| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749232
Identifier: 86749232
GI number: 86749232
Start: 2401809
End: 2402102
Strand: Reverse
Name: 86749232
Synonym: RPB_2111
Alternate gene names: NA
Gene position: 2402102-2401809 (Counterclockwise)
Preceding gene: 86749234
Following gene: 86749231
Centisome position: 45.05
GC content: 71.09
Gene sequence:
>294_bases ATGCCGCGAAGCGGAAAAACCCGCGATCCGGCCGGCGCCCCGCCGGCGTCGCCGATCGACTTGGCATTCGGCCGCTTCGT CGCCGCCGTCGCTCTCGCCGTGCTGCTGGTCGGCGGCGGGCGTCCGCGCCGAATGCCCGCTGGCGTCCGCCGTCGCCGCG GCGGCGACCTATTGCCGCATCGCCAGACGGCGATCCGCCACGCGCCGCTGCGCACCGTTCGCGCTGCGTCGTTGCTATCG CGAATCCGCAGTGACATGATCGTCGAAACGCAATTCGCCCGAGCGAATGCATGA
Upstream 100 bases:
>100_bases CACTTACGGACGAAGCTACATCAGCCGATCAGCGACGACAACCTCAACTCGTTCCGCAGTTCGACGGCGTTGCAGCTACT CGACGCAAGATTTTCGGCAG
Downstream 100 bases:
>100_bases GGGGGAGAGAAACATGATCCGACGGTTCGGTCCGCTGGCGTCCATCGCCGTCACGTGCGCGACTGTGATTGCAACTCCAG CGCGTGCCGACGAAGCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MPRSGKTRDPAGAPPASPIDLAFGRFVAAVALAVLLVGGGRPRRMPAGVRRRRGGDLLPHRQTAIRHAPLRTVRAASLLS RIRSDMIVETQFARANA
Sequences:
>Translated_97_residues MPRSGKTRDPAGAPPASPIDLAFGRFVAAVALAVLLVGGGRPRRMPAGVRRRRGGDLLPHRQTAIRHAPLRTVRAASLLS RIRSDMIVETQFARANA >Mature_96_residues PRSGKTRDPAGAPPASPIDLAFGRFVAAVALAVLLVGGGRPRRMPAGVRRRRGGDLLPHRQTAIRHAPLRTVRAASLLSR IRSDMIVETQFARANA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10400; Mature: 10269
Theoretical pI: Translated: 12.76; Mature: 12.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSGKTRDPAGAPPASPIDLAFGRFVAAVALAVLLVGGGRPRRMPAGVRRRRGGDLLPH CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCC RQTAIRHAPLRTVRAASLLSRIRSDMIVETQFARANA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PRSGKTRDPAGAPPASPIDLAFGRFVAAVALAVLLVGGGRPRRMPAGVRRRRGGDLLPH CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCC RQTAIRHAPLRTVRAASLLSRIRSDMIVETQFARANA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA