| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is fabG [H]
Identifier: 86749214
GI number: 86749214
Start: 2378657
End: 2379406
Strand: Reverse
Name: fabG [H]
Synonym: RPB_2093
Alternate gene names: 86749214
Gene position: 2379406-2378657 (Counterclockwise)
Preceding gene: 86749215
Following gene: 86749201
Centisome position: 44.63
GC content: 63.6
Gene sequence:
>750_bases ATGAACACCATCGATCTCAACCATCGCTGCGCCGTGGTCACCGGCGGCGCGCAGGGGTTCGGGCGGGCGATCGCCGAGCG GTTTGCGGCGTCGGGTGCGCGGGTGGCGATCTGGGATCACGACATCGCGCTGGCCGAGACCACCGCCAAGGAAATCGGCG ACGATGTCGTCACCGCCTATCAGGTCGACGTCACCGATCCAGCCGCGGTCGACAAGGCGCGCGACGCGACGATGGCAGCG TTCGGCAAGATCGACATTCTGGTCAACAATGCCGGCATCGCCGGCATCAACAAGACGGTGTGGGACACCGACTACGAGGA ATGGCGTAAGGTGCTGCGGATCAATCTCGACGGTCCGTTCATCGTCTGCAAGTCGATCGTGCCGTTGATGATCGCGCACA AATACGGCCGCATCGTCAATATTGCCTCCATCGCCGGCAAGGAAGGCAACCCCAACGCGGCGCACTACTCGGCCTCGAAA GCCGGGCTGATCGCGCTGACCAAATCGCTCGGCAAGGAGCTGGCGTCCTATGACATCGCCGTCAACGCGGTGACGCCGGC GGCGGCGCGGACCGCGATCTTCGATCAGATGACGCAACAGCATATCGACTTCATGCTGTCGAAAATCCCCAAGGGCCGCT TCGTGCTGGTGGAAGAACTGGCCGCGATGGTGGCGTGGCTAGCGTCGGAAGACTGCGCGTTCTCGACCGGCGCGGTGTTC GACATTTCGGGCGGCCGGGCGACGTACTGA
Upstream 100 bases:
>100_bases ACGAAGCAATCCATAGCGCCGAGCACGTGCCGCGGGATTGCTTCGCTTCGCTCGCAATGACGGAGAGATACTGAGAATTG GACAGAAAGGCGCGTCAACC
Downstream 100 bases:
>100_bases ACGAAGGCTGTACGACCAACCGTTCGTCATTCCGGGGCACGACAGCGAAGCTGGCGTGAACCCGGAATGACGAACGAGAT CAAGTGTTGTGCGGGGCGCG
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MNTIDLNHRCAVVTGGAQGFGRAIAERFAASGARVAIWDHDIALAETTAKEIGDDVVTAYQVDVTDPAAVDKARDATMAA FGKIDILVNNAGIAGINKTVWDTDYEEWRKVLRINLDGPFIVCKSIVPLMIAHKYGRIVNIASIAGKEGNPNAAHYSASK AGLIALTKSLGKELASYDIAVNAVTPAAARTAIFDQMTQQHIDFMLSKIPKGRFVLVEELAAMVAWLASEDCAFSTGAVF DISGGRATY
Sequences:
>Translated_249_residues MNTIDLNHRCAVVTGGAQGFGRAIAERFAASGARVAIWDHDIALAETTAKEIGDDVVTAYQVDVTDPAAVDKARDATMAA FGKIDILVNNAGIAGINKTVWDTDYEEWRKVLRINLDGPFIVCKSIVPLMIAHKYGRIVNIASIAGKEGNPNAAHYSASK AGLIALTKSLGKELASYDIAVNAVTPAAARTAIFDQMTQQHIDFMLSKIPKGRFVLVEELAAMVAWLASEDCAFSTGAVF DISGGRATY >Mature_249_residues MNTIDLNHRCAVVTGGAQGFGRAIAERFAASGARVAIWDHDIALAETTAKEIGDDVVTAYQVDVTDPAAVDKARDATMAA FGKIDILVNNAGIAGINKTVWDTDYEEWRKVLRINLDGPFIVCKSIVPLMIAHKYGRIVNIASIAGKEGNPNAAHYSASK AGLIALTKSLGKELASYDIAVNAVTPAAARTAIFDQMTQQHIDFMLSKIPKGRFVLVEELAAMVAWLASEDCAFSTGAVF DISGGRATY
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=251, Percent_Identity=33.4661354581673, Blast_Score=129, Evalue=2e-30, Organism=Homo sapiens, GI40254992, Length=236, Percent_Identity=33.8983050847458, Blast_Score=122, Evalue=2e-28, Organism=Homo sapiens, GI19923817, Length=255, Percent_Identity=32.156862745098, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI4758504, Length=211, Percent_Identity=33.6492890995261, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI32483357, Length=244, Percent_Identity=30.327868852459, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI20149619, Length=194, Percent_Identity=32.4742268041237, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI4504505, Length=252, Percent_Identity=30.1587301587302, Blast_Score=98, Evalue=8e-21, Organism=Homo sapiens, GI83715985, Length=211, Percent_Identity=32.2274881516588, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI59889578, Length=225, Percent_Identity=30.2222222222222, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI7705925, Length=244, Percent_Identity=29.0983606557377, Blast_Score=91, Evalue=7e-19, Organism=Homo sapiens, GI66933014, Length=226, Percent_Identity=29.646017699115, Blast_Score=91, Evalue=7e-19, Organism=Homo sapiens, GI5031737, Length=258, Percent_Identity=29.4573643410853, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI7706318, Length=190, Percent_Identity=30, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI210032110, Length=170, Percent_Identity=31.1764705882353, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI31542939, Length=210, Percent_Identity=30.4761904761905, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI40807363, Length=193, Percent_Identity=31.0880829015544, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI10190704, Length=246, Percent_Identity=28.0487804878049, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI33667109, Length=209, Percent_Identity=33.0143540669856, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI126723191, Length=181, Percent_Identity=30.939226519337, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI157739938, Length=197, Percent_Identity=26.3959390862944, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI4503301, Length=226, Percent_Identity=28.7610619469027, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI310128830, Length=208, Percent_Identity=30.7692307692308, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI310115468, Length=208, Percent_Identity=30.7692307692308, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI142976729, Length=170, Percent_Identity=30.5882352941176, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=27.2, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI50726952, Length=184, Percent_Identity=33.1521739130435, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI224922801, Length=176, Percent_Identity=31.8181818181818, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI4503817, Length=190, Percent_Identity=29.4736842105263, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI302344755, Length=111, Percent_Identity=36.036036036036, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI40254986, Length=216, Percent_Identity=29.6296296296296, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1787335, Length=245, Percent_Identity=37.5510204081633, Blast_Score=160, Evalue=8e-41, Organism=Escherichia coli, GI87082100, Length=250, Percent_Identity=33.6, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI1788459, Length=241, Percent_Identity=32.3651452282158, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI87082160, Length=253, Percent_Identity=32.8063241106719, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1789057, Length=265, Percent_Identity=29.811320754717, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI2367175, Length=251, Percent_Identity=32.2709163346614, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1790717, Length=238, Percent_Identity=27.3109243697479, Blast_Score=97, Evalue=8e-22, Organism=Escherichia coli, GI1789208, Length=251, Percent_Identity=28.2868525896414, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI1787905, Length=247, Percent_Identity=28.3400809716599, Blast_Score=91, Evalue=5e-20, Organism=Escherichia coli, GI1789378, Length=248, Percent_Identity=29.4354838709677, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1787820, Length=218, Percent_Identity=27.0642201834862, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI2367365, Length=240, Percent_Identity=30.8333333333333, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1786812, Length=239, Percent_Identity=28.8702928870293, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787526, Length=246, Percent_Identity=23.5772357723577, Blast_Score=72, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17555706, Length=241, Percent_Identity=36.0995850622407, Blast_Score=154, Evalue=4e-38, Organism=Caenorhabditis elegans, GI25147288, Length=243, Percent_Identity=36.2139917695473, Blast_Score=133, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17562904, Length=247, Percent_Identity=33.1983805668016, Blast_Score=114, Evalue=5e-26, Organism=Caenorhabditis elegans, GI17508895, Length=196, Percent_Identity=31.6326530612245, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI193203115, Length=195, Percent_Identity=34.3589743589744, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI193203117, Length=196, Percent_Identity=33.6734693877551, Blast_Score=103, Evalue=9e-23, Organism=Caenorhabditis elegans, GI71994604, Length=251, Percent_Identity=31.4741035856574, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17562910, Length=259, Percent_Identity=30.5019305019305, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17560676, Length=249, Percent_Identity=30.9236947791165, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17538182, Length=230, Percent_Identity=32.1739130434783, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17536025, Length=254, Percent_Identity=31.8897637795276, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17562906, Length=238, Percent_Identity=30.672268907563, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17536651, Length=251, Percent_Identity=31.4741035856574, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17559104, Length=238, Percent_Identity=31.5126050420168, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17564282, Length=194, Percent_Identity=32.9896907216495, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17561402, Length=245, Percent_Identity=29.3877551020408, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17568967, Length=209, Percent_Identity=31.1004784688995, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17562908, Length=238, Percent_Identity=30.672268907563, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17531453, Length=205, Percent_Identity=33.1707317073171, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17562990, Length=234, Percent_Identity=31.6239316239316, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17560150, Length=242, Percent_Identity=30.5785123966942, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17561272, Length=251, Percent_Identity=33.8645418326693, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71994600, Length=250, Percent_Identity=29.2, Blast_Score=90, Evalue=8e-19, Organism=Caenorhabditis elegans, GI72000259, Length=237, Percent_Identity=30.379746835443, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17538486, Length=240, Percent_Identity=32.9166666666667, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI115534694, Length=247, Percent_Identity=29.1497975708502, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI193204405, Length=239, Percent_Identity=29.7071129707113, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17560332, Length=245, Percent_Identity=29.3877551020408, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17563726, Length=242, Percent_Identity=28.099173553719, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17538480, Length=244, Percent_Identity=29.5081967213115, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17565030, Length=237, Percent_Identity=31.6455696202532, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17560220, Length=199, Percent_Identity=31.6582914572864, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17551412, Length=247, Percent_Identity=28.7449392712551, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI32563809, Length=202, Percent_Identity=30.6930693069307, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17507613, Length=202, Percent_Identity=30.6930693069307, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17544670, Length=257, Percent_Identity=24.9027237354086, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI212646214, Length=203, Percent_Identity=30.5418719211823, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17567345, Length=187, Percent_Identity=29.9465240641711, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI115534660, Length=207, Percent_Identity=27.536231884058, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71982365, Length=204, Percent_Identity=26.9607843137255, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=251, Percent_Identity=29.4820717131474, Blast_Score=102, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6323882, Length=193, Percent_Identity=30.0518134715026, Blast_Score=76, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6324126, Length=248, Percent_Identity=29.8387096774194, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6322067, Length=213, Percent_Identity=27.6995305164319, Blast_Score=68, Evalue=1e-12, Organism=Drosophila melanogaster, GI23397609, Length=249, Percent_Identity=36.144578313253, Blast_Score=133, Evalue=1e-31, Organism=Drosophila melanogaster, GI21355319, Length=244, Percent_Identity=34.4262295081967, Blast_Score=123, Evalue=1e-28, Organism=Drosophila melanogaster, GI24639444, Length=245, Percent_Identity=32.2448979591837, Blast_Score=119, Evalue=1e-27, Organism=Drosophila melanogaster, GI24644339, Length=254, Percent_Identity=30.3149606299213, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI17737361, Length=217, Percent_Identity=34.1013824884793, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI21357041, Length=249, Percent_Identity=30.9236947791165, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI28571526, Length=248, Percent_Identity=32.258064516129, Blast_Score=101, Evalue=5e-22, Organism=Drosophila melanogaster, GI18859837, Length=254, Percent_Identity=31.8897637795276, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24649181, Length=187, Percent_Identity=32.0855614973262, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI21358495, Length=198, Percent_Identity=30.3030303030303, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI21355631, Length=244, Percent_Identity=27.4590163934426, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24643142, Length=253, Percent_Identity=31.2252964426877, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24644337, Length=256, Percent_Identity=31.640625, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24581726, Length=196, Percent_Identity=30.1020408163265, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI21357673, Length=205, Percent_Identity=32.6829268292683, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI24640492, Length=212, Percent_Identity=28.7735849056604, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI221331218, Length=201, Percent_Identity=31.8407960199005, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24640442, Length=200, Percent_Identity=29.5, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24665243, Length=201, Percent_Identity=31.8407960199005, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI281364892, Length=214, Percent_Identity=28.5046728971963, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI221510726, Length=205, Percent_Identity=31.219512195122, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI221331216, Length=202, Percent_Identity=31.6831683168317, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24665247, Length=202, Percent_Identity=31.6831683168317, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26561; Mature: 26561
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTIDLNHRCAVVTGGAQGFGRAIAERFAASGARVAIWDHDIALAETTAKEIGDDVVTAY CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCEEEEE QVDVTDPAAVDKARDATMAAFGKIDILVNNAGIAGINKTVWDTDYEEWRKVLRINLDGPF EEECCCCHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCHHHHHHHEEECCCCCC IVCKSIVPLMIAHKYGRIVNIASIAGKEGNPNAAHYSASKAGLIALTKSLGKELASYDIA HHHHHHHHHHHHHHHCCEEEEHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHEEE VNAVTPAAARTAIFDQMTQQHIDFMLSKIPKGRFVLVEELAAMVAWLASEDCAFSTGAVF EEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCEE DISGGRATY ECCCCCCCC >Mature Secondary Structure MNTIDLNHRCAVVTGGAQGFGRAIAERFAASGARVAIWDHDIALAETTAKEIGDDVVTAY CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCEEEEE QVDVTDPAAVDKARDATMAAFGKIDILVNNAGIAGINKTVWDTDYEEWRKVLRINLDGPF EEECCCCHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCHHHHHHHEEECCCCCC IVCKSIVPLMIAHKYGRIVNIASIAGKEGNPNAAHYSASKAGLIALTKSLGKELASYDIA HHHHHHHHHHHHHHHCCEEEEHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHEEE VNAVTPAAARTAIFDQMTQQHIDFMLSKIPKGRFVLVEELAAMVAWLASEDCAFSTGAVF EEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCEE DISGGRATY ECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8759840; 9384377; 9534248; 8654983 [H]