| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is ppk [H]
Identifier: 86749612
GI number: 86749612
Start: 2849821
End: 2852022
Strand: Direct
Name: ppk [H]
Synonym: RPB_2492
Alternate gene names: 86749612
Gene position: 2849821-2852022 (Clockwise)
Preceding gene: 86749611
Following gene: 86749613
Centisome position: 53.45
GC content: 62.99
Gene sequence:
>2202_bases ATGGACTCCGACCAAATCATTGTCATCGAAGAGAAAAATGGTGAAGCCGAGCCGGCGTCCGTGGTTGCCGCCGGGCCGGA ACGCTTCATCAACCGCGAATTGTCGTGGCTGCATTTCAATCGGCGGGTGCTCGAGGAGGCGGTCAATCCCTCCCATCCGG TACTCGAGCGCGTCCGTTTTTTGTCGATTTCGGCCAACAACCTCGACGAATTCTTCATGGTGCGAGTCGCCGGCATCAAG GCGCAGGTCCGGGAAGGCATTACCGAGCGCAGCCCGGACGGGCTGACGCCGGCCGAGCAATTGGTGCTGATCAACGAGGC GGTCTCGCGCCTGGCGAGCGACCAGCAGGCGATCTGGCGTGACCTGCGCGGGATTCTGACCGAGGCCGGCATCGTGCTGC TCGACGGCCGCGACGCCACCAAGTCGCAGCGGGCGTGGATCGAGGATCATTTTCTCCACAACATTTTTCCGCTGCTGACC CCGCTGGCGATCGATCCGGCGCATCCGTTTCCCTTCATCCCGAGCCTCGGTTTCACCATCGGCCTGCAACTCGCGCGGGT GTCGGACGGCAAGTCGATGAACGCGCTGATCCGCATGCCGGGCAAAATCGACCGCTTCATTCGGCTGCCGCCGAACGGCA AGGACCAGTCCGTCCGGCTGATGACGCTGGAGCAGGCGACGTCGCTGTTCATCGGGAGGTTGTTTCCGGGATATGTCGTG AAGGGGCAGGGCTCCTTCCGGGTCATTCGCGACAGCGAACTCGAAATCGAGGAAGAGGCCGAAGATCTGGTCCGGCTGTT CGAGACCGCGCTGAAGCGGCGGCGGCGGGGGTCGGTGATCCGGCTCGAAGTCGATTCGACGATGCCGGAAGAATTGCGTG CCTTCGTGCAGCGCGCGCTGTCGACCGCCGACGACGAAGTGCTGCTCGTCGACGGCGTGCTGGCGATGAACGAACTGTCG CAACTGACACGGGTCGATCGCCCCGACCTCGAATTTCCACCGTACGTGCCGCGCCATCCGGAGCGTGTGCGCGACCATGG CGGCGACATCTTCGCGGCGATCCGCAAGAAGGATCTGATCGTCCATCATCCCTACGAGTCGTTCGACGTGGTGGTGCAGT TCCTGCAACAGGCGACCCGCGATCCGGATGTCGTTGCGATCAAGCAGACGCTGTACCGGACCTCGAACAACTCGCCGATC GTCCGGGCGTTGGCGGAAGCCGCGGAGGCCGGCAAGTCGGTCACGGCGCTGGTGGAACTGAAGGCGCGGTTCGATGAGGA GGCCAATATCCGCTGGGCGCGCGACCTCGAACGCGCTGGTGTCCAAGTGGTCTACGGCTTCCTGGAGCTCAAGACCCACG CCAAGCTGTCGCTGGTGGTGCGTCGCGAAGGCAATACCCTGACCACCTATGTCCATACCGGGACAGGGAACTATCACCCG GTCACCGCGCGAATCTATACCGACCTGTCGTATTTCACCTCCGATCCGATCATCGGCCGCGACGCGGCACGGGTCTTCAA CTACATCACCGGCTATGCCGAGCCGAGCGACATCGAAAAAATGGCGGTGTCGCCGCTCACGCTGCGCAAGCGCATGCTCG AACACATCCGAGGCGAGACGGCTTTCGCGCGCCACGGCAAGCCGGCGGCGATCTGGCTGAAGATGAACTCGCTGGTCGAT CCGGACATCATCGACGCGCTGTACGAGGCGTCGCGCGCCGGCGTCTCGGTCGAACTCGTGGTTCGCGGCATCTGCTGCCT GCGGCCCGGTGTGCCGGGCCTGTCCGAGAACATCCGTGTCAAATCGATCATCGGCCGGTTCCTGGAGCACGGCCGCGTCT ATTGCTTTGGAAACGGCCACGGCCTGCCCAGCGCCAAAGCGGCGGTTTACATCTCGTCGGCCGATATGATGCCGCGCAAC CTCGATCGGCGCGTGGAGATCCTTTGCCCGCTGCTCAACCCGACCGTGCATCAGCAGGTGCTGGAGCAGATCATGGTCGC GAACCTGAAGGATACCGAGCAGAGCTGGCAGTTGTTGCCGGATGGGTCATCGACGCGTATGAAGGCGGCGAAGGGTGAAG AACCCTTCAACGTGCACAACTACTTCATGACCAATCCGAGTCTGTCCGGCCGTGGAAAGTCGCTCAAAGAATCTTCGCCG CGACGACTCACGCGCCGTTCGGAGCGCCATCAGTCGCCTTGA
Upstream 100 bases:
>100_bases AGTCCCTCAATGTCATGGAAACGTCTTGCGTGTGCAGCATTGTCTCGCCGCACCGCCACCTCCGGCACGACGACCCCGCA TCGCACTGGACCGACCTCTC
Downstream 100 bases:
>100_bases GGATTTTGCACGGTGACGAAGCGGGCGCGCAGGCGCGAAACCAGCGTCGCAGTGATCGACATAGGCTCGAATTCCGTGCG TCTCGTGGTCTACGAGTCGC
Product: polyphosphate kinase
Products: NA
Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]
Number of amino acids: Translated: 733; Mature: 733
Protein sequence:
>733_residues MDSDQIIVIEEKNGEAEPASVVAAGPERFINRELSWLHFNRRVLEEAVNPSHPVLERVRFLSISANNLDEFFMVRVAGIK AQVREGITERSPDGLTPAEQLVLINEAVSRLASDQQAIWRDLRGILTEAGIVLLDGRDATKSQRAWIEDHFLHNIFPLLT PLAIDPAHPFPFIPSLGFTIGLQLARVSDGKSMNALIRMPGKIDRFIRLPPNGKDQSVRLMTLEQATSLFIGRLFPGYVV KGQGSFRVIRDSELEIEEEAEDLVRLFETALKRRRRGSVIRLEVDSTMPEELRAFVQRALSTADDEVLLVDGVLAMNELS QLTRVDRPDLEFPPYVPRHPERVRDHGGDIFAAIRKKDLIVHHPYESFDVVVQFLQQATRDPDVVAIKQTLYRTSNNSPI VRALAEAAEAGKSVTALVELKARFDEEANIRWARDLERAGVQVVYGFLELKTHAKLSLVVRREGNTLTTYVHTGTGNYHP VTARIYTDLSYFTSDPIIGRDAARVFNYITGYAEPSDIEKMAVSPLTLRKRMLEHIRGETAFARHGKPAAIWLKMNSLVD PDIIDALYEASRAGVSVELVVRGICCLRPGVPGLSENIRVKSIIGRFLEHGRVYCFGNGHGLPSAKAAVYISSADMMPRN LDRRVEILCPLLNPTVHQQVLEQIMVANLKDTEQSWQLLPDGSSTRMKAAKGEEPFNVHNYFMTNPSLSGRGKSLKESSP RRLTRRSERHQSP
Sequences:
>Translated_733_residues MDSDQIIVIEEKNGEAEPASVVAAGPERFINRELSWLHFNRRVLEEAVNPSHPVLERVRFLSISANNLDEFFMVRVAGIK AQVREGITERSPDGLTPAEQLVLINEAVSRLASDQQAIWRDLRGILTEAGIVLLDGRDATKSQRAWIEDHFLHNIFPLLT PLAIDPAHPFPFIPSLGFTIGLQLARVSDGKSMNALIRMPGKIDRFIRLPPNGKDQSVRLMTLEQATSLFIGRLFPGYVV KGQGSFRVIRDSELEIEEEAEDLVRLFETALKRRRRGSVIRLEVDSTMPEELRAFVQRALSTADDEVLLVDGVLAMNELS QLTRVDRPDLEFPPYVPRHPERVRDHGGDIFAAIRKKDLIVHHPYESFDVVVQFLQQATRDPDVVAIKQTLYRTSNNSPI VRALAEAAEAGKSVTALVELKARFDEEANIRWARDLERAGVQVVYGFLELKTHAKLSLVVRREGNTLTTYVHTGTGNYHP VTARIYTDLSYFTSDPIIGRDAARVFNYITGYAEPSDIEKMAVSPLTLRKRMLEHIRGETAFARHGKPAAIWLKMNSLVD PDIIDALYEASRAGVSVELVVRGICCLRPGVPGLSENIRVKSIIGRFLEHGRVYCFGNGHGLPSAKAAVYISSADMMPRN LDRRVEILCPLLNPTVHQQVLEQIMVANLKDTEQSWQLLPDGSSTRMKAAKGEEPFNVHNYFMTNPSLSGRGKSLKESSP RRLTRRSERHQSP >Mature_733_residues MDSDQIIVIEEKNGEAEPASVVAAGPERFINRELSWLHFNRRVLEEAVNPSHPVLERVRFLSISANNLDEFFMVRVAGIK AQVREGITERSPDGLTPAEQLVLINEAVSRLASDQQAIWRDLRGILTEAGIVLLDGRDATKSQRAWIEDHFLHNIFPLLT PLAIDPAHPFPFIPSLGFTIGLQLARVSDGKSMNALIRMPGKIDRFIRLPPNGKDQSVRLMTLEQATSLFIGRLFPGYVV KGQGSFRVIRDSELEIEEEAEDLVRLFETALKRRRRGSVIRLEVDSTMPEELRAFVQRALSTADDEVLLVDGVLAMNELS QLTRVDRPDLEFPPYVPRHPERVRDHGGDIFAAIRKKDLIVHHPYESFDVVVQFLQQATRDPDVVAIKQTLYRTSNNSPI VRALAEAAEAGKSVTALVELKARFDEEANIRWARDLERAGVQVVYGFLELKTHAKLSLVVRREGNTLTTYVHTGTGNYHP VTARIYTDLSYFTSDPIIGRDAARVFNYITGYAEPSDIEKMAVSPLTLRKRMLEHIRGETAFARHGKPAAIWLKMNSLVD PDIIDALYEASRAGVSVELVVRGICCLRPGVPGLSENIRVKSIIGRFLEHGRVYCFGNGHGLPSAKAAVYISSADMMPRN LDRRVEILCPLLNPTVHQQVLEQIMVANLKDTEQSWQLLPDGSSTRMKAAKGEEPFNVHNYFMTNPSLSGRGKSLKESSP RRLTRRSERHQSP
Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]
COG id: COG0855
COG function: function code P; Polyphosphate kinase
Gene ontology:
Cell location: Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polyphosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788847, Length=683, Percent_Identity=35.4319180087848, Blast_Score=392, Evalue=1e-110,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003414 [H]
Pfam domain/function: PF02503 PP_kinase [H]
EC number: =2.7.4.1 [H]
Molecular weight: Translated: 82307; Mature: 82307
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSDQIIVIEEKNGEAEPASVVAAGPERFINRELSWLHFNRRVLEEAVNPSHPVLERVRF CCCCCEEEEECCCCCCCCCEEEECCHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHE LSISANNLDEFFMVRVAGIKAQVREGITERSPDGLTPAEQLVLINEAVSRLASDQQAIWR EEECCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHH DLRGILTEAGIVLLDGRDATKSQRAWIEDHFLHNIFPLLTPLAIDPAHPFPFIPSLGFTI HHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH GLQLARVSDGKSMNALIRMPGKIDRFIRLPPNGKDQSVRLMTLEQATSLFIGRLFPGYVV CEEEEEECCCCCCCCEEECCCCCCCEEECCCCCCCCCEEEEEHHHHHHHHHHHCCCCEEE KGQGSFRVIRDSELEIEEEAEDLVRLFETALKRRRRGSVIRLEVDSTMPEELRAFVQRAL ECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHH STADDEVLLVDGVLAMNELSQLTRVDRPDLEFPPYVPRHPERVRDHGGDIFAAIRKKDLI CCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCEEEEHHHCCEE VHHPYESFDVVVQFLQQATRDPDVVAIKQTLYRTSNNSPIVRALAEAAEAGKSVTALVEL EECCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCHHHHHHHHHHHCCCCEEHHHHH KARFDEEANIRWARDLERAGVQVVYGFLELKTHAKLSLVVRREGNTLTTYVHTGTGNYHP HHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEECCCCCCCE VTARIYTDLSYFTSDPIIGRDAARVFNYITGYAEPSDIEKMAVSPLTLRKRMLEHIRGET EEEEEEECHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHCCCC AFARHGKPAAIWLKMNSLVDPDIIDALYEASRAGVSVELVVRGICCLRPGVPGLSENIRV HHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCH KSIIGRFLEHGRVYCFGNGHGLPSAKAAVYISSADMMPRNLDRRVEILCPLLNPTVHQQV HHHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHH LEQIMVANLKDTEQSWQLLPDGSSTRMKAAKGEEPFNVHNYFMTNPSLSGRGKSLKESSP HHHHHHCCCCCCCHHCEECCCCCCCCEECCCCCCCCEECEEEEECCCCCCCCCCCCCCCH RRLTRRSERHQSP HHHHHHHHHCCCC >Mature Secondary Structure MDSDQIIVIEEKNGEAEPASVVAAGPERFINRELSWLHFNRRVLEEAVNPSHPVLERVRF CCCCCEEEEECCCCCCCCCEEEECCHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHE LSISANNLDEFFMVRVAGIKAQVREGITERSPDGLTPAEQLVLINEAVSRLASDQQAIWR EEECCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHH DLRGILTEAGIVLLDGRDATKSQRAWIEDHFLHNIFPLLTPLAIDPAHPFPFIPSLGFTI HHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH GLQLARVSDGKSMNALIRMPGKIDRFIRLPPNGKDQSVRLMTLEQATSLFIGRLFPGYVV CEEEEEECCCCCCCCEEECCCCCCCEEECCCCCCCCCEEEEEHHHHHHHHHHHCCCCEEE KGQGSFRVIRDSELEIEEEAEDLVRLFETALKRRRRGSVIRLEVDSTMPEELRAFVQRAL ECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHH STADDEVLLVDGVLAMNELSQLTRVDRPDLEFPPYVPRHPERVRDHGGDIFAAIRKKDLI CCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCEEEEHHHCCEE VHHPYESFDVVVQFLQQATRDPDVVAIKQTLYRTSNNSPIVRALAEAAEAGKSVTALVEL EECCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCHHHHHHHHHHHCCCCEEHHHHH KARFDEEANIRWARDLERAGVQVVYGFLELKTHAKLSLVVRREGNTLTTYVHTGTGNYHP HHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEECCCCCCCE VTARIYTDLSYFTSDPIIGRDAARVFNYITGYAEPSDIEKMAVSPLTLRKRMLEHIRGET EEEEEEECHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHCCCC AFARHGKPAAIWLKMNSLVDPDIIDALYEASRAGVSVELVVRGICCLRPGVPGLSENIRV HHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCH KSIIGRFLEHGRVYCFGNGHGLPSAKAAVYISSADMMPRNLDRRVEILCPLLNPTVHQQV HHHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHH LEQIMVANLKDTEQSWQLLPDGSSTRMKAAKGEEPFNVHNYFMTNPSLSGRGKSLKESSP HHHHHHCCCCCCCHHCEECCCCCCCCEECCCCCCCCEECEEEEECCCCCCCCCCCCCCCH RRLTRRSERHQSP HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA