| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is rrmA [C]
Identifier: 86750918
GI number: 86750918
Start: 4347207
End: 4347866
Strand: Reverse
Name: rrmA [C]
Synonym: RPB_3809
Alternate gene names: 86750918
Gene position: 4347866-4347207 (Counterclockwise)
Preceding gene: 86750919
Following gene: 86750917
Centisome position: 81.55
GC content: 63.64
Gene sequence:
>660_bases ATGGGCCAGGAAATCGATCTGCTCGTCAACTACCCGCGCACCAAGCGCAATGTCGACGAGCGCGGCCAGACCAAATCCGA AGAGGACCGCGCGGTCGCGCGCCAGTTCGGCAAGGAGTTCTTCGACGGCGACCGCCGCCACGGCTATGGCGGCTTCAACT ACATGCCGCGATTCTGGCAGCCGGTGATTCCGACGTTCCAGGCGCATTTCGGCCTCGACGCGTCGTCGTCGGTGCTCGAC GTCGGCTGCGCCAAGGGCTTCATGCTGCACGACATGGCCGAGCTGATCCCGGGCATCACCGTCAAGGGCGTCGACGTCTC GGCCTATGCGATCGAACACGGCATCGACGACATGAGGCCGCATCTCAGCGTCGCCAGCGCGGTCGATCTGCCGTTCCCGG ACAAATCGTTCGACGTGGTGATCTCGATCAACACCGTGCACAATCTCGTCCGTGACGACTGTGCGAGGGCGCTGCGCGAG ATCGAGCGGGTGGCGCGCCGCGGCGCCTTCATCACGGTGGATGCCTATCGCGACGAGGAGGAGAGGCGTCGGATGATGGC GTGGAACCTCACCGCGCAGACCATCATGCATGTCGACGAATGGACCGCGTTCTTCGACGAGATCGGCTACACCGGCGACT ACTACTGGTTCATCCCATGA
Upstream 100 bases:
>100_bases TGGAGCAGGGCATCGACGATACCATCCGCTGGGTCGATCGCTGGTTCGATGTGTTGAAGGACCAACCTTTCGACTATGCG CACAAGCCTTGAGGACATCG
Downstream 100 bases:
>100_bases TCGGGTTGGTGCCATGAGCGAGCTGCCGCGCCGCCTGCTGTTTGACATGATGCGCATCCGCGCCGTCGAGGAGACGATCG CTAAGCGCTACGGCGAGCAG
Product: SAM binding protein
Products: S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]
Alternate protein names: Methyltransferase Type; SAM-Dependent Methyltransferase; Protein-L-Isoaspartate(D-Aspartate) O-Methyltransferase; S-Adenosyl-L-Methionine-Dependent Methyltransferase
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MGQEIDLLVNYPRTKRNVDERGQTKSEEDRAVARQFGKEFFDGDRRHGYGGFNYMPRFWQPVIPTFQAHFGLDASSSVLD VGCAKGFMLHDMAELIPGITVKGVDVSAYAIEHGIDDMRPHLSVASAVDLPFPDKSFDVVISINTVHNLVRDDCARALRE IERVARRGAFITVDAYRDEEERRRMMAWNLTAQTIMHVDEWTAFFDEIGYTGDYYWFIP
Sequences:
>Translated_219_residues MGQEIDLLVNYPRTKRNVDERGQTKSEEDRAVARQFGKEFFDGDRRHGYGGFNYMPRFWQPVIPTFQAHFGLDASSSVLD VGCAKGFMLHDMAELIPGITVKGVDVSAYAIEHGIDDMRPHLSVASAVDLPFPDKSFDVVISINTVHNLVRDDCARALRE IERVARRGAFITVDAYRDEEERRRMMAWNLTAQTIMHVDEWTAFFDEIGYTGDYYWFIP >Mature_218_residues GQEIDLLVNYPRTKRNVDERGQTKSEEDRAVARQFGKEFFDGDRRHGYGGFNYMPRFWQPVIPTFQAHFGLDASSSVLDV GCAKGFMLHDMAELIPGITVKGVDVSAYAIEHGIDDMRPHLSVASAVDLPFPDKSFDVVISINTVHNLVRDDCARALREI ERVARRGAFITVDAYRDEEERRRMMAWNLTAQTIMHVDEWTAFFDEIGYTGDYYWFIP
Specific function: Specifically Methylates The Guanosine In Position 745 Of 23s rRNA. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.51 [C]
Molecular weight: Translated: 25121; Mature: 24989
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQEIDLLVNYPRTKRNVDERGQTKSEEDRAVARQFGKEFFDGDRRHGYGGFNYMPRFWQ CCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH PVIPTFQAHFGLDASSSVLDVGCAKGFMLHDMAELIPGITVKGVDVSAYAIEHGIDDMRP HHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCEEECCCHHHHHHHHCHHHHHH HLSVASAVDLPFPDKSFDVVISINTVHNLVRDDCARALREIERVARRGAFITVDAYRDEE HHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHH ERRRMMAWNLTAQTIMHVDEWTAFFDEIGYTGDYYWFIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC >Mature Secondary Structure GQEIDLLVNYPRTKRNVDERGQTKSEEDRAVARQFGKEFFDGDRRHGYGGFNYMPRFWQ CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH PVIPTFQAHFGLDASSSVLDVGCAKGFMLHDMAELIPGITVKGVDVSAYAIEHGIDDMRP HHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCEEECCCHHHHHHHHCHHHHHH HLSVASAVDLPFPDKSFDVVISINTVHNLVRDDCARALREIERVARRGAFITVDAYRDEE HHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHH ERRRMMAWNLTAQTIMHVDEWTAFFDEIGYTGDYYWFIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Unidentified protein factor B [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-methionine; rRNA [C]
Specific reaction: S-Adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]
General reaction: Methyl group transfer [C]
Inhibitor: Mg2+; Unidentified protein factor A1 [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA