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The map label for this gene is yfeD [H]

Identifier: 86750516

GI number: 86750516

Start: 3891189

End: 3892046

Strand: Direct

Name: yfeD [H]

Synonym: RPB_3405

Alternate gene names: 86750516

Gene position: 3891189-3892046 (Clockwise)

Preceding gene: 86750515

Following gene: 86750523

Centisome position: 72.98

GC content: 66.32

Gene sequence:

>858_bases
GTGAGCGAGCTGTTCGACTGGTTCGCCGGGCCGCTGGCCTATCCCTTCATGCAGCGCGCGCTGGTGATATCGGTGATGGT
CGCGGCGGTCTGCGCCGTGCTGTCCTGCTACCTGGTGCTCAAGGGCTGGTCGCTGATGGGCGACGCCGTCTCCCACGCGG
TGCTGCCCGGCATCGTGCTCGCCCATGTGCTGAACCTGCCCTACGCGATCGGCGCGTTCGCTGCCGGCCTGTCCTGCGCG
GTGTTCACCGGATATTTGACCGCGAACAGCCGGGTGAAGGAGGACACGGTGATGGGCATCGTGTTTTCCGGCATGTTCGG
CCTCGGCCTCGTGATGTTCACCAAGATCGAGACCGACCAGCATCTCAACCACATCCTGTTCGGAAACGTTCTCGGCGTCA
CGCCGCGCGACCTGATCGAAACGGCGATCGTCGCCGGCGGCACGCTGCTCGTCGTGCTGCTGAAAGGCCGCGATCTGCTG
CTCTACTGCTTCGATCCCAACCACGCCCGCTCGATCGGCCTGCCGGTCGTCTGGCTGCATTACGGGCTGCTGGTGCTGCT
CGCGCTGACCATCGTCGCGTCGCTGAAGGCGGTCGGGATCATCCTGGTCGTGGCGATGCTGGTCGCGCCCGGCGCTACCG
CCTATCTGCTGACCGACAGCTTCGACCGCATGCTGGTGATCGCCACCGTCGTCGCGACCAGCTCGGCCGCGCTCGGGACG
CTGATCAGCTTCCATATCGACGGCGCGACCGGCGCCTGCATCGTGCTGACCCAGGCGGTGGTCTTCGTGCTGGCGTTTCT
GTTTGCGCCGAAGCGGGGTCTGTTACGACAGGCCGGCGGAGTCGGCAGCCGCCCCTGA

Upstream 100 bases:

>100_bases
CGCTGCAGACGCTGGTGTTCCTGACGGCGTTCTATCTGGCGCCGAAGCACGGCCTGCTGGCGGCGCGCGGGCGCCGGCTC
GCCGCCGCGGAGGCCGGGTC

Downstream 100 bases:

>100_bases
GCGATCCGGATGCGGCACCCGTGGCGCGCGGACGTCGACCCGCTCGCCCACCGACCGGGCGTGGACCAACCCGACGCCGC
TCAGCCCGGCATCCGTCGGA

Product: hypothetical protein

Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSELFDWFAGPLAYPFMQRALVISVMVAAVCAVLSCYLVLKGWSLMGDAVSHAVLPGIVLAHVLNLPYAIGAFAAGLSCA
VFTGYLTANSRVKEDTVMGIVFSGMFGLGLVMFTKIETDQHLNHILFGNVLGVTPRDLIETAIVAGGTLLVVLLKGRDLL
LYCFDPNHARSIGLPVVWLHYGLLVLLALTIVASLKAVGIILVVAMLVAPGATAYLLTDSFDRMLVIATVVATSSAALGT
LISFHIDGATGACIVLTQAVVFVLAFLFAPKRGLLRQAGGVGSRP

Sequences:

>Translated_285_residues
MSELFDWFAGPLAYPFMQRALVISVMVAAVCAVLSCYLVLKGWSLMGDAVSHAVLPGIVLAHVLNLPYAIGAFAAGLSCA
VFTGYLTANSRVKEDTVMGIVFSGMFGLGLVMFTKIETDQHLNHILFGNVLGVTPRDLIETAIVAGGTLLVVLLKGRDLL
LYCFDPNHARSIGLPVVWLHYGLLVLLALTIVASLKAVGIILVVAMLVAPGATAYLLTDSFDRMLVIATVVATSSAALGT
LISFHIDGATGACIVLTQAVVFVLAFLFAPKRGLLRQAGGVGSRP
>Mature_284_residues
SELFDWFAGPLAYPFMQRALVISVMVAAVCAVLSCYLVLKGWSLMGDAVSHAVLPGIVLAHVLNLPYAIGAFAAGLSCAV
FTGYLTANSRVKEDTVMGIVFSGMFGLGLVMFTKIETDQHLNHILFGNVLGVTPRDLIETAIVAGGTLLVVLLKGRDLLL
YCFDPNHARSIGLPVVWLHYGLLVLLALTIVASLKAVGIILVVAMLVAPGATAYLLTDSFDRMLVIATVVATSSAALGTL
ISFHIDGATGACIVLTQAVVFVLAFLFAPKRGLLRQAGGVGSRP

Specific function: Part of an ATP-driven transport system yfeABCD for chelated iron [H]

COG id: COG1108

COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-3 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1788166, Length=246, Percent_Identity=28.4552845528455, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001626 [H]

Pfam domain/function: PF00950 ABC-3 [H]

EC number: NA

Molecular weight: Translated: 30016; Mature: 29885

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELFDWFAGPLAYPFMQRALVISVMVAAVCAVLSCYLVLKGWSLMGDAVSHAVLPGIVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
AHVLNLPYAIGAFAAGLSCAVFTGYLTANSRVKEDTVMGIVFSGMFGLGLVMFTKIETDQ
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
HLNHILFGNVLGVTPRDLIETAIVAGGTLLVVLLKGRDLLLYCFDPNHARSIGLPVVWLH
HHHHHHHCCCCCCCHHHHHHHHHHCCCHHEEEEECCCCEEEEEECCCCCCCCCCHHHHHH
YGLLVLLALTIVASLKAVGIILVVAMLVAPGATAYLLTDSFDRMLVIATVVATSSAALGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCHHHHHH
LISFHIDGATGACIVLTQAVVFVLAFLFAPKRGLLRQAGGVGSRP
HHHEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
SELFDWFAGPLAYPFMQRALVISVMVAAVCAVLSCYLVLKGWSLMGDAVSHAVLPGIVL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
AHVLNLPYAIGAFAAGLSCAVFTGYLTANSRVKEDTVMGIVFSGMFGLGLVMFTKIETDQ
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
HLNHILFGNVLGVTPRDLIETAIVAGGTLLVVLLKGRDLLLYCFDPNHARSIGLPVVWLH
HHHHHHHCCCCCCCHHHHHHHHHHCCCHHEEEEECCCCEEEEEECCCCCCCCCCHHHHHH
YGLLVLLALTIVASLKAVGIILVVAMLVAPGATAYLLTDSFDRMLVIATVVATSSAALGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCHHHHHH
LISFHIDGATGACIVLTQAVVFVLAFLFAPKRGLLRQAGGVGSRP
HHHEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Zn (II) [Periplasm]; H2O; ATP [C]

Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9495751; 11586360; 12142430 [H]