Definition | Rhodopseudomonas palustris HaA2, complete genome. |
---|---|
Accession | NC_007778 |
Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is 86749611
Identifier: 86749611
GI number: 86749611
Start: 2848993
End: 2849670
Strand: Direct
Name: 86749611
Synonym: RPB_2491
Alternate gene names: NA
Gene position: 2848993-2849670 (Clockwise)
Preceding gene: 86749610
Following gene: 86749612
Centisome position: 53.44
GC content: 67.11
Gene sequence:
>678_bases GTGGTAGTCCGCGTACAACCCCGTCAACTGGCCCTGGACCTGCCGCACGCCGAAAGCCTGTCGCGCGAGGACTTCCTCGA AGGCACGGCCAATTCCTCGGCGCTGAGGCTGATCGAAAGCTGGCCCGACTGGCCGAACCGCATCATGCTGCTGGTCGGAC CGGAGGGCAGCGGCAAGAGTCATCTGGCATCGATCTGGGCCGAGCAGGCCGGCGCGCGATCGACCTCGGCTCAGGCGCTG ACCGCGGCGAACGTCCCCGGCGAGCTCGCCACTGGCGCGCTGGTGGTGGAAGACCTGACGCCGGGCAGCTTCGACGAGCG CGCGCTGTTTCATCTGATCAATCTGGCACGTGAAGACGAGGCCTATGTTCTGATCACCGCGCGGCTGGCCCCTGCGGCAT TTCCAGCCGACTTGCGCGATCTGCGGTCCCGGCTGAGGGCGGTGCCAGTGGTGACCCTGCTGCCGCCCGACGATGCATTG TTTCGGGCGCTGATCGTCAAATTCTGCGCCGACCGCCAGATGAGCATCGACGCCAATCTGGTCGGCTATCTCGCCAACAG AATCGACCGGTCTTTCGCTGCCGCGCGTCAGACGGTGGAGCGGCTGGACACCGAGGCGCTGCGTCTCGGCCGGCCAGTGA CCCGAGCGCTGGCGGCGGACGTCCTGCGCAACGACTGA
Upstream 100 bases:
>100_bases TTCTATCTCGTGGAGTGGACGCGGCATATGAGCACGATCGAGCCTGGCCACTGAAACGCGTCGGCCGGCCGCGCAGTGCG GGCCGGCATGGAGCGACCCC
Downstream 100 bases:
>100_bases GCCCCTGCGGCATCCTTGCCGGCCGGCTCGGCTTGACGCGATCTTCGCTAAGTCCCTCAATGTCATGGAAACGTCTTGCG TGTGCAGCATTGTCTCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: DNAA-Related Protein; DNA Replication Initiation ATPase; DNAA-Like Protein; Regulatory Inactivation Of DNAA Hda Protein; Chromosomal Replication Initiator Protein DNAA; Chromosomal Replication Initiator; ATPase-Like Protein Involved In DNA Replication Initiation; ATPase Involved In DNA Replication Initiation; Chromosomal Replication Initiator DNAa; ATPase; Chromosomal DNA Replication Initiator-Related Protein; DNA Replication Initiation ATPase Protein; ATPase Involved In DNA Replication Initiation-Like Protein; DNAA-Like Protein Hda
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MVVRVQPRQLALDLPHAESLSREDFLEGTANSSALRLIESWPDWPNRIMLLVGPEGSGKSHLASIWAEQAGARSTSAQAL TAANVPGELATGALVVEDLTPGSFDERALFHLINLAREDEAYVLITARLAPAAFPADLRDLRSRLRAVPVVTLLPPDDAL FRALIVKFCADRQMSIDANLVGYLANRIDRSFAAARQTVERLDTEALRLGRPVTRALAADVLRND
Sequences:
>Translated_225_residues MVVRVQPRQLALDLPHAESLSREDFLEGTANSSALRLIESWPDWPNRIMLLVGPEGSGKSHLASIWAEQAGARSTSAQAL TAANVPGELATGALVVEDLTPGSFDERALFHLINLAREDEAYVLITARLAPAAFPADLRDLRSRLRAVPVVTLLPPDDAL FRALIVKFCADRQMSIDANLVGYLANRIDRSFAAARQTVERLDTEALRLGRPVTRALAADVLRND >Mature_225_residues MVVRVQPRQLALDLPHAESLSREDFLEGTANSSALRLIESWPDWPNRIMLLVGPEGSGKSHLASIWAEQAGARSTSAQAL TAANVPGELATGALVVEDLTPGSFDERALFHLINLAREDEAYVLITARLAPAAFPADLRDLRSRLRAVPVVTLLPPDDAL FRALIVKFCADRQMSIDANLVGYLANRIDRSFAAARQTVERLDTEALRLGRPVTRALAADVLRND
Specific function: Unknown
COG id: COG0593
COG function: function code L; ATPase involved in DNA replication initiation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24554; Mature: 24554
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVRVQPRQLALDLPHAESLSREDFLEGTANSSALRLIESWPDWPNRIMLLVGPEGSGKS CEEEECHHHHEEECCCHHHCCHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHH HLASIWAEQAGARSTSAQALTAANVPGELATGALVVEDLTPGSFDERALFHLINLAREDE HHHHHHHHHCCCCCCCCHHHEECCCCCCHHCCEEEEECCCCCCCHHHHHHHHHHHHCCCC AYVLITARLAPAAFPADLRDLRSRLRAVPVVTLLPPDDALFRALIVKFCADRQMSIDANL EEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCCCCHHH VGYLANRIDRSFAAARQTVERLDTEALRLGRPVTRALAADVLRND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure MVVRVQPRQLALDLPHAESLSREDFLEGTANSSALRLIESWPDWPNRIMLLVGPEGSGKS CEEEECHHHHEEECCCHHHCCHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHH HLASIWAEQAGARSTSAQALTAANVPGELATGALVVEDLTPGSFDERALFHLINLAREDE HHHHHHHHHCCCCCCCCHHHEECCCCCCHHCCEEEEECCCCCCCHHHHHHHHHHHHCCCC AYVLITARLAPAAFPADLRDLRSRLRAVPVVTLLPPDDALFRALIVKFCADRQMSIDANL EEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCCCCHHH VGYLANRIDRSFAAARQTVERLDTEALRLGRPVTRALAADVLRND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA