| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is rhlE [H]
Identifier: 86750102
GI number: 86750102
Start: 3399339
End: 3400889
Strand: Direct
Name: rhlE [H]
Synonym: RPB_2985
Alternate gene names: 86750102
Gene position: 3399339-3400889 (Clockwise)
Preceding gene: 86750101
Following gene: 86750103
Centisome position: 63.76
GC content: 70.34
Gene sequence:
>1551_bases ATGTCCTTCAACAATCTCGGCCTTTCAGACAAGGTCCTCGCCGCTGTCGCAGCCAGCGGCTACACGACGCCCACCCCGAT CCAGGAACAGGCGATCCCCCACGTGCTCGCCCGGCGAGACGTCCTCGGCATCGCCCAGACCGGCACCGGCAAGACCGCGG CGTTCGTGCTGCCGATGCTGACGATGCTGGAAAAGGGCCGCGCCCGCGCGCGGATGCCGCGCACCCTGATCCTCGAGCCG ACCCGCGAGCTCGCCGCCCAGGTCAAGGAACAGTTCGACAAATACGGCGCCGGCCAGAAGCTCAACGTCGCTTTGCTGAT CGGCGGCGTCTCGTTCGGTGATCAGGACCTCAAACTCACCCGCGGCGTCGACGTGCTGATCGCCACCCCGGGCCGCCTGC TCGACCACACCGAACGCGGCGGCCTGCTGCTCACCGGCGTCGAGATGCTGATCATCGACGAAGCCGACCGGATGCTCGAC ATGGGCTTCATTCCGGACATCGAGCGGGTCTGCAAGCTGGTGCCGTTCACCCGCCAGACGCTGTTCTTCACCGCGACGAT GCCGCCGGAAATCCGCCGCGTCACCGAGACCTTCCTGCACAATCCCGAGAAGATCGAAGTCTCCAAGCCGGCTTCCACCG CCGTGACGGTGGCGCAGTCGCAGGTGGCCTGCGGTCGCGAGCCGCACGAGAAGCGCGAGACCTTGCGCAGCCTGATCCGC GCCGCCACCGACCTGCAGAACGCGATCATCTTCTGCAACCGCAAGCGCGAAGTGGCGTTGCTGGCGAAATCGCTGCAGAA GCACGGCTTCAGCGTCGGCGCGCTACACGGCGACATGGACCAGAGCGCCCGCACCGCGGCGCTGGATCAATTCCGCAAGG GCGAATTGCCGATCCTGGTGGCCTCGGACGTCGCCGCGCGCGGCCTCGACATTCCGGAAGTCAGCCACGTCTTCAATTTC GACGTGCCGCATCATCCCGACGACTACGTCCATCGCGTCGGCCGCACCGGCCGCGCCGGACGGCTCGGCACCGCGATCTC GATCGTCGCGCCGTCCGACCAGAAATCGATCGCCGCGATCGAGAAGCTGATCGGCAAGGAAATCCCCCGCGTCGACGCCG GCCCGGTCGGCGAAGCCGACCGCGAGCAGGCCGAAGACACCGACCGGCCCGCGCGGTCGTCGCGGCGCTCGTCCGAATCG CGCAGCCGCGAAGTGCGGGGCGAAGACCGCCCGGCCCGCGAGTCGCGTGGCCCGCGGCGCGAACCGCGCGGCGAGGGACG TGGCGAAGCGCGCCCTGCGCGTGAGCCGCGGGAGGCCCGCGCACCGGTCGAGGCCCGTGAGGCGCCCCGTGAGGTTCGCG AGCCGCGTGAACCGCGCGAGGCCCGCAAGCCGCGCCGCGAACCGCGCAACGCGCCGGCGGCGCCCGCCGCCGCGCCGGCT GCCCATGCCTCGTTCGGGTCGGCGCCGCCGGCACGCGACCTGTCGTCCGAGCCGGGCGACCATTCGCATCTGCCCGCCTT CCTGCTGCGTCCTGTGCGCGCACGGGGCTGA
Upstream 100 bases:
>100_bases CAGCCTATTTCCAGATTCAAGGCGGCGGTTTCGACCAATGGCGTGATCCCGAACTCCGAAATTTCGGTCCGGGTCAGGTT GCGCCGACAACAGAGGCTCA
Downstream 100 bases:
>100_bases CGCGCGGTCGTTTGACCCGGGACATTTACCCGGCATTCACCCTCGCAACGTAGCCTTGCAACCGTTGATGCAGGGTTGGG GGCAGTCCCCCCACGACGGG
Product: DEAD/DEAH box helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MSFNNLGLSDKVLAAVAASGYTTPTPIQEQAIPHVLARRDVLGIAQTGTGKTAAFVLPMLTMLEKGRARARMPRTLILEP TRELAAQVKEQFDKYGAGQKLNVALLIGGVSFGDQDLKLTRGVDVLIATPGRLLDHTERGGLLLTGVEMLIIDEADRMLD MGFIPDIERVCKLVPFTRQTLFFTATMPPEIRRVTETFLHNPEKIEVSKPASTAVTVAQSQVACGREPHEKRETLRSLIR AATDLQNAIIFCNRKREVALLAKSLQKHGFSVGALHGDMDQSARTAALDQFRKGELPILVASDVAARGLDIPEVSHVFNF DVPHHPDDYVHRVGRTGRAGRLGTAISIVAPSDQKSIAAIEKLIGKEIPRVDAGPVGEADREQAEDTDRPARSSRRSSES RSREVRGEDRPARESRGPRREPRGEGRGEARPAREPREARAPVEAREAPREVREPREPREARKPRREPRNAPAAPAAAPA AHASFGSAPPARDLSSEPGDHSHLPAFLLRPVRARG
Sequences:
>Translated_516_residues MSFNNLGLSDKVLAAVAASGYTTPTPIQEQAIPHVLARRDVLGIAQTGTGKTAAFVLPMLTMLEKGRARARMPRTLILEP TRELAAQVKEQFDKYGAGQKLNVALLIGGVSFGDQDLKLTRGVDVLIATPGRLLDHTERGGLLLTGVEMLIIDEADRMLD MGFIPDIERVCKLVPFTRQTLFFTATMPPEIRRVTETFLHNPEKIEVSKPASTAVTVAQSQVACGREPHEKRETLRSLIR AATDLQNAIIFCNRKREVALLAKSLQKHGFSVGALHGDMDQSARTAALDQFRKGELPILVASDVAARGLDIPEVSHVFNF DVPHHPDDYVHRVGRTGRAGRLGTAISIVAPSDQKSIAAIEKLIGKEIPRVDAGPVGEADREQAEDTDRPARSSRRSSES RSREVRGEDRPARESRGPRREPRGEGRGEARPAREPREARAPVEAREAPREVREPREPREARKPRREPRNAPAAPAAAPA AHASFGSAPPARDLSSEPGDHSHLPAFLLRPVRARG >Mature_515_residues SFNNLGLSDKVLAAVAASGYTTPTPIQEQAIPHVLARRDVLGIAQTGTGKTAAFVLPMLTMLEKGRARARMPRTLILEPT RELAAQVKEQFDKYGAGQKLNVALLIGGVSFGDQDLKLTRGVDVLIATPGRLLDHTERGGLLLTGVEMLIIDEADRMLDM GFIPDIERVCKLVPFTRQTLFFTATMPPEIRRVTETFLHNPEKIEVSKPASTAVTVAQSQVACGREPHEKRETLRSLIRA ATDLQNAIIFCNRKREVALLAKSLQKHGFSVGALHGDMDQSARTAALDQFRKGELPILVASDVAARGLDIPEVSHVFNFD VPHHPDDYVHRVGRTGRAGRLGTAISIVAPSDQKSIAAIEKLIGKEIPRVDAGPVGEADREQAEDTDRPARSSRRSSESR SREVRGEDRPARESRGPRREPRGEGRGEARPAREPREARAPVEAREAPREVREPREPREARKPRREPRNAPAAPAAAPAA HASFGSAPPARDLSSEPGDHSHLPAFLLRPVRARG
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI20149629, Length=444, Percent_Identity=38.0630630630631, Blast_Score=281, Evalue=1e-75, Organism=Homo sapiens, GI41327771, Length=395, Percent_Identity=36.9620253164557, Blast_Score=268, Evalue=7e-72, Organism=Homo sapiens, GI301171467, Length=382, Percent_Identity=39.2670157068063, Blast_Score=267, Evalue=1e-71, Organism=Homo sapiens, GI87196351, Length=382, Percent_Identity=39.2670157068063, Blast_Score=267, Evalue=2e-71, Organism=Homo sapiens, GI301171475, Length=382, Percent_Identity=39.2670157068063, Blast_Score=267, Evalue=2e-71, Organism=Homo sapiens, GI169881239, Length=382, Percent_Identity=38.4816753926702, Blast_Score=264, Evalue=2e-70, Organism=Homo sapiens, GI13514809, Length=382, Percent_Identity=38.4816753926702, Blast_Score=264, Evalue=2e-70, Organism=Homo sapiens, GI148613856, Length=371, Percent_Identity=38.0053908355795, Blast_Score=258, Evalue=1e-68, Organism=Homo sapiens, GI38201710, Length=371, Percent_Identity=38.0053908355795, Blast_Score=258, Evalue=1e-68, Organism=Homo sapiens, GI7661920, Length=379, Percent_Identity=37.2031662269129, Blast_Score=256, Evalue=2e-68, Organism=Homo sapiens, GI45446747, Length=354, Percent_Identity=38.135593220339, Blast_Score=256, Evalue=3e-68, Organism=Homo sapiens, GI45446743, Length=354, Percent_Identity=38.135593220339, Blast_Score=256, Evalue=3e-68, Organism=Homo sapiens, GI13518015, Length=360, Percent_Identity=39.4444444444444, Blast_Score=254, Evalue=1e-67, Organism=Homo sapiens, GI216548263, Length=360, Percent_Identity=39.4444444444444, Blast_Score=254, Evalue=1e-67, Organism=Homo sapiens, GI262231852, Length=360, Percent_Identity=39.4444444444444, Blast_Score=254, Evalue=2e-67, Organism=Homo sapiens, GI262118318, Length=360, Percent_Identity=39.4444444444444, Blast_Score=254, Evalue=2e-67, Organism=Homo sapiens, GI222352149, Length=382, Percent_Identity=35.8638743455497, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI4758138, Length=367, Percent_Identity=35.6948228882834, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI224593278, Length=363, Percent_Identity=38.2920110192837, Blast_Score=243, Evalue=4e-64, Organism=Homo sapiens, GI41327776, Length=441, Percent_Identity=35.6009070294785, Blast_Score=241, Evalue=9e-64, Organism=Homo sapiens, GI50659095, Length=384, Percent_Identity=35.6770833333333, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI31542656, Length=373, Percent_Identity=39.9463806970509, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI55749865, Length=398, Percent_Identity=32.9145728643216, Blast_Score=232, Evalue=8e-61, Organism=Homo sapiens, GI41327773, Length=353, Percent_Identity=35.4107648725212, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI21071032, Length=367, Percent_Identity=36.5122615803815, Blast_Score=228, Evalue=8e-60, Organism=Homo sapiens, GI13514831, Length=377, Percent_Identity=36.3395225464191, Blast_Score=228, Evalue=2e-59, Organism=Homo sapiens, GI164664518, Length=369, Percent_Identity=33.8753387533875, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI13129006, Length=384, Percent_Identity=34.375, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI188035877, Length=364, Percent_Identity=34.6153846153846, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI164419743, Length=366, Percent_Identity=34.4262295081967, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI51094101, Length=366, Percent_Identity=34.4262295081967, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI4503529, Length=380, Percent_Identity=34.2105263157895, Blast_Score=205, Evalue=9e-53, Organism=Homo sapiens, GI83700235, Length=380, Percent_Identity=34.2105263157895, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI38327634, Length=362, Percent_Identity=35.9116022099448, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI6005743, Length=398, Percent_Identity=33.9195979899498, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI8922886, Length=398, Percent_Identity=34.1708542713568, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI62241022, Length=380, Percent_Identity=33.6842105263158, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI164419732, Length=383, Percent_Identity=31.5926892950392, Blast_Score=182, Evalue=7e-46, Organism=Homo sapiens, GI4758112, Length=358, Percent_Identity=30.7262569832402, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI18375623, Length=358, Percent_Identity=30.7262569832402, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI21040371, Length=359, Percent_Identity=30.9192200557103, Blast_Score=179, Evalue=7e-45, Organism=Homo sapiens, GI17505907, Length=421, Percent_Identity=30.4038004750594, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI62241024, Length=359, Percent_Identity=33.1476323119777, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI9506931, Length=453, Percent_Identity=29.1390728476821, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI41327779, Length=387, Percent_Identity=31.5245478036176, Blast_Score=174, Evalue=3e-43, Organism=Homo sapiens, GI38569505, Length=382, Percent_Identity=29.5811518324607, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI38569503, Length=382, Percent_Identity=29.5811518324607, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI4826686, Length=339, Percent_Identity=32.4483775811209, Blast_Score=155, Evalue=9e-38, Organism=Homo sapiens, GI256223453, Length=363, Percent_Identity=27.8236914600551, Blast_Score=153, Evalue=4e-37, Organism=Homo sapiens, GI9966805, Length=324, Percent_Identity=30.2469135802469, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI256773275, Length=403, Percent_Identity=31.2655086848635, Blast_Score=139, Evalue=9e-33, Organism=Homo sapiens, GI154759257, Length=402, Percent_Identity=27.363184079602, Blast_Score=132, Evalue=8e-31, Organism=Homo sapiens, GI20336298, Length=215, Percent_Identity=33.953488372093, Blast_Score=115, Evalue=7e-26, Organism=Homo sapiens, GI284005309, Length=399, Percent_Identity=24.812030075188, Blast_Score=71, Evalue=3e-12, Organism=Escherichia coli, GI1787016, Length=374, Percent_Identity=48.3957219251337, Blast_Score=330, Evalue=1e-91, Organism=Escherichia coli, GI87082221, Length=374, Percent_Identity=42.5133689839572, Blast_Score=290, Evalue=1e-79, Organism=Escherichia coli, GI1790214, Length=379, Percent_Identity=39.8416886543536, Blast_Score=253, Evalue=3e-68, Organism=Escherichia coli, GI1788930, Length=352, Percent_Identity=41.1931818181818, Blast_Score=236, Evalue=3e-63, Organism=Escherichia coli, GI1787605, Length=351, Percent_Identity=38.4615384615385, Blast_Score=216, Evalue=3e-57, Organism=Escherichia coli, GI48994977, Length=352, Percent_Identity=25.8522727272727, Blast_Score=85, Evalue=1e-17, Organism=Caenorhabditis elegans, GI32565321, Length=385, Percent_Identity=40.5194805194805, Blast_Score=271, Evalue=6e-73, Organism=Caenorhabditis elegans, GI17555296, Length=369, Percent_Identity=38.7533875338753, Blast_Score=263, Evalue=1e-70, Organism=Caenorhabditis elegans, GI71995718, Length=398, Percent_Identity=38.4422110552764, Blast_Score=263, Evalue=2e-70, Organism=Caenorhabditis elegans, GI17510309, Length=388, Percent_Identity=39.6907216494845, Blast_Score=258, Evalue=4e-69, Organism=Caenorhabditis elegans, GI17510307, Length=388, Percent_Identity=39.6907216494845, Blast_Score=258, Evalue=5e-69, Organism=Caenorhabditis elegans, GI71995514, Length=387, Percent_Identity=39.5348837209302, Blast_Score=258, Evalue=7e-69, Organism=Caenorhabditis elegans, GI71995724, Length=379, Percent_Identity=36.9393139841689, Blast_Score=256, Evalue=2e-68, Organism=Caenorhabditis elegans, GI17507121, Length=379, Percent_Identity=36.6754617414248, Blast_Score=256, Evalue=2e-68, Organism=Caenorhabditis elegans, GI86570094, Length=367, Percent_Identity=37.3297002724796, Blast_Score=248, Evalue=7e-66, Organism=Caenorhabditis elegans, GI115533224, Length=348, Percent_Identity=38.2183908045977, Blast_Score=244, Evalue=1e-64, Organism=Caenorhabditis elegans, GI17510559, Length=387, Percent_Identity=36.4341085271318, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI71987143, Length=367, Percent_Identity=35.149863760218, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI17507945, Length=372, Percent_Identity=38.7096774193548, Blast_Score=231, Evalue=7e-61, Organism=Caenorhabditis elegans, GI17552642, Length=375, Percent_Identity=36.2666666666667, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI17537549, Length=387, Percent_Identity=34.8837209302326, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI71999644, Length=368, Percent_Identity=35.5978260869565, Blast_Score=220, Evalue=2e-57, Organism=Caenorhabditis elegans, GI71999646, Length=368, Percent_Identity=35.5978260869565, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17507877, Length=387, Percent_Identity=33.8501291989664, Blast_Score=218, Evalue=5e-57, Organism=Caenorhabditis elegans, GI17552114, Length=362, Percent_Identity=32.3204419889503, Blast_Score=218, Evalue=9e-57, Organism=Caenorhabditis elegans, GI17507881, Length=420, Percent_Identity=32.1428571428571, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI115532548, Length=383, Percent_Identity=34.7258485639687, Blast_Score=216, Evalue=3e-56, Organism=Caenorhabditis elegans, GI115532546, Length=376, Percent_Identity=35.1063829787234, Blast_Score=211, Evalue=6e-55, Organism=Caenorhabditis elegans, GI17509811, Length=375, Percent_Identity=33.3333333333333, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17507879, Length=372, Percent_Identity=33.3333333333333, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI17505370, Length=346, Percent_Identity=35.8381502890173, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI71982858, Length=365, Percent_Identity=31.5068493150685, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17508543, Length=390, Percent_Identity=30.2564102564103, Blast_Score=176, Evalue=3e-44, Organism=Caenorhabditis elegans, GI193208216, Length=411, Percent_Identity=32.8467153284672, Blast_Score=174, Evalue=8e-44, Organism=Caenorhabditis elegans, GI17556951, Length=405, Percent_Identity=29.8765432098765, Blast_Score=169, Evalue=4e-42, Organism=Caenorhabditis elegans, GI193206561, Length=351, Percent_Identity=31.3390313390313, Blast_Score=169, Evalue=5e-42, Organism=Caenorhabditis elegans, GI25148203, Length=414, Percent_Identity=26.5700483091787, Blast_Score=162, Evalue=5e-40, Organism=Caenorhabditis elegans, GI17536099, Length=401, Percent_Identity=30.1745635910224, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17536101, Length=401, Percent_Identity=30.1745635910224, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17536103, Length=399, Percent_Identity=29.3233082706767, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI71990816, Length=382, Percent_Identity=31.151832460733, Blast_Score=157, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17507641, Length=388, Percent_Identity=29.3814432989691, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI32564046, Length=375, Percent_Identity=29.0666666666667, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17553716, Length=355, Percent_Identity=28.7323943661972, Blast_Score=145, Evalue=5e-35, Organism=Caenorhabditis elegans, GI25148291, Length=394, Percent_Identity=25.8883248730964, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI25148205, Length=340, Percent_Identity=26.1764705882353, Blast_Score=123, Evalue=3e-28, Organism=Caenorhabditis elegans, GI71997889, Length=377, Percent_Identity=27.5862068965517, Blast_Score=115, Evalue=5e-26, Organism=Caenorhabditis elegans, GI71982862, Length=226, Percent_Identity=30.0884955752212, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI71987152, Length=104, Percent_Identity=40.3846153846154, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71987997, Length=347, Percent_Identity=23.342939481268, Blast_Score=65, Evalue=8e-11, Organism=Caenorhabditis elegans, GI71987993, Length=347, Percent_Identity=23.342939481268, Blast_Score=65, Evalue=1e-10, Organism=Saccharomyces cerevisiae, GI6321856, Length=428, Percent_Identity=38.3177570093458, Blast_Score=270, Evalue=5e-73, Organism=Saccharomyces cerevisiae, GI6324217, Length=360, Percent_Identity=39.7222222222222, Blast_Score=262, Evalue=8e-71, Organism=Saccharomyces cerevisiae, GI6324778, Length=381, Percent_Identity=38.0577427821522, Blast_Score=255, Evalue=1e-68, Organism=Saccharomyces cerevisiae, GI6325138, Length=381, Percent_Identity=38.0577427821522, Blast_Score=251, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6321360, Length=354, Percent_Identity=39.2655367231638, Blast_Score=251, Evalue=3e-67, Organism=Saccharomyces cerevisiae, GI6323021, Length=359, Percent_Identity=37.883008356546, Blast_Score=244, Evalue=3e-65, Organism=Saccharomyces