Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86749566

Identifier: 86749566

GI number: 86749566

Start: 2802002

End: 2802655

Strand: Direct

Name: 86749566

Synonym: RPB_2446

Alternate gene names: NA

Gene position: 2802002-2802655 (Clockwise)

Preceding gene: 86749565

Following gene: 86749567

Centisome position: 52.55

GC content: 64.98

Gene sequence:

>654_bases
GTGTCTGAAATATTTAATGAAGTCGATGAAGAAGTTCGTCGCGAACGGCTCAAGCAGCTGTGGGACAAATATTCGCTCTT
CATCATCGCCGGCGCGATTCTGATTATCGCCGGGGTCGGCGGCTGGCGTGGCTATCAATACTACGAGGGCAAGAAGGCTG
CCGAAACCGGCGCCGCGTTCACCGCGGCTGCCGATCTGGCGGAGCAGAACAAGCATGCCGAAGCCGAGGCTGCCTTCAAC
AACATCGCCGCGACCGCATCGGGCGGCTATCGCACGCTGGCGCGTCTGCGCGCCGCGGCCGAGGTCGCGCAGCGCGATCC
GAAGGAAGCGGTCAAGGTCTACGACGCCATTGCTGCCGATCGCAGCGTTCCGGCGCAGGACCGCGATCTCGCGTCGCTCC
GCGCGGCGCAGTTTCTGATGGACAGCGTCGGCTACGCCGACCTGTCGCAACGGCTCGAGCCGATCGCCGGCGCGGATGCC
GCCTATCGTCACACCGCACGCGAAATGCTGGCGCTATCTGCTTGGCGCGCCGGCAATGTTGCCGCCGCGCGGCAGTGGAT
CGAGCAGATCAATACCGACGCCGGAACGCCGGCGAGCTTGCGCAATCGCGCCGAGGTGCTGCAGGCATTGCTGCCGCCTG
CCGCCAAGAGCTGA

Upstream 100 bases:

>100_bases
GCCTCCGCCATAACGCTAGGGTATCGCCGCCGCGACGTCGGGAGACGGCCGCGCGCCGGTTTTGCAGATGCGCGGCTCAG
TCGGGACAGGAAATCTATAA

Downstream 100 bases:

>100_bases
GTTGAAGAGCTGAGTTCGACCCGTCCGGCACCAATGCCCGCTTTTGAGTTCATGTGAGACCCCCATCCATGCGTCGTTCG
CACCGCCTGATCTCCCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSEIFNEVDEEVRRERLKQLWDKYSLFIIAGAILIIAGVGGWRGYQYYEGKKAAETGAAFTAAADLAEQNKHAEAEAAFN
NIAATASGGYRTLARLRAAAEVAQRDPKEAVKVYDAIAADRSVPAQDRDLASLRAAQFLMDSVGYADLSQRLEPIAGADA
AYRHTAREMLALSAWRAGNVAAARQWIEQINTDAGTPASLRNRAEVLQALLPPAAKS

Sequences:

>Translated_217_residues
MSEIFNEVDEEVRRERLKQLWDKYSLFIIAGAILIIAGVGGWRGYQYYEGKKAAETGAAFTAAADLAEQNKHAEAEAAFN
NIAATASGGYRTLARLRAAAEVAQRDPKEAVKVYDAIAADRSVPAQDRDLASLRAAQFLMDSVGYADLSQRLEPIAGADA
AYRHTAREMLALSAWRAGNVAAARQWIEQINTDAGTPASLRNRAEVLQALLPPAAKS
>Mature_216_residues
SEIFNEVDEEVRRERLKQLWDKYSLFIIAGAILIIAGVGGWRGYQYYEGKKAAETGAAFTAAADLAEQNKHAEAEAAFNN
IAATASGGYRTLARLRAAAEVAQRDPKEAVKVYDAIAADRSVPAQDRDLASLRAAQFLMDSVGYADLSQRLEPIAGADAA
YRHTAREMLALSAWRAGNVAAARQWIEQINTDAGTPASLRNRAEVLQALLPPAAKS

Specific function: Unknown

COG id: COG4649

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23495; Mature: 23363

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIFNEVDEEVRRERLKQLWDKYSLFIIAGAILIIAGVGGWRGYQYYEGKKAAETGAAF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHH
TAAADLAEQNKHAEAEAAFNNIAATASGGYRTLARLRAAAEVAQRDPKEAVKVYDAIAAD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
RSVPAQDRDLASLRAAQFLMDSVGYADLSQRLEPIAGADAAYRHTAREMLALSAWRAGNV
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCH
AAARQWIEQINTDAGTPASLRNRAEVLQALLPPAAKS
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SEIFNEVDEEVRRERLKQLWDKYSLFIIAGAILIIAGVGGWRGYQYYEGKKAAETGAAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHH
TAAADLAEQNKHAEAEAAFNNIAATASGGYRTLARLRAAAEVAQRDPKEAVKVYDAIAAD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
RSVPAQDRDLASLRAAQFLMDSVGYADLSQRLEPIAGADAAYRHTAREMLALSAWRAGNV
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCH
AAARQWIEQINTDAGTPASLRNRAEVLQALLPPAAKS
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA