Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86749566
Identifier: 86749566
GI number: 86749566
Start: 2802002
End: 2802655
Strand: Direct
Name: 86749566
Synonym: RPB_2446
Alternate gene names: NA
Gene position: 2802002-2802655 (Clockwise)
Preceding gene: 86749565
Following gene: 86749567
Centisome position: 52.55
GC content: 64.98
Gene sequence:
>654_bases GTGTCTGAAATATTTAATGAAGTCGATGAAGAAGTTCGTCGCGAACGGCTCAAGCAGCTGTGGGACAAATATTCGCTCTT CATCATCGCCGGCGCGATTCTGATTATCGCCGGGGTCGGCGGCTGGCGTGGCTATCAATACTACGAGGGCAAGAAGGCTG CCGAAACCGGCGCCGCGTTCACCGCGGCTGCCGATCTGGCGGAGCAGAACAAGCATGCCGAAGCCGAGGCTGCCTTCAAC AACATCGCCGCGACCGCATCGGGCGGCTATCGCACGCTGGCGCGTCTGCGCGCCGCGGCCGAGGTCGCGCAGCGCGATCC GAAGGAAGCGGTCAAGGTCTACGACGCCATTGCTGCCGATCGCAGCGTTCCGGCGCAGGACCGCGATCTCGCGTCGCTCC GCGCGGCGCAGTTTCTGATGGACAGCGTCGGCTACGCCGACCTGTCGCAACGGCTCGAGCCGATCGCCGGCGCGGATGCC GCCTATCGTCACACCGCACGCGAAATGCTGGCGCTATCTGCTTGGCGCGCCGGCAATGTTGCCGCCGCGCGGCAGTGGAT CGAGCAGATCAATACCGACGCCGGAACGCCGGCGAGCTTGCGCAATCGCGCCGAGGTGCTGCAGGCATTGCTGCCGCCTG CCGCCAAGAGCTGA
Upstream 100 bases:
>100_bases GCCTCCGCCATAACGCTAGGGTATCGCCGCCGCGACGTCGGGAGACGGCCGCGCGCCGGTTTTGCAGATGCGCGGCTCAG TCGGGACAGGAAATCTATAA
Downstream 100 bases:
>100_bases GTTGAAGAGCTGAGTTCGACCCGTCCGGCACCAATGCCCGCTTTTGAGTTCATGTGAGACCCCCATCCATGCGTCGTTCG CACCGCCTGATCTCCCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSEIFNEVDEEVRRERLKQLWDKYSLFIIAGAILIIAGVGGWRGYQYYEGKKAAETGAAFTAAADLAEQNKHAEAEAAFN NIAATASGGYRTLARLRAAAEVAQRDPKEAVKVYDAIAADRSVPAQDRDLASLRAAQFLMDSVGYADLSQRLEPIAGADA AYRHTAREMLALSAWRAGNVAAARQWIEQINTDAGTPASLRNRAEVLQALLPPAAKS
Sequences:
>Translated_217_residues MSEIFNEVDEEVRRERLKQLWDKYSLFIIAGAILIIAGVGGWRGYQYYEGKKAAETGAAFTAAADLAEQNKHAEAEAAFN NIAATASGGYRTLARLRAAAEVAQRDPKEAVKVYDAIAADRSVPAQDRDLASLRAAQFLMDSVGYADLSQRLEPIAGADA AYRHTAREMLALSAWRAGNVAAARQWIEQINTDAGTPASLRNRAEVLQALLPPAAKS >Mature_216_residues SEIFNEVDEEVRRERLKQLWDKYSLFIIAGAILIIAGVGGWRGYQYYEGKKAAETGAAFTAAADLAEQNKHAEAEAAFNN IAATASGGYRTLARLRAAAEVAQRDPKEAVKVYDAIAADRSVPAQDRDLASLRAAQFLMDSVGYADLSQRLEPIAGADAA YRHTAREMLALSAWRAGNVAAARQWIEQINTDAGTPASLRNRAEVLQALLPPAAKS
Specific function: Unknown
COG id: COG4649
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23495; Mature: 23363
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIFNEVDEEVRRERLKQLWDKYSLFIIAGAILIIAGVGGWRGYQYYEGKKAAETGAAF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHH TAAADLAEQNKHAEAEAAFNNIAATASGGYRTLARLRAAAEVAQRDPKEAVKVYDAIAAD HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC RSVPAQDRDLASLRAAQFLMDSVGYADLSQRLEPIAGADAAYRHTAREMLALSAWRAGNV CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCH AAARQWIEQINTDAGTPASLRNRAEVLQALLPPAAKS HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SEIFNEVDEEVRRERLKQLWDKYSLFIIAGAILIIAGVGGWRGYQYYEGKKAAETGAAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHH TAAADLAEQNKHAEAEAAFNNIAATASGGYRTLARLRAAAEVAQRDPKEAVKVYDAIAAD HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC RSVPAQDRDLASLRAAQFLMDSVGYADLSQRLEPIAGADAAYRHTAREMLALSAWRAGNV CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCH AAARQWIEQINTDAGTPASLRNRAEVLQALLPPAAKS HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA