Click here to switch to the map view.

The map label for this gene is yjeA [H]

Identifier: 86749497

GI number: 86749497

Start: 2730447

End: 2731766

Strand: Reverse

Name: yjeA [H]

Synonym: RPB_2377

Alternate gene names: 86749497

Gene position: 2731766-2730447 (Counterclockwise)

Preceding gene: 86749498

Following gene: 86749494

Centisome position: 51.24

GC content: 69.92

Gene sequence:

>1320_bases
GTGATGGCAAGTGAACTGTTTCGACGGAGAGCCCGGACCCGGTCCCTGCTCGGTATCGCCTGTGTGATTGCAGCACTCGC
CCTCCCCGCCGCCCCCGCCCTCGCCGCGGATTGCCCCGGCAATCCGGGCGCGCTCGGCACCTCCCGCACGCTGGTCGTCG
ATCCGCGCGAGCATCCGCGGATCGGCACGATGCAATATGCCGAGACGCTGCCGCTGCGGGACCACGAGGTGGTGCTGACC
TTCGACGACGGCCCGCTGCCGCGCTACAGCAATGCCGTGCTCGAGATCCTCGCCAGGGAGTGCGTCCAGGCGACGTTCTT
CGTGGTGGGACGGATGGCGAAGGCCTATCCGGAAGGCGTCCGCAGGATGCGCGATGCCGGCCACACCATCGGCACCCACA
GCCAGAACCATCCGCTGAGTTTCAACCGGATGACCGCCGAGCAGGCCAAGCAGGAAGTCGACGACGGCATCGCTTCGGTC
GCAGCCGCGCTCGGCAGCCGCGCGGCGATCGCACCGTTCTTCCGCATTCCCGGCCTGCTGCGGGCCGAAGCCGTCGAATC
CTATCTCGGCTCGCAGGGCATCCAGACCTGGAGCGCCGACTTCCCCGCCGACGACTGGCGGCACATCTCGCCCGAGGCCG
TCTACAGCCTGGCGTTGAGCCGGCTGCAGGCCAAGGGCCGCGGCGTGCTGCTGCTGCACGACATCCAGCCGCGCACGGTG
GCGGCGCTGCCGCACATCCTGCACGAGCTGAAGGCCCGCGGCTTCCGCATCGTGCATGTCGTGCCGGCGACGCCGGATCG
CCCGAAGACGCCGACCGAGCCGTCGCAATGGCGCCTGCACCCGGTTACCGAGCAGGTCGCGATCTCGCATTGGCCGAAGG
TGCCGCGCTTCAGCTATGCCAGCGCCGAGATGCTGCCGGGGCCGTCGATCGCCGATCTCGGCCTCGACATCGGCCGCGTG
CCGGAGCCGTTCGATGGCCTCCGGCATCTCGCACGCGGCCAGGTGCCGCTGCCGAAACCCGCGCCGTGGCCGCGCCAGCG
GTCGGCCGAGACCTCGACCAATCTGATCACCTTCCCGATTCCGGCCGCATCGCTGTTCAGCATTCCCGAGAAATCCCAGC
CGGAATTCCGCGCAATGACTCGCCAGCCCGGGAAGCGGGCCGCGCACGACACCGCTCCGCAGACCGCGCAGACGGAGCCG
CGTGCGATCGAGATCAGCGCTGCCGCCCGTCCGATTTCCGGCAGCGCGGCAATCGCCCCCGCCACCCTGCAACGCGGCCC
GATCACCGTCACGGCACGGCCGCGACCGCTCAATCACTGA

Upstream 100 bases:

>100_bases
CGGCTGAGAAACCGTGATCAATGCCACAGTTAAGCTGCTGTTCAGGCTGCTGACTTACGGTGAGAAGCGACTGATTGGGC
GGTCCGGAGTGCGTGGTCAC

Downstream 100 bases:

>100_bases
GGATCCGGGCGACCGACAGCCGAGCCGAGCCTGGATGAGCGCCTGCGATCGCTCAGGCTTGCGGCCGAACCATCCGCCGC
ATCACGTCGGTCTTCAGGAC

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MMASELFRRRARTRSLLGIACVIAALALPAAPALAADCPGNPGALGTSRTLVVDPREHPRIGTMQYAETLPLRDHEVVLT
FDDGPLPRYSNAVLEILARECVQATFFVVGRMAKAYPEGVRRMRDAGHTIGTHSQNHPLSFNRMTAEQAKQEVDDGIASV
AAALGSRAAIAPFFRIPGLLRAEAVESYLGSQGIQTWSADFPADDWRHISPEAVYSLALSRLQAKGRGVLLLHDIQPRTV
AALPHILHELKARGFRIVHVVPATPDRPKTPTEPSQWRLHPVTEQVAISHWPKVPRFSYASAEMLPGPSIADLGLDIGRV
PEPFDGLRHLARGQVPLPKPAPWPRQRSAETSTNLITFPIPAASLFSIPEKSQPEFRAMTRQPGKRAAHDTAPQTAQTEP
RAIEISAAARPISGSAAIAPATLQRGPITVTARPRPLNH

Sequences:

>Translated_439_residues
MMASELFRRRARTRSLLGIACVIAALALPAAPALAADCPGNPGALGTSRTLVVDPREHPRIGTMQYAETLPLRDHEVVLT
FDDGPLPRYSNAVLEILARECVQATFFVVGRMAKAYPEGVRRMRDAGHTIGTHSQNHPLSFNRMTAEQAKQEVDDGIASV
AAALGSRAAIAPFFRIPGLLRAEAVESYLGSQGIQTWSADFPADDWRHISPEAVYSLALSRLQAKGRGVLLLHDIQPRTV
AALPHILHELKARGFRIVHVVPATPDRPKTPTEPSQWRLHPVTEQVAISHWPKVPRFSYASAEMLPGPSIADLGLDIGRV
PEPFDGLRHLARGQVPLPKPAPWPRQRSAETSTNLITFPIPAASLFSIPEKSQPEFRAMTRQPGKRAAHDTAPQTAQTEP
RAIEISAAARPISGSAAIAPATLQRGPITVTARPRPLNH
>Mature_439_residues
MMASELFRRRARTRSLLGIACVIAALALPAAPALAADCPGNPGALGTSRTLVVDPREHPRIGTMQYAETLPLRDHEVVLT
FDDGPLPRYSNAVLEILARECVQATFFVVGRMAKAYPEGVRRMRDAGHTIGTHSQNHPLSFNRMTAEQAKQEVDDGIASV
AAALGSRAAIAPFFRIPGLLRAEAVESYLGSQGIQTWSADFPADDWRHISPEAVYSLALSRLQAKGRGVLLLHDIQPRTV
AALPHILHELKARGFRIVHVVPATPDRPKTPTEPSQWRLHPVTEQVAISHWPKVPRFSYASAEMLPGPSIADLGLDIGRV
PEPFDGLRHLARGQVPLPKPAPWPRQRSAETSTNLITFPIPAASLFSIPEKSQPEFRAMTRQPGKRAAHDTAPQTAQTEP
RAIEISAAARPISGSAAIAPATLQRGPITVTARPRPLNH

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021729
- InterPro:   IPR011330
- InterPro:   IPR017219
- InterPro:   IPR002509 [H]

Pfam domain/function: PF11738 DUF3298; PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 47695; Mature: 47695

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMASELFRRRARTRSLLGIACVIAALALPAAPALAADCPGNPGALGTSRTLVVDPREHPR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
IGTMQYAETLPLRDHEVVLTFDDGPLPRYSNAVLEILARECVQATFFVVGRMAKAYPEGV
CCCHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRMRDAGHTIGTHSQNHPLSFNRMTAEQAKQEVDDGIASVAAALGSRAAIAPFFRIPGLL
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHH
RAEAVESYLGSQGIQTWSADFPADDWRHISPEAVYSLALSRLQAKGRGVLLLHDIQPRTV
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHH
AALPHILHELKARGFRIVHVVPATPDRPKTPTEPSQWRLHPVTEQVAISHWPKVPRFSYA
HHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCCC
SAEMLPGPSIADLGLDIGRVPEPFDGLRHLARGQVPLPKPAPWPRQRSAETSTNLITFPI
CCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECC
PAASLFSIPEKSQPEFRAMTRQPGKRAAHDTAPQTAQTEPRAIEISAAARPISGSAAIAP
CHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCH
ATLQRGPITVTARPRPLNH
HHCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MMASELFRRRARTRSLLGIACVIAALALPAAPALAADCPGNPGALGTSRTLVVDPREHPR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
IGTMQYAETLPLRDHEVVLTFDDGPLPRYSNAVLEILARECVQATFFVVGRMAKAYPEGV
CCCHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRMRDAGHTIGTHSQNHPLSFNRMTAEQAKQEVDDGIASVAAALGSRAAIAPFFRIPGLL
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHH
RAEAVESYLGSQGIQTWSADFPADDWRHISPEAVYSLALSRLQAKGRGVLLLHDIQPRTV
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHH
AALPHILHELKARGFRIVHVVPATPDRPKTPTEPSQWRLHPVTEQVAISHWPKVPRFSYA
HHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCCC
SAEMLPGPSIADLGLDIGRVPEPFDGLRHLARGQVPLPKPAPWPRQRSAETSTNLITFPI
CCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECC
PAASLFSIPEKSQPEFRAMTRQPGKRAAHDTAPQTAQTEPRAIEISAAARPISGSAAIAP
CHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCH
ATLQRGPITVTARPRPLNH
HHCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]