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The map label for this gene is 86750923

Identifier: 86750923

GI number: 86750923

Start: 4352087

End: 4354753

Strand: Reverse

Name: 86750923

Synonym: RPB_3814

Alternate gene names: NA

Gene position: 4354753-4352087 (Counterclockwise)

Preceding gene: 86750924

Following gene: 86750922

Centisome position: 81.68

GC content: 66.14

Gene sequence:

>2667_bases
ATGTCAGGTATCGTTCTCTCGAATGCCGTCCGCCAGAACCTCTCGTCGCTTCAGGCCACGGCAGACTTGCTCGCCACCAC
CCAGAGCCGGCTCTCGTCCGGTAAGAAGGTGAACTCGGCGCTCGACAATCCGACCAACTTCTTCACCGCCGCCTCGCTCG
ACGCCCGCGCCAGCGACATCAACAACCTGCTCGACGGCATCAGCAGCGGCGTGCAGATCCTGCAGGCCGCCAACACCGGT
ATCACTTCGCTGACGAAGCTCGTCGACAGCGCCAAGTCGATCGCCAACCAGGCCCTGCAGACGACCTCGGGCTATGCCAC
GAAGTCGAACGTGTCCGCCACCATCTCCGGCGCCACCGCCGAGGATATCCGCGGCACCCAGAGCTTCGACAATGCGGTTG
CGACCGGCAACGTGATCTTCGACGGCACCACCGGCGGCACCACGGCTGCGGCCGGCACCGATACGCTCGGTGGCGCGATC
GTCAGCATCGCGGCTTCGGCGGCTGTGACCGTCCTCGGTGCGGTCGACGCGACGGCGACCGGCGCCGTGCTCTCGGTCGG
CACCGCCGCCGCGACCGCGGCCGGCACCAACCTGATCAGCGAACTGACCAACGGTTCGACCGTGACGGCGACCGGCCCTG
CCGCGGGTGACTCGATCACCGTCAACGGCAAGACCATCACCTTCACGACCGCCGGCGCGTCCAGCAAGGACTCCTCGGGC
AACTACACGATCGGTCTCGACCAGACCGTCAACTCGCTGCTCGACACCATCGACACCGTCAACGGCAACACCGGCCTGTC
CTCGGCCGTTACCGCCGGCCGGCTCGAACTGCACTCGGGCACCAACAGCCCGCTGACCGTTGGTGATAACGCCGGTGGCG
CCGTTCTGGCCAAGCTCGGCCTGACCGCGCAGACCGTCGATACCGCTGCCGCCACCGCGTCGGCGAACATCTCGGCGAGC
ACGCAGCTGTTCAACACCCATGGTGGCCTGACCACCACGGCGATCGCCGACGGCACGACCTTGTCGGTCAACGGCAAGAC
CATCACCTTCAAGACCGCCGACGCGCCGCAGGGCAACAACATCCCGACCGGCACCGGCGTCCTCGGCCGCATCGGCACCG
ACGGCAACGGCAACTCGACGATCTATCTCGGCGACCAGACCAAGTTCACCAACGCGACGGTGGGCGATCTGTTGACCGCG
ATCGATCTCGCGAACGGCGTCAAGGCGGCGTCGATCTCGTCGGGTGTCGCGACCATCAGCACCAACTCCGGCCAGACGGC
TTCCGCCGTCGCCGCCGGCATCACCACCATCCAGAGCTCGACCGGTGGCGATCTGAACGTCACGGCCTTCACCGACCTGT
TCAAGAACCTCGGCCTGACCACTTCGAGTGGTACTGGTCCGCTGACCCTGACCAAGCAGCGCACCACCAGCGGCACCACG
ATGGGCACGCTGATCGCCGACGGCTCGACCTTGAACGTGAACGGTAAGACCATCACCTTCAAGAACGCCGCGGTTCCGAC
CGCGTCGTCGAGCCACACCGGCATCTCCGGCAACGTCGAAACCGACGGCAGCGGCAATTCGACCGTGTACCTGCAGAAGG
GTACGCTCGATGACGTGCTGAAGGCGATCGACCTCGCCACCGGCGTCCGCGTCGCCACGCTCGGGATCTCCGGCGCGACG
ATTGCGACCGCCAATGGCTCCGCCAACTCGTCGATCACCAGCGGTTCGCTGAAGCTGTCGACCGGCCTCGCGTCGGATCT
GACCATCAACGGCACCGGCAATGCGCTGGCCGCCCTCGGCCTCACCGGCCCGAGCGGGACCTCGACCTCGTTCACCGCGA
CCCGCGGCGTTGCCGCCGGCAGCCTGAACGGCAAGAGCTTGACCTTCTCCTCCTTCAATGGCGGTTCGGCGGTCAATGTC
ACGCTCGGCGATGGCAGCAACGGTACCGTCAAGTCGCTGGCCCAGCTCAACGTCGCGCTGGCTGCCAACAACCTGACGGC
GTCGATCGACAACGCCTCCGGCAAGCTGACGATCGCAGCGTCGAACGACTACGCCTCCCGCACGCTGGGCGGCGCTGACG
GCGGCGTGCTCGGCGGCACTCTGGCCTCGCAGTTGACCTTCACCGTGCCGACCGCACCGGTGGCCGACGTCAACGCCCAG
AACACCCGCGCCGGCCTGGTCAAGCAGTTCAACGACGTGCTCGACCAGATCAAGACCACCGCGCAGGACTCTTCGTTCAA
CGGCGTCAACCTGCTGAACGGCGACAACCTGAAGTTGGTGTTCAACGAAACCGGCAAGTCCACGATCTCGATCCAGGGCG
TGACCTTCAACCCGACCGGCCTCGGCCTGTCGACCCTGGCCTCGGGCACGGACTTCATCGACAACAACGCCACCAACTCG
GTGTTGACCAAGCTGAGTGCCGCCTCGACCGCGCTGCGGTCGCAGTCGTCCGCTTTCGGTTCGAACCTGTCGATCGTGCA
GGCCCGTCAGGACTTCTCGAAGAGCCTGATCAACGTGCTGCAGACCGGCTCGTCCAACCTGACGCTGGCCGACACCAACG
AAGAAGCGGCGAACAGCCAGGCGCTGACGACCCGTCAGTCGATCGCGGTCTCGGCGCTGTCGCTGGCCAACCAGTCGCAG
CAGAGCGTGCTCCAGCTGCTGCGCTAA

Upstream 100 bases:

>100_bases
AAAGCCGCTGCCGCTCCTTTACGCATTTTTAGAGTCTGCCGGTCATGGTTCCGCGGTCGATCAAGAAGATCGCAGTTGTG
CACCAGGAAGGTAGCAAAAA

Downstream 100 bases:

>100_bases
AACTGAAGCGATCGTCGAACTAACGATCTGGAGAGCGGCGGGGGAAACCCCGCCGTTTTCTTTTGCCGCGCCGCCCCGAT
CGCGCCGGCGTCGACCGATC

Product: flagellin

Products: NA

Alternate protein names: Flagellin Domain Protein; Bacterial Flagellin N-Terminus Domain Protein; Flagellin Domain-Containing Protein; Flagellin Protein C-Terminus; Flagellin Hook IN Repeat-Containing Protein; Flagellin Hook IN Motif Domain Protein; Flagellin-Like Protein; Flagellin Hook IN Repeat Protein; Flagellin-Like

Number of amino acids: Translated: 888; Mature: 887

Protein sequence:

>888_residues
MSGIVLSNAVRQNLSSLQATADLLATTQSRLSSGKKVNSALDNPTNFFTAASLDARASDINNLLDGISSGVQILQAANTG
ITSLTKLVDSAKSIANQALQTTSGYATKSNVSATISGATAEDIRGTQSFDNAVATGNVIFDGTTGGTTAAAGTDTLGGAI
VSIAASAAVTVLGAVDATATGAVLSVGTAAATAAGTNLISELTNGSTVTATGPAAGDSITVNGKTITFTTAGASSKDSSG
NYTIGLDQTVNSLLDTIDTVNGNTGLSSAVTAGRLELHSGTNSPLTVGDNAGGAVLAKLGLTAQTVDTAAATASANISAS
TQLFNTHGGLTTTAIADGTTLSVNGKTITFKTADAPQGNNIPTGTGVLGRIGTDGNGNSTIYLGDQTKFTNATVGDLLTA
IDLANGVKAASISSGVATISTNSGQTASAVAAGITTIQSSTGGDLNVTAFTDLFKNLGLTTSSGTGPLTLTKQRTTSGTT
MGTLIADGSTLNVNGKTITFKNAAVPTASSSHTGISGNVETDGSGNSTVYLQKGTLDDVLKAIDLATGVRVATLGISGAT
IATANGSANSSITSGSLKLSTGLASDLTINGTGNALAALGLTGPSGTSTSFTATRGVAAGSLNGKSLTFSSFNGGSAVNV
TLGDGSNGTVKSLAQLNVALAANNLTASIDNASGKLTIAASNDYASRTLGGADGGVLGGTLASQLTFTVPTAPVADVNAQ
NTRAGLVKQFNDVLDQIKTTAQDSSFNGVNLLNGDNLKLVFNETGKSTISIQGVTFNPTGLGLSTLASGTDFIDNNATNS
VLTKLSAASTALRSQSSAFGSNLSIVQARQDFSKSLINVLQTGSSNLTLADTNEEAANSQALTTRQSIAVSALSLANQSQ
QSVLQLLR

Sequences:

>Translated_888_residues
MSGIVLSNAVRQNLSSLQATADLLATTQSRLSSGKKVNSALDNPTNFFTAASLDARASDINNLLDGISSGVQILQAANTG
ITSLTKLVDSAKSIANQALQTTSGYATKSNVSATISGATAEDIRGTQSFDNAVATGNVIFDGTTGGTTAAAGTDTLGGAI
VSIAASAAVTVLGAVDATATGAVLSVGTAAATAAGTNLISELTNGSTVTATGPAAGDSITVNGKTITFTTAGASSKDSSG
NYTIGLDQTVNSLLDTIDTVNGNTGLSSAVTAGRLELHSGTNSPLTVGDNAGGAVLAKLGLTAQTVDTAAATASANISAS
TQLFNTHGGLTTTAIADGTTLSVNGKTITFKTADAPQGNNIPTGTGVLGRIGTDGNGNSTIYLGDQTKFTNATVGDLLTA
IDLANGVKAASISSGVATISTNSGQTASAVAAGITTIQSSTGGDLNVTAFTDLFKNLGLTTSSGTGPLTLTKQRTTSGTT
MGTLIADGSTLNVNGKTITFKNAAVPTASSSHTGISGNVETDGSGNSTVYLQKGTLDDVLKAIDLATGVRVATLGISGAT
IATANGSANSSITSGSLKLSTGLASDLTINGTGNALAALGLTGPSGTSTSFTATRGVAAGSLNGKSLTFSSFNGGSAVNV
TLGDGSNGTVKSLAQLNVALAANNLTASIDNASGKLTIAASNDYASRTLGGADGGVLGGTLASQLTFTVPTAPVADVNAQ
NTRAGLVKQFNDVLDQIKTTAQDSSFNGVNLLNGDNLKLVFNETGKSTISIQGVTFNPTGLGLSTLASGTDFIDNNATNS
VLTKLSAASTALRSQSSAFGSNLSIVQARQDFSKSLINVLQTGSSNLTLADTNEEAANSQALTTRQSIAVSALSLANQSQ
QSVLQLLR
>Mature_887_residues
SGIVLSNAVRQNLSSLQATADLLATTQSRLSSGKKVNSALDNPTNFFTAASLDARASDINNLLDGISSGVQILQAANTGI
TSLTKLVDSAKSIANQALQTTSGYATKSNVSATISGATAEDIRGTQSFDNAVATGNVIFDGTTGGTTAAAGTDTLGGAIV
SIAASAAVTVLGAVDATATGAVLSVGTAAATAAGTNLISELTNGSTVTATGPAAGDSITVNGKTITFTTAGASSKDSSGN
YTIGLDQTVNSLLDTIDTVNGNTGLSSAVTAGRLELHSGTNSPLTVGDNAGGAVLAKLGLTAQTVDTAAATASANISAST
QLFNTHGGLTTTAIADGTTLSVNGKTITFKTADAPQGNNIPTGTGVLGRIGTDGNGNSTIYLGDQTKFTNATVGDLLTAI
DLANGVKAASISSGVATISTNSGQTASAVAAGITTIQSSTGGDLNVTAFTDLFKNLGLTTSSGTGPLTLTKQRTTSGTTM
GTLIADGSTLNVNGKTITFKNAAVPTASSSHTGISGNVETDGSGNSTVYLQKGTLDDVLKAIDLATGVRVATLGISGATI
ATANGSANSSITSGSLKLSTGLASDLTINGTGNALAALGLTGPSGTSTSFTATRGVAAGSLNGKSLTFSSFNGGSAVNVT
LGDGSNGTVKSLAQLNVALAANNLTASIDNASGKLTIAASNDYASRTLGGADGGVLGGTLASQLTFTVPTAPVADVNAQN
TRAGLVKQFNDVLDQIKTTAQDSSFNGVNLLNGDNLKLVFNETGKSTISIQGVTFNPTGLGLSTLASGTDFIDNNATNSV
LTKLSAASTALRSQSSAFGSNLSIVQARQDFSKSLINVLQTGSSNLTLADTNEEAANSQALTTRQSIAVSALSLANQSQQ
SVLQLLR

Specific function: Unknown

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87539; Mature: 87408

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.1 %Met     (Mature Protein)
0.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGIVLSNAVRQNLSSLQATADLLATTQSRLSSGKKVNSALDNPTNFFTAASLDARASDI
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCHHHHH
NNLLDGISSGVQILQAANTGITSLTKLVDSAKSIANQALQTTSGYATKSNVSATISGATA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCH
EDIRGTQSFDNAVATGNVIFDGTTGGTTAAAGTDTLGGAIVSIAASAAVTVLGAVDATAT
HHCCCCCHHCCCEEECCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCC
GAVLSVGTAAATAAGTNLISELTNGSTVTATGPAAGDSITVNGKTITFTTAGASSKDSSG
CCEEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEECCEEEEEEECCCCCCCCCC
NYTIGLDQTVNSLLDTIDTVNGNTGLSSAVTAGRLELHSGTNSPLTVGDNAGGAVLAKLG
CEEEEHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEECCCCCCEEECCCCCCEEEEECC
LTAQTVDTAAATASANISASTQLFNTHGGLTTTAIADGTTLSVNGKTITFKTADAPQGNN
CCHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECCCEEEECCCEEEEEECCCCCCCC
IPTGTGVLGRIGTDGNGNSTIYLGDQTKFTNATVGDLLTAIDLANGVKAASISSGVATIS
CCCCCCCEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCEEEEE
TNSGQTASAVAAGITTIQSSTGGDLNVTAFTDLFKNLGLTTSSGTGPLTLTKQRTTSGTT
CCCCCCHHHHHHHHHEEECCCCCCEEEHHHHHHHHHCCCEECCCCCCEEEEECCCCCCCE
MGTLIADGSTLNVNGKTITFKNAAVPTASSSHTGISGNVETDGSGNSTVYLQKGTLDDVL
EEEEEECCCEEEECCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCEEEEEECCCHHHHH
KAIDLATGVRVATLGISGATIATANGSANSSITSGSLKLSTGLASDLTINGTGNALAALG
HHHHHHCCCEEEEEECCCCEEEECCCCCCCCEECCEEEEECCCCCCEEECCCCCEEEEEE
LTGPSGTSTSFTATRGVAAGSLNGKSLTFSSFNGGSAVNVTLGDGSNGTVKSLAQLNVAL
ECCCCCCCCCEEEECCCEECCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHEEEEE
AANNLTASIDNASGKLTIAASNDYASRTLGGADGGVLGGTLASQLTFTVPTAPVADVNAQ
EECCEEEEEECCCCEEEEEECCCCHHHCCCCCCCCEEHHHHHHCEEEEECCCCCCCCCCC
NTRAGLVKQFNDVLDQIKTTAQDSSFNGVNLLNGDNLKLVFNETGKSTISIQGVTFNPTG
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCEEEEEEEEEECCCC
LGLSTLASGTDFIDNNATNSVLTKLSAASTALRSQSSAFGSNLSIVQARQDFSKSLINVL
CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHH
QTGSSNLTLADTNEEAANSQALTTRQSIAVSALSLANQSQQSVLQLLR
HCCCCCEEEEECCCHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
>Mature Secondary Structure 
SGIVLSNAVRQNLSSLQATADLLATTQSRLSSGKKVNSALDNPTNFFTAASLDARASDI
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCHHHHH
NNLLDGISSGVQILQAANTGITSLTKLVDSAKSIANQALQTTSGYATKSNVSATISGATA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCH
EDIRGTQSFDNAVATGNVIFDGTTGGTTAAAGTDTLGGAIVSIAASAAVTVLGAVDATAT
HHCCCCCHHCCCEEECCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCC
GAVLSVGTAAATAAGTNLISELTNGSTVTATGPAAGDSITVNGKTITFTTAGASSKDSSG
CCEEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEECCEEEEEEECCCCCCCCCC
NYTIGLDQTVNSLLDTIDTVNGNTGLSSAVTAGRLELHSGTNSPLTVGDNAGGAVLAKLG
CEEEEHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEECCCCCCEEECCCCCCEEEEECC
LTAQTVDTAAATASANISASTQLFNTHGGLTTTAIADGTTLSVNGKTITFKTADAPQGNN
CCHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECCCEEEECCCEEEEEECCCCCCCC
IPTGTGVLGRIGTDGNGNSTIYLGDQTKFTNATVGDLLTAIDLANGVKAASISSGVATIS
CCCCCCCEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCEEEEE
TNSGQTASAVAAGITTIQSSTGGDLNVTAFTDLFKNLGLTTSSGTGPLTLTKQRTTSGTT
CCCCCCHHHHHHHHHEEECCCCCCEEEHHHHHHHHHCCCEECCCCCCEEEEECCCCCCCE
MGTLIADGSTLNVNGKTITFKNAAVPTASSSHTGISGNVETDGSGNSTVYLQKGTLDDVL
EEEEEECCCEEEECCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCEEEEEECCCHHHHH
KAIDLATGVRVATLGISGATIATANGSANSSITSGSLKLSTGLASDLTINGTGNALAALG
HHHHHHCCCEEEEEECCCCEEEECCCCCCCCEECCEEEEECCCCCCEEECCCCCEEEEEE
LTGPSGTSTSFTATRGVAAGSLNGKSLTFSSFNGGSAVNVTLGDGSNGTVKSLAQLNVAL
ECCCCCCCCCEEEECCCEECCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHEEEEE
AANNLTASIDNASGKLTIAASNDYASRTLGGADGGVLGGTLASQLTFTVPTAPVADVNAQ
EECCEEEEEECCCCEEEEEECCCCHHHCCCCCCCCEEHHHHHHCEEEEECCCCCCCCCCC
NTRAGLVKQFNDVLDQIKTTAQDSSFNGVNLLNGDNLKLVFNETGKSTISIQGVTFNPTG
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCEEEEEEEEEECCCC
LGLSTLASGTDFIDNNATNSVLTKLSAASTALRSQSSAFGSNLSIVQARQDFSKSLINVL
CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHH
QTGSSNLTLADTNEEAANSQALTTRQSIAVSALSLANQSQQSVLQLLR
HCCCCCEEEEECCCHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA