Click here to switch to the map view.

The map label for this gene is 86750912

Identifier: 86750912

GI number: 86750912

Start: 4340759

End: 4341565

Strand: Reverse

Name: 86750912

Synonym: RPB_3803

Alternate gene names: NA

Gene position: 4341565-4340759 (Counterclockwise)

Preceding gene: 86750913

Following gene: 86750911

Centisome position: 81.43

GC content: 65.3

Gene sequence:

>807_bases
ATGCCCGGCAGTGTGATCATCGCGGCGATCTCCAGCGACATCGGCGTGCAACTGGCGAGGCTGTATCGCGCGCAGGGCTT
CGCGGTGATCGGGACCTATCGCTCGACCGAAGACCTGGATCAACTGAAGGCCGACGCCGGCATACATCTGGTGCCTTGCG
ATTTGTCGGACGCTGACAGCGTGCGGCGAGCGAGCGCCGAGATCGCGGCGCTGAACAAGCCGTGGGAGCGCTTCATCAGC
GCGGCGGGGCAATTGTCGCCGATCGGCGATTTCTTCGGGCGCGATTTCGGCGAATGGGAAGCGTCGCTGTCGTTGAATGC
GGTGGCGCAGATGCGGCTGCTGCACGCGCTCTATCCGCTGCGTCAGACCAGCGCCGTGGCGAAGGTGGCGTTCCTGGTCG
GCGGCGGCATCAACGGACCGTTCCGCAACTACTCGGCTTATTGTCTCGGCAAGGTGATGCTGCTGAAGCTGTGCGAACTG
CTCGACGATGAATATCCGGACGTCCATGCCATCGCGGTCGGCACCGGCTGGGTCAACACCAAGATCCATCGCCAGACCGT
CGCGGCTGGTGACTCCGCCGGTGTCAATCTCCGCCGCACGCTGGAATTTCTCGACAGCGGCCAGCAGGGCACCAGCATCC
CGGATATTCTCGGCTGCATCGAATGGGCATTCGGCGCTGGCCGCGCCGCCACCGGCGGGCGCAATTTCTCGGTGGTGCAC
GATGCCTGGCGCGACGGCGGCGCGACGCTGGCCGCGCGGCTCGAAGCCGACGGCAACATCTACAAGCTGCGGCGGCACGG
CAATTGA

Upstream 100 bases:

>100_bases
GGGGGATGATCCCTGGTTCGGCCTGATGACCGACAACGATGGCACGCTGGCCAAGGCGTTCGCGCGCGCGGCGGCGAAGA
CCTATGGCGGAGCACGCTAG

Downstream 100 bases:

>100_bases
GCGCGCCCGCCCGCATCAGGAGGTTCGCGTGAAGCTCTCCGACTACGTCATCGACTTCCTCGCGCAGCGCGGCGTCAGCC
ATGTGTTCGGCATTTCCGGC

Product: Short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MPGSVIIAAISSDIGVQLARLYRAQGFAVIGTYRSTEDLDQLKADAGIHLVPCDLSDADSVRRASAEIAALNKPWERFIS
AAGQLSPIGDFFGRDFGEWEASLSLNAVAQMRLLHALYPLRQTSAVAKVAFLVGGGINGPFRNYSAYCLGKVMLLKLCEL
LDDEYPDVHAIAVGTGWVNTKIHRQTVAAGDSAGVNLRRTLEFLDSGQQGTSIPDILGCIEWAFGAGRAATGGRNFSVVH
DAWRDGGATLAARLEADGNIYKLRRHGN

Sequences:

>Translated_268_residues
MPGSVIIAAISSDIGVQLARLYRAQGFAVIGTYRSTEDLDQLKADAGIHLVPCDLSDADSVRRASAEIAALNKPWERFIS
AAGQLSPIGDFFGRDFGEWEASLSLNAVAQMRLLHALYPLRQTSAVAKVAFLVGGGINGPFRNYSAYCLGKVMLLKLCEL
LDDEYPDVHAIAVGTGWVNTKIHRQTVAAGDSAGVNLRRTLEFLDSGQQGTSIPDILGCIEWAFGAGRAATGGRNFSVVH
DAWRDGGATLAARLEADGNIYKLRRHGN
>Mature_267_residues
PGSVIIAAISSDIGVQLARLYRAQGFAVIGTYRSTEDLDQLKADAGIHLVPCDLSDADSVRRASAEIAALNKPWERFISA
AGQLSPIGDFFGRDFGEWEASLSLNAVAQMRLLHALYPLRQTSAVAKVAFLVGGGINGPFRNYSAYCLGKVMLLKLCELL
DDEYPDVHAIAVGTGWVNTKIHRQTVAAGDSAGVNLRRTLEFLDSGQQGTSIPDILGCIEWAFGAGRAATGGRNFSVVHD
AWRDGGATLAARLEADGNIYKLRRHGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28746; Mature: 28615

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGSVIIAAISSDIGVQLARLYRAQGFAVIGTYRSTEDLDQLKADAGIHLVPCDLSDADS
CCCCEEEEEECCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCCCEEEECCCCCHHH
VRRASAEIAALNKPWERFISAAGQLSPIGDFFGRDFGEWEASLSLNAVAQMRLLHALYPL
HHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RQTSAVAKVAFLVGGGINGPFRNYSAYCLGKVMLLKLCELLDDEYPDVHAIAVGTGWVNT
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
KIHRQTVAAGDSAGVNLRRTLEFLDSGQQGTSIPDILGCIEWAFGAGRAATGGRNFSVVH
EEHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEH
DAWRDGGATLAARLEADGNIYKLRRHGN
HHHCCCCCEEEEEEECCCCEEEEEECCC
>Mature Secondary Structure 
PGSVIIAAISSDIGVQLARLYRAQGFAVIGTYRSTEDLDQLKADAGIHLVPCDLSDADS
CCCEEEEEECCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCCCEEEECCCCCHHH
VRRASAEIAALNKPWERFISAAGQLSPIGDFFGRDFGEWEASLSLNAVAQMRLLHALYPL
HHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RQTSAVAKVAFLVGGGINGPFRNYSAYCLGKVMLLKLCELLDDEYPDVHAIAVGTGWVNT
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
KIHRQTVAAGDSAGVNLRRTLEFLDSGQQGTSIPDILGCIEWAFGAGRAATGGRNFSVVH
EEHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEH
DAWRDGGATLAARLEADGNIYKLRRHGN
HHHCCCCCEEEEEEECCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA