| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750922
Identifier: 86750922
GI number: 86750922
Start: 4350968
End: 4351900
Strand: Reverse
Name: 86750922
Synonym: RPB_3813
Alternate gene names: NA
Gene position: 4351900-4350968 (Counterclockwise)
Preceding gene: 86750923
Following gene: 86750921
Centisome position: 81.62
GC content: 68.6
Gene sequence:
>933_bases ATGAGCCAGACCGCCCCGGTATCAGGTAGCAACGATTTGTCGCAGGCCGTCGTCGCGCCTCGCGCGCCGGCCGCCGAAGA CGTTCTCGCCGCGATCATCGCTGCGTTGCCGGAGCTCGCGCATCACCATGCGCCGGGCGGGGCGGCGTATCAGGCGCTCG CCGCCGCGGCCCGCCAGGCGGTGGTGACGCTGTTCGCGCAGGGCGGCAAGGACGTGGCGTTCGGCCCGTTCGGGCCGATC AGCTTCCCGTATCATGCGATGGGGGCGGTCGATTCGCTCGACCTGTTCGGCCTCGACGAGCTGATCCTGTTCGCGTTTTA TTGGCAGAACCGCGGCGTCTACCGGAAGACCGCCGACATCGGCGGCAATATCGGCCTGCACAGCCTGGTGATGGCGCGCT GCGACTTCGAGGTGCAGAGCTACGAGCCAGATCCCGAGCACATCGCGCTGTTCAAGGCCAACATGGCCGCCAACGGCGTC AGCACGGTGACGGTGCACGAGGCGGCGGTGTCGGCCGAGGCCGGCCAGGCGGAATTCCTGCGGCTGCGCGGCAATACCAC CGGCAGCCATCTCGCCGGCGCCAAGAGCGATCCCTACGGCCAGATCGACCGCTTCGCCGTCCGGCTCGAGGCGTTTGCCG CGATCGCCGCACAGGTCGATTTCGCCAAGATCGACGCCGAGGGGCACGAGGCGGTGATCATCACCTCGCTGCCGGCCGAG CGCTGGGACGGCCTCGACGTGATGCTGGAGATCGGCAGCGACGCCAATGCCGCGGCGATCTTCGACTACGCCGCGAACGC GGGCGTGCATCTGTTCACGCAGAAGACCGGCTGGCGCAAGGCGGCCAAGATTGCCGACCTGCCGACCTCGTACAAGCAGG GCAGCGCCTTTCTCACCCGCAAGCACGCGATGCCGGGCCTGCCGCCGACCTAG
Upstream 100 bases:
>100_bases GGCGTCGACCGATCCGATCCGGCCGCGGGGGCATCGCTTGCCCTGTGCGTCGAAATGTGGTCGGAGTGAGTGATCGGCAA ATCAGCGACGGCATCTCACC
Downstream 100 bases:
>100_bases GCGCGGACGAGCGCGACCGACCCCGATCCCACCTGCAAGAACACGCCGCCGGCCGCGCCGGCTTGCTCCCGTAGAGTCCC GAGGGGGCCTTCACGGACGA
Product: methyltransferase FkbM
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MSQTAPVSGSNDLSQAVVAPRAPAAEDVLAAIIAALPELAHHHAPGGAAYQALAAAARQAVVTLFAQGGKDVAFGPFGPI SFPYHAMGAVDSLDLFGLDELILFAFYWQNRGVYRKTADIGGNIGLHSLVMARCDFEVQSYEPDPEHIALFKANMAANGV STVTVHEAAVSAEAGQAEFLRLRGNTTGSHLAGAKSDPYGQIDRFAVRLEAFAAIAAQVDFAKIDAEGHEAVIITSLPAE RWDGLDVMLEIGSDANAAAIFDYAANAGVHLFTQKTGWRKAAKIADLPTSYKQGSAFLTRKHAMPGLPPT
Sequences:
>Translated_310_residues MSQTAPVSGSNDLSQAVVAPRAPAAEDVLAAIIAALPELAHHHAPGGAAYQALAAAARQAVVTLFAQGGKDVAFGPFGPI SFPYHAMGAVDSLDLFGLDELILFAFYWQNRGVYRKTADIGGNIGLHSLVMARCDFEVQSYEPDPEHIALFKANMAANGV STVTVHEAAVSAEAGQAEFLRLRGNTTGSHLAGAKSDPYGQIDRFAVRLEAFAAIAAQVDFAKIDAEGHEAVIITSLPAE RWDGLDVMLEIGSDANAAAIFDYAANAGVHLFTQKTGWRKAAKIADLPTSYKQGSAFLTRKHAMPGLPPT >Mature_309_residues SQTAPVSGSNDLSQAVVAPRAPAAEDVLAAIIAALPELAHHHAPGGAAYQALAAAARQAVVTLFAQGGKDVAFGPFGPIS FPYHAMGAVDSLDLFGLDELILFAFYWQNRGVYRKTADIGGNIGLHSLVMARCDFEVQSYEPDPEHIALFKANMAANGVS TVTVHEAAVSAEAGQAEFLRLRGNTTGSHLAGAKSDPYGQIDRFAVRLEAFAAIAAQVDFAKIDAEGHEAVIITSLPAER WDGLDVMLEIGSDANAAAIFDYAANAGVHLFTQKTGWRKAAKIADLPTSYKQGSAFLTRKHAMPGLPPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32640; Mature: 32509
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTAPVSGSNDLSQAVVAPRAPAAEDVLAAIIAALPELAHHHAPGGAAYQALAAAARQA CCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VVTLFAQGGKDVAFGPFGPISFPYHAMGAVDSLDLFGLDELILFAFYWQNRGVYRKTADI HHHHHHCCCCEEECCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCC GGNIGLHSLVMARCDFEVQSYEPDPEHIALFKANMAANGVSTVTVHEAAVSAEAGQAEFL CCCCCHHHHHHHHCCCEEECCCCCCCEEEEEEECCCCCCCEEEEEEHHHHCCCCCCEEEE RLRGNTTGSHLAGAKSDPYGQIDRFAVRLEAFAAIAAQVDFAKIDAEGHEAVIITSLPAE EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCC RWDGLDVMLEIGSDANAAAIFDYAANAGVHLFTQKTGWRKAAKIADLPTSYKQGSAFLTR CCCCEEEEEEECCCCCCEEEEEHHCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCEEEH KHAMPGLPPT HHCCCCCCCC >Mature Secondary Structure SQTAPVSGSNDLSQAVVAPRAPAAEDVLAAIIAALPELAHHHAPGGAAYQALAAAARQA CCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VVTLFAQGGKDVAFGPFGPISFPYHAMGAVDSLDLFGLDELILFAFYWQNRGVYRKTADI HHHHHHCCCCEEECCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCC GGNIGLHSLVMARCDFEVQSYEPDPEHIALFKANMAANGVSTVTVHEAAVSAEAGQAEFL CCCCCHHHHHHHHCCCEEECCCCCCCEEEEEEECCCCCCCEEEEEEHHHHCCCCCCEEEE RLRGNTTGSHLAGAKSDPYGQIDRFAVRLEAFAAIAAQVDFAKIDAEGHEAVIITSLPAE EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCC RWDGLDVMLEIGSDANAAAIFDYAANAGVHLFTQKTGWRKAAKIADLPTSYKQGSAFLTR CCCCEEEEEEECCCCCCEEEEEHHCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCEEEH KHAMPGLPPT HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA