Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86749567
Identifier: 86749567
GI number: 86749567
Start: 2802724
End: 2803257
Strand: Direct
Name: 86749567
Synonym: RPB_2447
Alternate gene names: NA
Gene position: 2802724-2803257 (Clockwise)
Preceding gene: 86749566
Following gene: 86749568
Centisome position: 52.57
GC content: 72.1
Gene sequence:
>534_bases ATGCGTCGTTCGCACCGCCTGATCTCCCTCGCCGTGTTGCTCGCTTTGTCGAGCGGACTGACCGGCTGCGGCAGCTTGGG TGGATGGGACCCGACCGATATGTTCGACTTCCTCGACACCAAGAAGAAGCTGCCGGGCGATCGCAAGCCGGTGTTTCCCG AGGGCGTGCCGGGCCTCGAACAGGGCGTCCCCAAGAGCCTCTATCGGGGGTCGGTCGAGGAGCAGCAGCGCGAGCAGGCC GCCGCCGCGGCCACAGCTGTCGAGCCGCCACCCGCTGCGGCCCAACAGAAACGCGCCAAGCGCAGCAATTCGGCCGCCGT CCGCGCGGCGCCGCAGCCTGACGCCGCGCCCGCGCCCGAGGAAGAGGGCTCGACCGCCGCCGCACCACCGGCGCCGAAAC CCGTCAAGCAATCGCGCCGCCGCGTGACCACGCCGCCGGCGGACGACGCTGCGGCAACCGCGCCCGCGGCGAGTTCGGCG ACCGCGCCGTCGGCGTTCCCGGCTCCCTTGCCGAGCGGTACTTTCCAGCGCTGA
Upstream 100 bases:
>100_bases AGGCATTGCTGCCGCCTGCCGCCAAGAGCTGAGTTGAAGAGCTGAGTTCGACCCGTCCGGCACCAATGCCCGCTTTTGAG TTCATGTGAGACCCCCATCC
Downstream 100 bases:
>100_bases TCCGACCTTGGGGGCTCCTCCGGCGTCCCGCGACATTGACAGGCCACCGCTTCTCGGCGCACGGATCAGCCATGTCATTC ACATTCGCCATTATCGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MRRSHRLISLAVLLALSSGLTGCGSLGGWDPTDMFDFLDTKKKLPGDRKPVFPEGVPGLEQGVPKSLYRGSVEEQQREQA AAAATAVEPPPAAAQQKRAKRSNSAAVRAAPQPDAAPAPEEEGSTAAAPPAPKPVKQSRRRVTTPPADDAAATAPAASSA TAPSAFPAPLPSGTFQR
Sequences:
>Translated_177_residues MRRSHRLISLAVLLALSSGLTGCGSLGGWDPTDMFDFLDTKKKLPGDRKPVFPEGVPGLEQGVPKSLYRGSVEEQQREQA AAAATAVEPPPAAAQQKRAKRSNSAAVRAAPQPDAAPAPEEEGSTAAAPPAPKPVKQSRRRVTTPPADDAAATAPAASSA TAPSAFPAPLPSGTFQR >Mature_177_residues MRRSHRLISLAVLLALSSGLTGCGSLGGWDPTDMFDFLDTKKKLPGDRKPVFPEGVPGLEQGVPKSLYRGSVEEQQREQA AAAATAVEPPPAAAQQKRAKRSNSAAVRAAPQPDAAPAPEEEGSTAAAPPAPKPVKQSRRRVTTPPADDAAATAPAASSA TAPSAFPAPLPSGTFQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18253; Mature: 18253
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSHRLISLAVLLALSSGLTGCGSLGGWDPTDMFDFLDTKKKLPGDRKPVFPEGVPGLE CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH QGVPKSLYRGSVEEQQREQAAAAATAVEPPPAAAQQKRAKRSNSAAVRAAPQPDAAPAPE HCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCC EEGSTAAAPPAPKPVKQSRRRVTTPPADDAAATAPAASSATAPSAFPAPLPSGTFQR CCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRSHRLISLAVLLALSSGLTGCGSLGGWDPTDMFDFLDTKKKLPGDRKPVFPEGVPGLE CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH QGVPKSLYRGSVEEQQREQAAAAATAVEPPPAAAQQKRAKRSNSAAVRAAPQPDAAPAPE HCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCC EEGSTAAAPPAPKPVKQSRRRVTTPPADDAAATAPAASSATAPSAFPAPLPSGTFQR CCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA