCC
>Mature Secondary Structure
MNLRPNSVFASAAAVAAVMLAATSAAAAEKKYDPGASDTEIKIGQTVPHSGPGSLYGVLG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHH
RVGEAYFQMLNDKGGINGRKVKFLTLDDSYSAPKAVEATRRLVEQEEVLALYGSLGTAPQ
HHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
TAVHKYLNNKKVPQLLLNTGASKWNDPKNFKWTMAGLPLYPTEARILAKYVLSVKPDAKI
HHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEE
AILYQNDDFGRDFLGPFKKVLEDAGGKAKVIAEASYDLTEPTIDSQMINLSKSGADVFYN
EEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEE
ITTGKASSQSIRKVVELGWKPLQLLSAGSTGRSILEAAGLDNAKGIVAIAYTKDIGSPKY
EECCCCCHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCC
AGDPDVMAFEELRKKYLPNVTPDNSIAFSGYAQAAAMAEILRRCGDDLTRENVIKQASML
CCCCCHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GGFRAPHMLPGVSYSYKPDDYTSIKTLYTMEFSGKDWIVSDKPVAE
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA