Click here to switch to the map view.

The map label for this gene is 86749201

Identifier: 86749201

GI number: 86749201

Start: 2363831

End: 2364280

Strand: Reverse

Name: 86749201

Synonym: RPB_2080

Alternate gene names: NA

Gene position: 2364280-2363831 (Counterclockwise)

Preceding gene: 86749214

Following gene: 86749197

Centisome position: 44.34

GC content: 64.67

Gene sequence:

>450_bases
ATGTTCAGGAGAATTCCCGTGTCATCATCCCGCGCCGAAACCGCGCCGTCCATGGATCAGACCGCCGCAGCCGCGGCGCT
GGTCGAACGTTTTCTCGTGGCGTCGATGGTTCCCGACCCCGAGACGGCCGGCACCTTCATGGCTCCCGACGTGGCGATCA
CCTTCACCGGCGGCCGCAAATTCCAGCATCCGCGCGAGGCGACCGCGTTCAACGCCGGCCGCTACAAATGGGTGAAGAAG
AAGATGGAGCGCACCGACGTCGCGCCCGGAAACGGCGAGACCATCGTCTACAACACCGGCACGCTGTACGGCGAATGGCC
CGACGGCACGCCGTTCGAGGGCAATCGCTATGTCGACCGTTTCGTGGTGCGCGACGGCAAGATCGTCAAGATGGACGTCT
GGAACGACAGCGCCGAGCGGTTGCTGACCCGGCACGGCATCGAGGCGTAA

Upstream 100 bases:

>100_bases
ATTATCCAGACAGCGCCCGCACAAATCGTATACAATTTTTGTTGGAAACGGATACGATATCTGGCACCGGGCTTGCTTGG
ACCGCCCCGCCCGTTGTCGC

Downstream 100 bases:

>100_bases
GCATTGCGAGCGAAGCGAAGTCATGACGCTGTTGGCGCGGCTCAACGCTTCTTCGCGCCGGCTTTCCTGGTCTTCGGCAA
CGCGGCCTCTTTCGCATAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MFRRIPVSSSRAETAPSMDQTAAAAALVERFLVASMVPDPETAGTFMAPDVAITFTGGRKFQHPREATAFNAGRYKWVKK
KMERTDVAPGNGETIVYNTGTLYGEWPDGTPFEGNRYVDRFVVRDGKIVKMDVWNDSAERLLTRHGIEA

Sequences:

>Translated_149_residues
MFRRIPVSSSRAETAPSMDQTAAAAALVERFLVASMVPDPETAGTFMAPDVAITFTGGRKFQHPREATAFNAGRYKWVKK
KMERTDVAPGNGETIVYNTGTLYGEWPDGTPFEGNRYVDRFVVRDGKIVKMDVWNDSAERLLTRHGIEA
>Mature_149_residues
MFRRIPVSSSRAETAPSMDQTAAAAALVERFLVASMVPDPETAGTFMAPDVAITFTGGRKFQHPREATAFNAGRYKWVKK
KMERTDVAPGNGETIVYNTGTLYGEWPDGTPFEGNRYVDRFVVRDGKIVKMDVWNDSAERLLTRHGIEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16574; Mature: 16574

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRRIPVSSSRAETAPSMDQTAAAAALVERFLVASMVPDPETAGTFMAPDVAITFTGGRK
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCEEEEEECCCC
FQHPREATAFNAGRYKWVKKKMERTDVAPGNGETIVYNTGTLYGEWPDGTPFEGNRYVDR
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCCCCCCCCCHHEEE
FVVRDGKIVKMDVWNDSAERLLTRHGIEA
EEECCCCEEEEECCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MFRRIPVSSSRAETAPSMDQTAAAAALVERFLVASMVPDPETAGTFMAPDVAITFTGGRK
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCEEEEEECCCC
FQHPREATAFNAGRYKWVKKKMERTDVAPGNGETIVYNTGTLYGEWPDGTPFEGNRYVDR
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCCCCCCCCCHHEEE
FVVRDGKIVKMDVWNDSAERLLTRHGIEA
EEECCCCEEEEECCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA