Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86749611

Identifier: 86749611

GI number: 86749611

Start: 2848993

End: 2849670

Strand: Direct

Name: 86749611

Synonym: RPB_2491

Alternate gene names: NA

Gene position: 2848993-2849670 (Clockwise)

Preceding gene: 86749610

Following gene: 86749612

Centisome position: 53.44

GC content: 67.11

Gene sequence:

>678_bases
GTGGTAGTCCGCGTACAACCCCGTCAACTGGCCCTGGACCTGCCGCACGCCGAAAGCCTGTCGCGCGAGGACTTCCTCGA
AGGCACGGCCAATTCCTCGGCGCTGAGGCTGATCGAAAGCTGGCCCGACTGGCCGAACCGCATCATGCTGCTGGTCGGAC
CGGAGGGCAGCGGCAAGAGTCATCTGGCATCGATCTGGGCCGAGCAGGCCGGCGCGCGATCGACCTCGGCTCAGGCGCTG
ACCGCGGCGAACGTCCCCGGCGAGCTCGCCACTGGCGCGCTGGTGGTGGAAGACCTGACGCCGGGCAGCTTCGACGAGCG
CGCGCTGTTTCATCTGATCAATCTGGCACGTGAAGACGAGGCCTATGTTCTGATCACCGCGCGGCTGGCCCCTGCGGCAT
TTCCAGCCGACTTGCGCGATCTGCGGTCCCGGCTGAGGGCGGTGCCAGTGGTGACCCTGCTGCCGCCCGACGATGCATTG
TTTCGGGCGCTGATCGTCAAATTCTGCGCCGACCGCCAGATGAGCATCGACGCCAATCTGGTCGGCTATCTCGCCAACAG
AATCGACCGGTCTTTCGCTGCCGCGCGTCAGACGGTGGAGCGGCTGGACACCGAGGCGCTGCGTCTCGGCCGGCCAGTGA
CCCGAGCGCTGGCGGCGGACGTCCTGCGCAACGACTGA

Upstream 100 bases:

>100_bases
TTCTATCTCGTGGAGTGGACGCGGCATATGAGCACGATCGAGCCTGGCCACTGAAACGCGTCGGCCGGCCGCGCAGTGCG
GGCCGGCATGGAGCGACCCC

Downstream 100 bases:

>100_bases
GCCCCTGCGGCATCCTTGCCGGCCGGCTCGGCTTGACGCGATCTTCGCTAAGTCCCTCAATGTCATGGAAACGTCTTGCG
TGTGCAGCATTGTCTCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: DNAA-Related Protein; DNA Replication Initiation ATPase; DNAA-Like Protein; Regulatory Inactivation Of DNAA Hda Protein; Chromosomal Replication Initiator Protein DNAA; Chromosomal Replication Initiator; ATPase-Like Protein Involved In DNA Replication Initiation; ATPase Involved In DNA Replication Initiation; Chromosomal Replication Initiator DNAa; ATPase; Chromosomal DNA Replication Initiator-Related Protein; DNA Replication Initiation ATPase Protein; ATPase Involved In DNA Replication Initiation-Like Protein; DNAA-Like Protein Hda

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MVVRVQPRQLALDLPHAESLSREDFLEGTANSSALRLIESWPDWPNRIMLLVGPEGSGKSHLASIWAEQAGARSTSAQAL
TAANVPGELATGALVVEDLTPGSFDERALFHLINLAREDEAYVLITARLAPAAFPADLRDLRSRLRAVPVVTLLPPDDAL
FRALIVKFCADRQMSIDANLVGYLANRIDRSFAAARQTVERLDTEALRLGRPVTRALAADVLRND

Sequences:

>Translated_225_residues
MVVRVQPRQLALDLPHAESLSREDFLEGTANSSALRLIESWPDWPNRIMLLVGPEGSGKSHLASIWAEQAGARSTSAQAL
TAANVPGELATGALVVEDLTPGSFDERALFHLINLAREDEAYVLITARLAPAAFPADLRDLRSRLRAVPVVTLLPPDDAL
FRALIVKFCADRQMSIDANLVGYLANRIDRSFAAARQTVERLDTEALRLGRPVTRALAADVLRND
>Mature_225_residues
MVVRVQPRQLALDLPHAESLSREDFLEGTANSSALRLIESWPDWPNRIMLLVGPEGSGKSHLASIWAEQAGARSTSAQAL
TAANVPGELATGALVVEDLTPGSFDERALFHLINLAREDEAYVLITARLAPAAFPADLRDLRSRLRAVPVVTLLPPDDAL
FRALIVKFCADRQMSIDANLVGYLANRIDRSFAAARQTVERLDTEALRLGRPVTRALAADVLRND

Specific function: Unknown

COG id: COG0593

COG function: function code L; ATPase involved in DNA replication initiation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24554; Mature: 24554

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVRVQPRQLALDLPHAESLSREDFLEGTANSSALRLIESWPDWPNRIMLLVGPEGSGKS
CEEEECHHHHEEECCCHHHCCHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHH
HLASIWAEQAGARSTSAQALTAANVPGELATGALVVEDLTPGSFDERALFHLINLAREDE
HHHHHHHHHCCCCCCCCHHHEECCCCCCHHCCEEEEECCCCCCCHHHHHHHHHHHHCCCC
AYVLITARLAPAAFPADLRDLRSRLRAVPVVTLLPPDDALFRALIVKFCADRQMSIDANL
EEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCCCCHHH
VGYLANRIDRSFAAARQTVERLDTEALRLGRPVTRALAADVLRND
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MVVRVQPRQLALDLPHAESLSREDFLEGTANSSALRLIESWPDWPNRIMLLVGPEGSGKS
CEEEECHHHHEEECCCHHHCCHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHH
HLASIWAEQAGARSTSAQALTAANVPGELATGALVVEDLTPGSFDERALFHLINLAREDE
HHHHHHHHHCCCCCCCCHHHEECCCCCCHHCCEEEEECCCCCCCHHHHHHHHHHHHCCCC
AYVLITARLAPAAFPADLRDLRSRLRAVPVVTLLPPDDALFRALIVKFCADRQMSIDANL
EEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCCCCHHH
VGYLANRIDRSFAAARQTVERLDTEALRLGRPVTRALAADVLRND
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA