| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is ilvB [H]
Identifier: 86750911
GI number: 86750911
Start: 4338928
End: 4340730
Strand: Reverse
Name: ilvB [H]
Synonym: RPB_3802
Alternate gene names: 86750911
Gene position: 4340730-4338928 (Counterclockwise)
Preceding gene: 86750912
Following gene: 86750909
Centisome position: 81.41
GC content: 67.67
Gene sequence:
>1803_bases GTGAAGCTCTCCGACTACGTCATCGACTTCCTCGCGCAGCGCGGCGTCAGCCATGTGTTCGGCATTTCCGGCGGCGCGGC GGTGCATATGTTCGATTCGGCGGCGAAGCATCCGGATGTCACGCCGATCTTCCCGCAGCACGAGCAGGCCGCCGCGATCG CCGCCGACGGCTACGCGCGCGCCACCGGCAAGCTCGGCGTCGCCATCACCACCTCCGGCCCCGGCGCGACCAATCTGCTG ACCGGGGTGTGCTGCGCGTATTATGATTCAGTGCCGACGCTGATGATCACCGGGCAGGTCGCGACGCATCGGCTCAAGGG CAACAACGACGTCCGCCAGCTAGGCTTCCAGGAGACCGACGTGACGTCGATCTTCGCCACGGTGACGAAATATGCGGTGC AGATCTCCGATCCCGCGACGATCCGCTATCATCTGGAAAAGGCCTACTATCTCGCCTTCGAGGGCCGGCCCGGCGCGGTG CTGATCGATCTGCCGGACGATCTGCAGCGCGCCGAGATCGATCCGGAGGCGCTGGCGTCGTTCGTGCCGGAGACGCAGAT CGCCACGACCGATCTCGACGCCGAGATCGTCGCCTTGCTGCCGCTGATCGCGCAGGCGAAGCGACCGGTGCTGGTGCTGG GCGGCGGGCTGTCGACGCCGCGGATCGGCGCCGCGCTCGATCAACTGATCGACCGGCTCGCCATGCCGGTGCTGACGACC TGGGCCGCGACCGATCTGATCGCGCATGATCATCCGCTGCGGGTCGGGCCGTTCGGTGTTTACGGGCCGCGGCTCGGCAA TTTCACCGTGCAGAATGCCGACCTCATTCTCTGCCTCGGCAGCCGGCTGTCGCAGAACGTCACCGGCGGCATCCTGCCGT CGTTCGCGCGCGAGGCGACGATCGTGATGGTCGACGCCAGCCGCGGCGAGATGGACAAGTTCGACGCGCGCGGCATCGCC GTCGCGACGCGGATCGAGGCGCGGCTCGACGGGTTCGTGCCGAAGCTGCTCGGAGCGATCGAGGCCGCGCCGCCGCGCGA CGAATGGCTGGCGCAGATCGCGCATTGGCGTAGCGCGCTGCCGGACGATCGTCCCGGTCCCGCGCCCGCCAATGCAGGCT TCGTGGACGCCTACGACTTCGTCGACAAGTTGAGCGAGACCGCGCCCGCCGACGAGCTGATCTATGTCGACACCGGCGGC AATCTGACCTGGACCTGCAACGGCTTCCGCATCCAGCGCGGCCAGCGGCTGATCTCCGACTGGAACAACACCGCGATGGG CTATGCGCTGCCGGCCGCGATCGGCGCGGCGGTGCAGGCGAAGGGCGGGGTGAGCTGCATCATCGGCGATGGCGGCCTGA TGCTGTCGCTCGGCGAACTGGCGCTGCTGTCGCGTCACAGGCTGCCGGTGCGGCTGTTCCTGTTCAACAATCACGGGCAC GGCATCCAGAAGCAGACATTGGAGACCTGGCTCGACGGCAACTATGTCGGCGTCGATGCGCCGAGCGGATTGTCGTTCGT CGATGTCGCCAAGGTCGCCGAGGCGATGGACCTGCCGGTGGTCACGATCAGCCGCAGCGCGGACATCGCCGCCAAGCTGC GCGAGGTCTATGCGCGGCAGGGACCGGTGTTCTGCAATGTCGAGATCAATCCCGCGCAGAAGCTGTATCCGGTGCTGAAA TTCGGCGCGCCGCTGGAAAGCCAGATGCCGGCGATCGACGACGCGCTGATCGCGCGCGAGATGATCGTGCCGCCGTTCGT CCCCGGCGCGGCGCCGAAGCACAGCGGCGGCGCGGGGGTGTGA
Upstream 100 bases:
>100_bases GGCGGCGCGACGCTGGCCGCGCGGCTCGAAGCCGACGGCAACATCTACAAGCTGCGGCGGCACGGCAATTGAGCGCGCCC GCCCGCATCAGGAGGTTCGC
Downstream 100 bases:
>100_bases GGCTGCGGAATGCTGAGTGTATTGCGTGTTCGCTTACTTGCTCGGCTCATACTGAATCGCCACTCGCTCTACCGTCATCC TGAGGCGCGAGCGCAGCGAG
Product: acetolactate synthase large subunit
Products: NA
Alternate protein names: AHAS-I; Acetohydroxy-acid synthase I large subunit; ALS-I [H]
Number of amino acids: Translated: 600; Mature: 600
Protein sequence:
>600_residues MKLSDYVIDFLAQRGVSHVFGISGGAAVHMFDSAAKHPDVTPIFPQHEQAAAIAADGYARATGKLGVAITTSGPGATNLL TGVCCAYYDSVPTLMITGQVATHRLKGNNDVRQLGFQETDVTSIFATVTKYAVQISDPATIRYHLEKAYYLAFEGRPGAV LIDLPDDLQRAEIDPEALASFVPETQIATTDLDAEIVALLPLIAQAKRPVLVLGGGLSTPRIGAALDQLIDRLAMPVLTT WAATDLIAHDHPLRVGPFGVYGPRLGNFTVQNADLILCLGSRLSQNVTGGILPSFAREATIVMVDASRGEMDKFDARGIA VATRIEARLDGFVPKLLGAIEAAPPRDEWLAQIAHWRSALPDDRPGPAPANAGFVDAYDFVDKLSETAPADELIYVDTGG NLTWTCNGFRIQRGQRLISDWNNTAMGYALPAAIGAAVQAKGGVSCIIGDGGLMLSLGELALLSRHRLPVRLFLFNNHGH GIQKQTLETWLDGNYVGVDAPSGLSFVDVAKVAEAMDLPVVTISRSADIAAKLREVYARQGPVFCNVEINPAQKLYPVLK FGAPLESQMPAIDDALIAREMIVPPFVPGAAPKHSGGAGV
Sequences:
>Translated_600_residues MKLSDYVIDFLAQRGVSHVFGISGGAAVHMFDSAAKHPDVTPIFPQHEQAAAIAADGYARATGKLGVAITTSGPGATNLL TGVCCAYYDSVPTLMITGQVATHRLKGNNDVRQLGFQETDVTSIFATVTKYAVQISDPATIRYHLEKAYYLAFEGRPGAV LIDLPDDLQRAEIDPEALASFVPETQIATTDLDAEIVALLPLIAQAKRPVLVLGGGLSTPRIGAALDQLIDRLAMPVLTT WAATDLIAHDHPLRVGPFGVYGPRLGNFTVQNADLILCLGSRLSQNVTGGILPSFAREATIVMVDASRGEMDKFDARGIA VATRIEARLDGFVPKLLGAIEAAPPRDEWLAQIAHWRSALPDDRPGPAPANAGFVDAYDFVDKLSETAPADELIYVDTGG NLTWTCNGFRIQRGQRLISDWNNTAMGYALPAAIGAAVQAKGGVSCIIGDGGLMLSLGELALLSRHRLPVRLFLFNNHGH GIQKQTLETWLDGNYVGVDAPSGLSFVDVAKVAEAMDLPVVTISRSADIAAKLREVYARQGPVFCNVEINPAQKLYPVLK FGAPLESQMPAIDDALIAREMIVPPFVPGAAPKHSGGAGV >Mature_600_residues MKLSDYVIDFLAQRGVSHVFGISGGAAVHMFDSAAKHPDVTPIFPQHEQAAAIAADGYARATGKLGVAITTSGPGATNLL TGVCCAYYDSVPTLMITGQVATHRLKGNNDVRQLGFQETDVTSIFATVTKYAVQISDPATIRYHLEKAYYLAFEGRPGAV LIDLPDDLQRAEIDPEALASFVPETQIATTDLDAEIVALLPLIAQAKRPVLVLGGGLSTPRIGAALDQLIDRLAMPVLTT WAATDLIAHDHPLRVGPFGVYGPRLGNFTVQNADLILCLGSRLSQNVTGGILPSFAREATIVMVDASRGEMDKFDARGIA VATRIEARLDGFVPKLLGAIEAAPPRDEWLAQIAHWRSALPDDRPGPAPANAGFVDAYDFVDKLSETAPADELIYVDTGG NLTWTCNGFRIQRGQRLISDWNNTAMGYALPAAIGAAVQAKGGVSCIIGDGGLMLSLGELALLSRHRLPVRLFLFNNHGH GIQKQTLETWLDGNYVGVDAPSGLSFVDVAKVAEAMDLPVVTISRSADIAAKLREVYARQGPVFCNVEINPAQKLYPVLK FGAPLESQMPAIDDALIAREMIVPPFVPGAAPKHSGGAGV
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=487, Percent_Identity=24.0246406570842, Blast_Score=119, Evalue=8e-27, Organism=Homo sapiens, GI21361361, Length=562, Percent_Identity=23.6654804270463, Blast_Score=107, Evalue=3e-23, Organism=Escherichia coli, GI1790104, Length=564, Percent_Identity=30.6737588652482, Blast_Score=263, Evalue=3e-71, Organism=Escherichia coli, GI87081685, Length=572, Percent_Identity=29.8951048951049, Blast_Score=229, Evalue=5e-61, Organism=Escherichia coli, GI1786717, Length=554, Percent_Identity=28.3393501805054, Blast_Score=180, Evalue=3e-46, Organism=Escherichia coli, GI1787096, Length=553, Percent_Identity=23.3273056057866, Blast_Score=130, Evalue=3e-31, Organism=Escherichia coli, GI1788716, Length=566, Percent_Identity=23.8515901060071, Blast_Score=111, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17531299, Length=489, Percent_Identity=25.3578732106339, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17531301, Length=489, Percent_Identity=25.3578732106339, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17542570, Length=513, Percent_Identity=25.1461988304094, Blast_Score=97, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6323755, Length=587, Percent_Identity=29.3015332197615, Blast_Score=232, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6320123, Length=548, Percent_Identity=23.3576642335766, Blast_Score=95, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6323073, Length=510, Percent_Identity=26.4705882352941, Blast_Score=94, Evalue=7e-20, Organism=Saccharomyces cerevisiae, GI6321524, Length=516, Percent_Identity=24.6124031007752, Blast_Score=92, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6323163, Length=510, Percent_Identity=25.8823529411765, Blast_Score=88, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6320816, Length=309, Percent_Identity=24.9190938511327, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI19922626, Length=516, Percent_Identity=25.968992248062, Blast_Score=130, Evalue=3e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 63852; Mature: 63852
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSDYVIDFLAQRGVSHVFGISGGAAVHMFDSAAKHPDVTPIFPQHEQAAAIAADGYAR CCHHHHHHHHHHHCCCCEEEECCCCCEEEEEHHHCCCCCCCCCCCCCCCCCEEECCCCCC ATGKLGVAITTSGPGATNLLTGVCCAYYDSVPTLMITGQVATHRLKGNNDVRQLGFQETD CCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCHHEEEECCCCHHHHCCCCHHH VTSIFATVTKYAVQISDPATIRYHLEKAYYLAFEGRPGAVLIDLPDDLQRAEIDPEALAS HHHHHHHHHHHEEEECCCCEEEEEEEEEEEEEEECCCCEEEEECCCCHHHCCCCHHHHHH FVPETQIATTDLDAEIVALLPLIAQAKRPVLVLGGGLSTPRIGAALDQLIDRLAMPVLTT HCCCCCEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH WAATDLIAHDHPLRVGPFGVYGPRLGNFTVQNADLILCLGSRLSQNVTGGILPSFAREAT HHHHHHHCCCCCCEECCCCCCCCCCCCEEECCCCEEEEECCHHCCCCCCCCCHHHCCCEE IVMVDASRGEMDKFDARGIAVATRIEARLDGFVPKLLGAIEAAPPRDEWLAQIAHWRSAL EEEEECCCCCCCHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC PDDRPGPAPANAGFVDAYDFVDKLSETAPADELIYVDTGGNLTWTCNGFRIQRGQRLISD CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCEEEECCHHHHHC WNNTAMGYALPAAIGAAVQAKGGVSCIIGDGGLMLSLGELALLSRHRLPVRLFLFNNHGH CCCCCCCCHHHHHHHHHEECCCCEEEEEECCCEEEEHHHHHHHHCCCCCEEEEEECCCCC GIQKQTLETWLDGNYVGVDAPSGLSFVDVAKVAEAMDLPVVTISRSADIAAKLREVYARQ CCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHC GPVFCNVEINPAQKLYPVLKFGAPLESQMPAIDDALIAREMIVPPFVPGAAPKHSGGAGV CCEEEEEEECCHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKLSDYVIDFLAQRGVSHVFGISGGAAVHMFDSAAKHPDVTPIFPQHEQAAAIAADGYAR CCHHHHHHHHHHHCCCCEEEECCCCCEEEEEHHHCCCCCCCCCCCCCCCCCEEECCCCCC ATGKLGVAITTSGPGATNLLTGVCCAYYDSVPTLMITGQVATHRLKGNNDVRQLGFQETD CCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCHHEEEECCCCHHHHCCCCHHH VTSIFATVTKYAVQISDPATIRYHLEKAYYLAFEGRPGAVLIDLPDDLQRAEIDPEALAS HHHHHHHHHHHEEEECCCCEEEEEEEEEEEEEEECCCCEEEEECCCCHHHCCCCHHHHHH FVPETQIATTDLDAEIVALLPLIAQAKRPVLVLGGGLSTPRIGAALDQLIDRLAMPVLTT HCCCCCEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH WAATDLIAHDHPLRVGPFGVYGPRLGNFTVQNADLILCLGSRLSQNVTGGILPSFAREAT HHHHHHHCCCCCCEECCCCCCCCCCCCEEECCCCEEEEECCHHCCCCCCCCCHHHCCCEE IVMVDASRGEMDKFDARGIAVATRIEARLDGFVPKLLGAIEAAPPRDEWLAQIAHWRSAL EEEEECCCCCCCHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC PDDRPGPAPANAGFVDAYDFVDKLSETAPADELIYVDTGGNLTWTCNGFRIQRGQRLISD CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCEEEECCHHHHHC WNNTAMGYALPAAIGAAVQAKGGVSCIIGDGGLMLSLGELALLSRHRLPVRLFLFNNHGH CCCCCCCCHHHHHHHHHEECCCCEEEEEECCCEEEEHHHHHHHHCCCCCEEEEEECCCCC GIQKQTLETWLDGNYVGVDAPSGLSFVDVAKVAEAMDLPVVTISRSADIAAKLREVYARQ CCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHC GPVFCNVEINPAQKLYPVLKFGAPLESQMPAIDDALIAREMIVPPFVPGAAPKHSGGAGV CCEEEEEEECCHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2989782; 2989781; 7686882; 9278503 [H]