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The map label for this gene is ybfB [H]

Identifier: 86749234

GI number: 86749234

Start: 2403343

End: 2404626

Strand: Reverse

Name: ybfB [H]

Synonym: RPB_2113

Alternate gene names: 86749234

Gene position: 2404626-2403343 (Counterclockwise)

Preceding gene: 86749236

Following gene: 86749232

Centisome position: 45.1

GC content: 69.24

Gene sequence:

>1284_bases
ATGATCTCGACCTGGCTGTCCGCCGCCCTGGCCCGCCGCGACATTCATTACGGCTGGGTGATGGTCGGCGTGACCTTCCT
CACGGCGCTGGTCTCGGCCGGCGCGGTCGGCGCGCCGGGCGTTTTCATTCTGCCGCTGCAGCAGGAATTCGGCTGGACCA
CCGCCGAGATTTCCTCGGCGCTGTCGATCCGTTTCATCCTGTTCGGGCTGATGGCGCCGTTCGCGGCGGCGCTGATGAAC
CGCTACGGCCTGCGCAATGTCGCGCTCGCCGGACAAGTGATCATCGCCGCGAGCCTGATCGGCTCGGTGGCGATGAGCCA
GGTCTGGCAGCTGGTGCTGCTGTGGGGCGTCGCGGTCGGGATCGGCACCGGCCTGACGGCACTGGTGCTCGGCGCCACCG
TGGCGGCACGCTGGTTCAATCATCGCCGCGGCCTCGTCGTCGGCATCCTCACCGCCAGCGTCGCCACCGGGCAATTGGTG
TTCCTGCCGATGCTGGCGAGCCTCACCGAACGTTACGGATGGCGCGTCGCGCTGCTGCTGCTGTGCGGCGGCCTCGGCGT
CGCCGCGATGGGCGTGCTGCTGATGATGCGCGACCGGCCGGGCGATCTCGGGCTGCGGCCGTTCGGCGATACCGGGAGCG
AGCCGCTGCCGCCGCCGCCGCCCGCCAATGCCCCGATCATGGCGGCGGCGCTGGGCGCGCTGCGCGACGCCGCGAAGACC
CGGGTGTTCTGGATCCTGTTCGCGACGTTCTTCATCTGCGGCGCATCGACCAACGGCCTGATCCAGGTGCACCTGATTCC
GCTATGTGCCGATTTCGGCATCCCGCAGGTGCAGGCGGCCGGGCTGCTCGCGGCGATGGGAATCTTCGATTTCGTCGGCA
CCATCCTGTCGGGCTGGCTGTCGGACCGCTACGACAATCGCTGGCTGCTGTTCTGGTATTACGGCCTGCGCGGGCTGTCG
TTGCTGTTCCTGCCGTTCAGCGATTTCACCTTCTACGGGCTGTCGCTGTTCGCGCTGTTCTACGGGCTCGACTGGATCGC
CACGGTGCCGCCGACGGTGCGGCTCACCGCGCAGAAATTCGGCCCGGAGCGCGCCGGGATCGTGTTCGGCTGGATCTTCG
CCGGCCATCAGCTCGGCGCCGCCACCGCGGCGTTCGGCGCCGGACTGTCCCGCACCGTCCTGCTCAGCTACCTGCCGGCG
TTCTTCGTCGCCGGCGCGCTGTGCATCGTCGCGGCGCTGATCGTGCTGACGATCAGCAAGCACCCGCGGCCGGCGGCGGC
CTGA

Upstream 100 bases:

>100_bases
CGCGGTGACGCCTTGCAATGCGGGCGTGGGATTATATGATCCGCATCATACATTCGCCCGCGAGCCGCTGCAGCGCCTCC
CATCCATCAGGACCCGACGC

Downstream 100 bases:

>100_bases
GCGAGCAGCGCAAGGCCGCGCGGGCGCGCGCGAGCCTTGCCCGCGGCGCCCGAAGCCTGCCCGGCTATGCCGGTTGACCT
TGCCGTCGGGGTTCCGCCGC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MISTWLSAALARRDIHYGWVMVGVTFLTALVSAGAVGAPGVFILPLQQEFGWTTAEISSALSIRFILFGLMAPFAAALMN
RYGLRNVALAGQVIIAASLIGSVAMSQVWQLVLLWGVAVGIGTGLTALVLGATVAARWFNHRRGLVVGILTASVATGQLV
FLPMLASLTERYGWRVALLLLCGGLGVAAMGVLLMMRDRPGDLGLRPFGDTGSEPLPPPPPANAPIMAAALGALRDAAKT
RVFWILFATFFICGASTNGLIQVHLIPLCADFGIPQVQAAGLLAAMGIFDFVGTILSGWLSDRYDNRWLLFWYYGLRGLS
LLFLPFSDFTFYGLSLFALFYGLDWIATVPPTVRLTAQKFGPERAGIVFGWIFAGHQLGAATAAFGAGLSRTVLLSYLPA
FFVAGALCIVAALIVLTISKHPRPAAA

Sequences:

>Translated_427_residues
MISTWLSAALARRDIHYGWVMVGVTFLTALVSAGAVGAPGVFILPLQQEFGWTTAEISSALSIRFILFGLMAPFAAALMN
RYGLRNVALAGQVIIAASLIGSVAMSQVWQLVLLWGVAVGIGTGLTALVLGATVAARWFNHRRGLVVGILTASVATGQLV
FLPMLASLTERYGWRVALLLLCGGLGVAAMGVLLMMRDRPGDLGLRPFGDTGSEPLPPPPPANAPIMAAALGALRDAAKT
RVFWILFATFFICGASTNGLIQVHLIPLCADFGIPQVQAAGLLAAMGIFDFVGTILSGWLSDRYDNRWLLFWYYGLRGLS
LLFLPFSDFTFYGLSLFALFYGLDWIATVPPTVRLTAQKFGPERAGIVFGWIFAGHQLGAATAAFGAGLSRTVLLSYLPA
FFVAGALCIVAALIVLTISKHPRPAAA
>Mature_427_residues
MISTWLSAALARRDIHYGWVMVGVTFLTALVSAGAVGAPGVFILPLQQEFGWTTAEISSALSIRFILFGLMAPFAAALMN
RYGLRNVALAGQVIIAASLIGSVAMSQVWQLVLLWGVAVGIGTGLTALVLGATVAARWFNHRRGLVVGILTASVATGQLV
FLPMLASLTERYGWRVALLLLCGGLGVAAMGVLLMMRDRPGDLGLRPFGDTGSEPLPPPPPANAPIMAAALGALRDAAKT
RVFWILFATFFICGASTNGLIQVHLIPLCADFGIPQVQAAGLLAAMGIFDFVGTILSGWLSDRYDNRWLLFWYYGLRGLS
LLFLPFSDFTFYGLSLFALFYGLDWIATVPPTVRLTAQKFGPERAGIVFGWIFAGHQLGAATAAFGAGLSRTVLLSYLPA
FFVAGALCIVAALIVLTISKHPRPAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Homo sapiens, GI291621700, Length=330, Percent_Identity=25.1515151515152, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI292781289, Length=377, Percent_Identity=24.1379310344828, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI40789261, Length=377, Percent_Identity=24.1379310344828, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI24431958, Length=346, Percent_Identity=25.4335260115607, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI42475555, Length=420, Percent_Identity=25.7142857142857, Blast_Score=69, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI32567122, Length=166, Percent_Identity=28.3132530120482, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17557434, Length=161, Percent_Identity=29.1925465838509, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17550316, Length=169, Percent_Identity=30.1775147928994, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI281360217, Length=182, Percent_Identity=29.6703296703297, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28573971, Length=182, Percent_Identity=29.6703296703297, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24652823, Length=170, Percent_Identity=29.4117647058824, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45378; Mature: 45378

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCC
>Mature Secondary Structure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CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]