cerevisiae, GI6320041, Length=372, Percent_Identity=36.0215053763441, Blast_Score=241, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6320224, Length=370, Percent_Identity=34.3243243243243, Blast_Score=234, Evalue=4e-62, Organism=Saccharomyces cerevisiae, GI6320173, Length=419, Percent_Identity=34.3675417661098, Blast_Score=225, Evalue=1e-59, Organism=Saccharomyces cerevisiae, GI6320449, Length=372, Percent_Identity=37.0967741935484, Blast_Score=224, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6321963, Length=388, Percent_Identity=36.340206185567, Blast_Score=218, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6322912, Length=366, Percent_Identity=35.5191256830601, Blast_Score=209, Evalue=6e-55, Organism=Saccharomyces cerevisiae, GI6322323, Length=366, Percent_Identity=35.5191256830601, Blast_Score=209, Evalue=6e-55, Organism=Saccharomyces cerevisiae, GI6323947, Length=364, Percent_Identity=36.5384615384615, Blast_Score=204, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6322427, Length=368, Percent_Identity=34.2391304347826, Blast_Score=201, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6324620, Length=391, Percent_Identity=33.2480818414322, Blast_Score=198, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6319714, Length=374, Percent_Identity=32.8877005347594, Blast_Score=195, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6321111, Length=377, Percent_Identity=32.6259946949602, Blast_Score=175, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6319618, Length=426, Percent_Identity=30.7511737089202, Blast_Score=167, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6320119, Length=365, Percent_Identity=30.4109589041096, Blast_Score=164, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6321267, Length=405, Percent_Identity=30.1234567901235, Blast_Score=160, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6320400, Length=373, Percent_Identity=29.2225201072386, Blast_Score=155, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6323306, Length=412, Percent_Identity=25.7281553398058, Blast_Score=139, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6322876, Length=463, Percent_Identity=25.4859611231102, Blast_Score=132, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6324366, Length=401, Percent_Identity=27.930174563591, Blast_Score=120, Evalue=5e-28, Organism=Saccharomyces cerevisiae, GI6321374, Length=424, Percent_Identity=25, Blast_Score=103, Evalue=5e-23, Organism=Drosophila melanogaster, GI24584994, Length=386, Percent_Identity=38.0829015544041, Blast_Score=270, Evalue=3e-72, Organism=Drosophila melanogaster, GI24585582, Length=369, Percent_Identity=38.4823848238482, Blast_Score=267, Evalue=2e-71, Organism=Drosophila melanogaster, GI24584399, Length=366, Percent_Identity=40.1639344262295, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI28574962, Length=361, Percent_Identity=38.781163434903, Blast_Score=261, Evalue=1e-69, Organism=Drosophila melanogaster, GI17985987, Length=393, Percent_Identity=39.1857506361323, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI24662330, Length=356, Percent_Identity=38.7640449438202, Blast_Score=256, Evalue=2e-68, Organism=Drosophila melanogaster, GI21355075, Length=364, Percent_Identity=38.1868131868132, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24644479, Length=365, Percent_Identity=37.5342465753425, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24644483, Length=365, Percent_Identity=37.5342465753425, Blast_Score=253, Evalue=3e-67, Organism=Drosophila melanogaster, GI281361218, Length=365, Percent_Identity=37.5342465753425, Blast_Score=252, Evalue=4e-67, Organism=Drosophila melanogaster, GI24644481, Length=365, Percent_Identity=37.5342465753425, Blast_Score=252, Evalue=4e-67, Organism=Drosophila melanogaster, GI24644487, Length=365, Percent_Identity=37.5342465753425, Blast_Score=252, Evalue=4e-67, Organism=Drosophila melanogaster, GI45551833, Length=365, Percent_Identity=37.5342465753425, Blast_Score=252, Evalue=4e-67, Organism=Drosophila melanogaster, GI24644485, Length=365, Percent_Identity=37.5342465753425, Blast_Score=252, Evalue=4e-67, Organism=Drosophila melanogaster, GI24645031, Length=379, Percent_Identity=36.4116094986807, Blast_Score=248, Evalue=6e-66, Organism=Drosophila melanogaster, GI17977678, Length=367, Percent_Identity=37.0572207084469, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI21356161, Length=363, Percent_Identity=36.9146005509642, Blast_Score=236, Evalue=3e-62, Organism=Drosophila melanogaster, GI18857967, Length=367, Percent_Identity=36.7847411444142, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24642151, Length=359, Percent_Identity=34.5403899721448, Blast_Score=229, Evalue=4e-60, Organism=Drosophila melanogaster, GI28575014, Length=376, Percent_Identity=32.9787234042553, Blast_Score=221, Evalue=7e-58, Organism=Drosophila melanogaster, GI17136814, Length=372, Percent_Identity=37.6344086021505, Blast_Score=218, Evalue=7e-57, Organism=Drosophila melanogaster, GI24582080, Length=367, Percent_Identity=35.149863760218, Blast_Score=216, Evalue=3e-56, Organism=Drosophila melanogaster, GI24582078, Length=367, Percent_Identity=35.149863760218, Blast_Score=216, Evalue=3e-56, Organism=Drosophila melanogaster, GI17136248, Length=367, Percent_Identity=35.149863760218, Blast_Score=216, Evalue=3e-56, Organism=Drosophila melanogaster, GI24582075, Length=367, Percent_Identity=35.149863760218, Blast_Score=216, Evalue=3e-56, Organism=Drosophila melanogaster, GI24583281, Length=407, Percent_Identity=30.7125307125307, Blast_Score=213, Evalue=3e-55, Organism=Drosophila melanogaster, GI24583279, Length=407, Percent_Identity=30.7125307125307, Blast_Score=212, Evalue=6e-55, Organism=Drosophila melanogaster, GI281365720, Length=317, Percent_Identity=37.8548895899054, Blast_Score=211, Evalue=7e-55, Organism=Drosophila melanogaster, GI28571808, Length=363, Percent_Identity=34.1597796143251, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI28571809, Length=363, Percent_Identity=34.1597796143251, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI21355559, Length=395, Percent_Identity=33.6708860759494, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI24642822, Length=400, Percent_Identity=32.75, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI24581954, Length=358, Percent_Identity=29.608938547486, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI24581952, Length=358, Percent_Identity=29.608938547486, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI24581956, Length=358, Percent_Identity=29.608938547486, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI24643725, Length=454, Percent_Identity=28.6343612334802, Blast_Score=166, Evalue=3e-41, Organism=Drosophila melanogaster, GI24666101, Length=378, Percent_Identity=31.7460317460317, Blast_Score=155, Evalue=6e-38, Organism=Drosophila melanogaster, GI19920478, Length=378, Percent_Identity=30.6878306878307, Blast_Score=153, Evalue=3e-37, Organism=Drosophila melanogaster, GI24668515, Length=334, Percent_Identity=30.8383233532934, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI17647335, Length=356, Percent_Identity=29.2134831460674, Blast_Score=145, Evalue=6e-35, Organism=Drosophila melanogaster, GI20130173, Length=325, Percent_Identity=29.5384615384615, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI24640164, Length=388, Percent_Identity=24.7422680412371, Blast_Score=115, Evalue=8e-26, Organism=Drosophila melanogaster, GI18859659, Length=206, Percent_Identity=33.495145631068, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI28571338, Length=206, Percent_Identity=33.495145631068, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI17136666, Length=156, Percent_Identity=33.974358974359, Blast_Score=82, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 56397; Mature: 56266
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFNNLGLSDKVLAAVAASGYTTPTPIQEQAIPHVLARRDVLGIAQTGTGKTAAFVLPML CCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHH TMLEKGRARARMPRTLILEPTRELAAQVKEQFDKYGAGQKLNVALLIGGVSFGDQDLKLT HHHHHCHHHHHCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCEEE RGVDVLIATPGRLLDHTERGGLLLTGVEMLIIDEADRMLDMGFIPDIERVCKLVPFTRQT CCCEEEEECCCHHHCCCCCCCEEEECCEEEEECCHHHHHHCCCCCCHHHHHHHCCCCCCE LFFTATMPPEIRRVTETFLHNPEKIEVSKPASTAVTVAQSQVACGREPHEKRETLRSLIR EEEEECCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH AATDLQNAIIFCNRKREVALLAKSLQKHGFSVGALHGDMDQSARTAALDQFRKGELPILV HHHHHHHEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEE ASDVAARGLDIPEVSHVFNFDVPHHPDDYVHRVGRTGRAGRLGTAISIVAPSDQKSIAAI ECCHHHCCCCCCCHHHHEECCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHH EKLIGKEIPRVDAGPVGEADREQAEDTDRPARSSRRSSESRSREVRGEDRPARESRGPRR HHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCC EPRGEGRGEARPAREPREARAPVEAREAPREVREPREPREARKPRREPRNAPAAPAAAPA CCCCCCCCCCCCCCCCHHHCCCCHHHHCCHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCH AHASFGSAPPARDLSSEPGDHSHLPAFLLRPVRARG HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure SFNNLGLSDKVLAAVAASGYTTPTPIQEQAIPHVLARRDVLGIAQTGTGKTAAFVLPML CCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHH TMLEKGRARARMPRTLILEPTRELAAQVKEQFDKYGAGQKLNVALLIGGVSFGDQDLKLT HHHHHCHHHHHCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCEEE RGVDVLIATPGRLLDHTERGGLLLTGVEMLIIDEADRMLDMGFIPDIERVCKLVPFTRQT CCCEEEEECCCHHHCCCCCCCEEEECCEEEEECCHHHHHHCCCCCCHHHHHHHCCCCCCE LFFTATMPPEIRRVTETFLHNPEKIEVSKPASTAVTVAQSQVACGREPHEKRETLRSLIR EEEEECCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH AATDLQNAIIFCNRKREVALLAKSLQKHGFSVGALHGDMDQSARTAALDQFRKGELPILV HHHHHHHEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEE ASDVAARGLDIPEVSHVFNFDVPHHPDDYVHRVGRTGRAGRLGTAISIVAPSDQKSIAAI ECCHHHCCCCCCCHHHHEECCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHH EKLIGKEIPRVDAGPVGEADREQAEDTDRPARSSRRSSESRSREVRGEDRPARESRGPRR HHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCC EPRGEGRGEARPAREPREARAPVEAREAPREVREPREPREARKPRREPRNAPAAPAAAPA CCCCCCCCCCCCCCCCHHHCCCCHHHHCCHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCH AHASFGSAPPARDLSSEPGDHSHLPAFLLRPVRARG HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]