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The map label for this gene is ybdL [C]

Identifier: 86749197

GI number: 86749197

Start: 2358580

End: 2360043

Strand: Reverse

Name: ybdL [C]

Synonym: RPB_2076

Alternate gene names: 86749197

Gene position: 2360043-2358580 (Counterclockwise)

Preceding gene: 86749201

Following gene: 86749193

Centisome position: 44.26

GC content: 69.95

Gene sequence:

>1464_bases
TTGCGAGTATTTCCTCATCGACGCGCGTACCGCAAGCGTCGTCCGCTCTCCCGGATCGTCGCGATGACCTATCGCTCGCT
GGAACGCGCCAACGCTTACTTCTACGATCCGGCGCGGCGCCGCGCGGTGATCGCGCGCCATGGCGGCGTCGGCTATCTGT
CCTCGGGCGTCAATCATCTGCAGACGCCGCGCGTGCTGCTCGATCTCGCCGCGCGCGAATTGCGCGAGCGGCGGCTGATC
GAGAACTACACCGCGCCCGGCGGCGCGCTCGGCATCGGCGCGGCGATCGCCTTCGAGATGCACGACCGGCTCGGCCGCCC
GGCCCGCGGTGCGATCGCGCCCGCCAATGTCTGCCTCACCGTCGGCGCCACCGGCGCGCTCGCCGGCGCCTTCCGCTATC
TGGCAGACGAAGTCTGTGCCCGCAGCGCGCTGGTGCTGGGGCTGAACTACAGCTTCTTCTCCATCGTCTGCGACGAGGTC
GGCATCGCCTATCGCATCGCGCGGTCCGAGCTGCGCGACCGCCTGCTGCCGACCGCCGACGAGGCCTGCGCGCGGATCGC
CGCGGAGCGGCCGGACGTCGTCGTGCTGTCGCAGCCGACCAATCCGTCCGGCGAGACCTACGACTCCGGCGAATTGCGCC
GTGTCGTCGACGCCGTCGCGCAGGCCGGCGGCTGGCTGGTGTTCGACGAGGTGCCGTCGCTCGCCGCCGCCGACGAGGAC
GATCTGCCGGCGCCGCTTGCGGACGACACGCTCGCGACGTTTCCGCCGCGGCTGATCTGGATCGGCAGCTACTCGAAATC
GCGCAGCCTCGCCGGCCTGCGCGCCGGCTATCTGCTGGCGGCGCAGCCGGTGGTGGATTTCGTCCGCAAGCACAATGAGC
GGCAATCCTGGTCGCCGGTCAATGCCGGCTCCAGCGCGCTGACCGCCGACATGATCCTGCGGGTGATGGCGCGGCGGCTG
CGCCGCTCGCCGGGCCGCGACGCGCAGCGCATCGTCGCCCGCACCGCGCGCGACGCCCGGCACTATCTCGAACTGTTCGC
GCCGTTCTCCGACGATTTCGCCCGCTTCGACGGGATCTGGCGCTTTCTCGACGGCGAGTTGGACTGGCCGACGGCGCTGG
AGAGCTACACGGCCGACCTCGCCACCATCGGCGCGACCTGCCGCGCCAACTGGAGTGACTTCGAACAGCGGATCGGCCCG
TATCTCGCGCACCGCATCGCCTTGCAGTCCGGCTTCAACCATTGTGTCCGGCTCGCGACCGGGATGACCGAATGGGACTT
CGTCACCGCCGCTTTCGACCAGGCGGGCACCGATTTCTACACCGAGACGGTGTTTGCCGATCACGACGACGCCTCCTCGA
CAGACTTCTGGGTCCGGGTCTCCTGCGCCGCCGAGCCCGACATGTTCGAACGCGGCGTCGATCGTCTCGCGCACTTCCTC
GACGCCGCGTCAGCCCGCCGCTGA

Upstream 100 bases:

>100_bases
CCTGCGCCGCGCACTTCGATCAGCAGTTCGTCTCCGCTGCTACACGACGCGCGGATCATGCTGCGATCATCGCGATTGAA
GTTGCGCATCTGCACAATCT

Downstream 100 bases:

>100_bases
CAGCGCCGGGCGCCGGTCGTCGGCGAGGATCAGCGCCTGCACCTCGCGGATCGCGGGGTCGCGGTGCTTGGCGAAAAACA
GATCGAAACTGTCGTCGAAG

Product: aminotransferase, class I and II

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MRVFPHRRAYRKRRPLSRIVAMTYRSLERANAYFYDPARRRAVIARHGGVGYLSSGVNHLQTPRVLLDLAARELRERRLI
ENYTAPGGALGIGAAIAFEMHDRLGRPARGAIAPANVCLTVGATGALAGAFRYLADEVCARSALVLGLNYSFFSIVCDEV
GIAYRIARSELRDRLLPTADEACARIAAERPDVVVLSQPTNPSGETYDSGELRRVVDAVAQAGGWLVFDEVPSLAAADED
DLPAPLADDTLATFPPRLIWIGSYSKSRSLAGLRAGYLLAAQPVVDFVRKHNERQSWSPVNAGSSALTADMILRVMARRL
RRSPGRDAQRIVARTARDARHYLELFAPFSDDFARFDGIWRFLDGELDWPTALESYTADLATIGATCRANWSDFEQRIGP
YLAHRIALQSGFNHCVRLATGMTEWDFVTAAFDQAGTDFYTETVFADHDDASSTDFWVRVSCAAEPDMFERGVDRLAHFL
DAASARR

Sequences:

>Translated_487_residues
MRVFPHRRAYRKRRPLSRIVAMTYRSLERANAYFYDPARRRAVIARHGGVGYLSSGVNHLQTPRVLLDLAARELRERRLI
ENYTAPGGALGIGAAIAFEMHDRLGRPARGAIAPANVCLTVGATGALAGAFRYLADEVCARSALVLGLNYSFFSIVCDEV
GIAYRIARSELRDRLLPTADEACARIAAERPDVVVLSQPTNPSGETYDSGELRRVVDAVAQAGGWLVFDEVPSLAAADED
DLPAPLADDTLATFPPRLIWIGSYSKSRSLAGLRAGYLLAAQPVVDFVRKHNERQSWSPVNAGSSALTADMILRVMARRL
RRSPGRDAQRIVARTARDARHYLELFAPFSDDFARFDGIWRFLDGELDWPTALESYTADLATIGATCRANWSDFEQRIGP
YLAHRIALQSGFNHCVRLATGMTEWDFVTAAFDQAGTDFYTETVFADHDDASSTDFWVRVSCAAEPDMFERGVDRLAHFL
DAASARR
>Mature_487_residues
MRVFPHRRAYRKRRPLSRIVAMTYRSLERANAYFYDPARRRAVIARHGGVGYLSSGVNHLQTPRVLLDLAARELRERRLI
ENYTAPGGALGIGAAIAFEMHDRLGRPARGAIAPANVCLTVGATGALAGAFRYLADEVCARSALVLGLNYSFFSIVCDEV
GIAYRIARSELRDRLLPTADEACARIAAERPDVVVLSQPTNPSGETYDSGELRRVVDAVAQAGGWLVFDEVPSLAAADED
DLPAPLADDTLATFPPRLIWIGSYSKSRSLAGLRAGYLLAAQPVVDFVRKHNERQSWSPVNAGSSALTADMILRVMARRL
RRSPGRDAQRIVARTARDARHYLELFAPFSDDFARFDGIWRFLDGELDWPTALESYTADLATIGATCRANWSDFEQRIGP
YLAHRIALQSGFNHCVRLATGMTEWDFVTAAFDQAGTDFYTETVFADHDDASSTDFWVRVSCAAEPDMFERGVDRLAHFL
DAASARR

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.6.1.- [C]

Molecular weight: Translated: 53909; Mature: 53909

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: PS00105 AA_TRANSFER_CLASS_1 ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVFPHRRAYRKRRPLSRIVAMTYRSLERANAYFYDPARRRAVIARHGGVGYLSSGVNHL
CCCCCCHHHHHHHCHHHHHHHHHHHHHHHCCCEEECHHHHCEEEEECCCCHHHHHCHHHH
QTPRVLLDLAARELRERRLIENYTAPGGALGIGAAIAFEMHDRLGRPARGAIAPANVCLT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
VGATGALAGAFRYLADEVCARSALVLGLNYSFFSIVCDEVGIAYRIARSELRDRLLPTAD
ECCHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EACARIAAERPDVVVLSQPTNPSGETYDSGELRRVVDAVAQAGGWLVFDEVPSLAAADED
HHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
DLPAPLADDTLATFPPRLIWIGSYSKSRSLAGLRAGYLLAAQPVVDFVRKHNERQSWSPV
CCCCCCCCCCHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NAGSSALTADMILRVMARRLRRSPGRDAQRIVARTARDARHYLELFAPFSDDFARFDGIW
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
RFLDGELDWPTALESYTADLATIGATCRANWSDFEQRIGPYLAHRIALQSGFNHCVRLAT
HHHCCCCCCCHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GMTEWDFVTAAFDQAGTDFYTETVFADHDDASSTDFWVRVSCAAEPDMFERGVDRLAHFL
CCCHHHHHHHHHHHCCCCHHHHCEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH
DAASARR
HHHHCCC
>Mature Secondary Structure
MRVFPHRRAYRKRRPLSRIVAMTYRSLERANAYFYDPARRRAVIARHGGVGYLSSGVNHL
CCCCCCHHHHHHHCHHHHHHHHHHHHHHHCCCEEECHHHHCEEEEECCCCHHHHHCHHHH
QTPRVLLDLAARELRERRLIENYTAPGGALGIGAAIAFEMHDRLGRPARGAIAPANVCLT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
VGATGALAGAFRYLADEVCARSALVLGLNYSFFSIVCDEVGIAYRIARSELRDRLLPTAD
ECCHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EACARIAAERPDVVVLSQPTNPSGETYDSGELRRVVDAVAQAGGWLVFDEVPSLAAADED
HHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
DLPAPLADDTLATFPPRLIWIGSYSKSRSLAGLRAGYLLAAQPVVDFVRKHNERQSWSPV
CCCCCCCCCCHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NAGSSALTADMILRVMARRLRRSPGRDAQRIVARTARDARHYLELFAPFSDDFARFDGIW
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
RFLDGELDWPTALESYTADLATIGATCRANWSDFEQRIGPYLAHRIALQSGFNHCVRLAT
HHHCCCCCCCHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GMTEWDFVTAAFDQAGTDFYTETVFADHDDASSTDFWVRVSCAAEPDMFERGVDRLAHFL
CCCHHHHHHHHHHHCCCCHHHHCEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH
DAASARR
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA