| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is envR [C]
Identifier: 86750523
GI number: 86750523
Start: 3899604
End: 3900224
Strand: Direct
Name: envR [C]
Synonym: RPB_3412
Alternate gene names: 86750523
Gene position: 3899604-3900224 (Clockwise)
Preceding gene: 86750516
Following gene: 86750524
Centisome position: 73.14
GC content: 59.9
Gene sequence:
>621_bases ATGCCTCCCGAAGCCAAGAAGCGCGCCCGACGCAAAGCCGAGCGCCCCGCCGAAATCCTCGATGCCGCCTTCGAGGAGTT CGTGAAGCATGGCTATTCAGCCACCCGTCTCGAGGACGTCGCAGCGCTGGCCGGGGTGACGAAAGGGACCATCTATTTTT ACTTCGACACCAAAGAGCGGGTGTTCGAGGAAATGGTTCGGCACAAATCCATGGAGTTCCTACCTCGATTGGGGGACTAC GCCGCCACCCTCACCGGCTCGCACACGGATCGGCTGCGCGCGATGGTCGTCTTCGCCTACGCCCACATCTCGGAGAACAG GGCCTCCCGAGAGATCCTGCGCTTCCTGATTTCCGAGGGTGCGCGATTTCCCGATCTGGTCGATAGACATTACGAAGAGT TCGTCGAGCCGATGATGCAACACTTCAAGAAAGTGATCGATGCAGGCGTCGCCGCGGGTGAATTCCGAGATGCTCCCGCA ACGGAGTTCGTCGAAATCGTGATGAGTCCGGCCCTGTTGATCAGCCTGTGGTCGCTGCTTTTCGGAACCCGCAAACGCTT CGATATGGACTCGTTCACCGAGGCCAGCACCGATCTGCTGCTCCGGGGGCTGATCCGGTAG
Upstream 100 bases:
>100_bases AACATGGTGGGTTGGCTCATTTGATCGACCGTGTTGCTCTGCAATAATATTGACTGACTCGAAAGTCAATAGTAGGCTGC GAACGATTGGAGTTCCTGCA
Downstream 100 bases:
>100_bases ACCATCGAAGGAGTGTAAGTGAGTGCAGACGCTGCGATAGCCTGAGACAGTTCCGAGGGAACATTCCGGCAACCAGCCGT GCATAACGGGTCAGCCATGG
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator Tetr Family; Transcription Regulator TetR Family; Transcriptional Regulator Protein Tetr/Acrr-Family; Transcriptional Regulator TetR Family Protein; Transcriptional Regulatory Protein; Regulatory Protein Tetr; TetR Family Transcription Regulator Protein; Transcriptional Regulator Protein; TetR Family Regulatory Protein; TRANSCRIPTIONal REGULATOR PROTEIN TetR/AcrR-Family
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MPPEAKKRARRKAERPAEILDAAFEEFVKHGYSATRLEDVAALAGVTKGTIYFYFDTKERVFEEMVRHKSMEFLPRLGDY AATLTGSHTDRLRAMVVFAYAHISENRASREILRFLISEGARFPDLVDRHYEEFVEPMMQHFKKVIDAGVAAGEFRDAPA TEFVEIVMSPALLISLWSLLFGTRKRFDMDSFTEASTDLLLRGLIR
Sequences:
>Translated_206_residues MPPEAKKRARRKAERPAEILDAAFEEFVKHGYSATRLEDVAALAGVTKGTIYFYFDTKERVFEEMVRHKSMEFLPRLGDY AATLTGSHTDRLRAMVVFAYAHISENRASREILRFLISEGARFPDLVDRHYEEFVEPMMQHFKKVIDAGVAAGEFRDAPA TEFVEIVMSPALLISLWSLLFGTRKRFDMDSFTEASTDLLLRGLIR >Mature_205_residues PPEAKKRARRKAERPAEILDAAFEEFVKHGYSATRLEDVAALAGVTKGTIYFYFDTKERVFEEMVRHKSMEFLPRLGDYA ATLTGSHTDRLRAMVVFAYAHISENRASREILRFLISEGARFPDLVDRHYEEFVEPMMQHFKKVIDAGVAAGEFRDAPAT EFVEIVMSPALLISLWSLLFGTRKRFDMDSFTEASTDLLLRGLIR
Specific function: Potential Regulator Protein For The Acref/Envcd Genes. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23602; Mature: 23471
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPEAKKRARRKAERPAEILDAAFEEFVKHGYSATRLEDVAALAGVTKGTIYFYFDTKER CCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCHHH VFEEMVRHKSMEFLPRLGDYAATLTGSHTDRLRAMVVFAYAHISENRASREILRFLISEG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ARFPDLVDRHYEEFVEPMMQHFKKVIDAGVAAGEFRDAPATEFVEIVMSPALLISLWSLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FGTRKRFDMDSFTEASTDLLLRGLIR HHHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure PPEAKKRARRKAERPAEILDAAFEEFVKHGYSATRLEDVAALAGVTKGTIYFYFDTKER CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCHHH VFEEMVRHKSMEFLPRLGDYAATLTGSHTDRLRAMVVFAYAHISENRASREILRFLISEG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ARFPDLVDRHYEEFVEPMMQHFKKVIDAGVAAGEFRDAPATEFVEIVMSPALLISLWSLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FGTRKRFDMDSFTEASTDLLLRGLIR HHHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA