Click here to switch to the map view.

The map label for this gene is 86749076

Identifier: 86749076

GI number: 86749076

Start: 2218647

End: 2219201

Strand: Reverse

Name: 86749076

Synonym: RPB_1953

Alternate gene names: NA

Gene position: 2219201-2218647 (Counterclockwise)

Preceding gene: 86749077

Following gene: 86749073

Centisome position: 41.62

GC content: 52.97

Gene sequence:

>555_bases
ATGGTGGCCTGGTGGAAACGAAATAGACCGGTCGACCCTCAAGATTCGGCTCCTTTGATAGCAACAGAATCTCGTTTGTC
GGGATCGTCGGAATGGAGTGAGCTTGAGCTGCAAGCCGAGATCAAACGTAGGCAAGAAGAAGCACGCAGGGTCGAAGCTG
CCGTGCTCCGTAGACGACGAGAACAGGAGGAGCAGCTGTCTCGCGAGAAGGCCGCCTATGCGGCCGGCGTTTCACTTTGC
ACCGATCCTGATTTCATCAACTCCTTACTCAAGGACTTGAGACGCCGGATCTCTGCTGGAGATAAGCGGCCGCTAGATAT
TACAGATTTCCTTTGGTCGGCGCTTATCAAGAAGATCAATACGATCTCTGTCGAATGGAATCAGTCGCTCGAGGGGATGC
GAGAAGCGCTGCCCGCCTCTTTGAAACCGCATGGTCTCAGAGTTATCGACTTCACTCATGAGTATGAGACAATCGAGGAA
ACCGAAAGCGGCCTCGGCGGTATATCGAGATCCACCGAAAAGCACACGATGAAAGGACTTGCTGTCACCTACTAG

Upstream 100 bases:

>100_bases
AGACTCGCTAACTACAATATTACCATCGAGCGTTTGACTCTCTTTCAAAACGAAACCACTTACAATACGGTCCGTTCGCT
ACAAATCTCCAAGGGGTGCA

Downstream 100 bases:

>100_bases
CACACTGGCCGACAATAAATTCCATTCAATTCGATATCGCCGGCCGGCGTGGTTCGCCAGCCCGTAGGATGGGTTGAGCT
CTTGCGAAACCCATCGCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MVAWWKRNRPVDPQDSAPLIATESRLSGSSEWSELELQAEIKRRQEEARRVEAAVLRRRREQEEQLSREKAAYAAGVSLC
TDPDFINSLLKDLRRRISAGDKRPLDITDFLWSALIKKINTISVEWNQSLEGMREALPASLKPHGLRVIDFTHEYETIEE
TESGLGGISRSTEKHTMKGLAVTY

Sequences:

>Translated_184_residues
MVAWWKRNRPVDPQDSAPLIATESRLSGSSEWSELELQAEIKRRQEEARRVEAAVLRRRREQEEQLSREKAAYAAGVSLC
TDPDFINSLLKDLRRRISAGDKRPLDITDFLWSALIKKINTISVEWNQSLEGMREALPASLKPHGLRVIDFTHEYETIEE
TESGLGGISRSTEKHTMKGLAVTY
>Mature_184_residues
MVAWWKRNRPVDPQDSAPLIATESRLSGSSEWSELELQAEIKRRQEEARRVEAAVLRRRREQEEQLSREKAAYAAGVSLC
TDPDFINSLLKDLRRRISAGDKRPLDITDFLWSALIKKINTISVEWNQSLEGMREALPASLKPHGLRVIDFTHEYETIEE
TESGLGGISRSTEKHTMKGLAVTY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21020; Mature: 21020

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAWWKRNRPVDPQDSAPLIATESRLSGSSEWSELELQAEIKRRQEEARRVEAAVLRRRR
CCCCCCCCCCCCCCCCCCEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQEEQLSREKAAYAAGVSLCTDPDFINSLLKDLRRRISAGDKRPLDITDFLWSALIKKIN
HHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
TISVEWNQSLEGMREALPASLKPHGLRVIDFTHEYETIEETESGLGGISRSTEKHTMKGL
HEEEEHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHCCC
AVTY
EECC
>Mature Secondary Structure
MVAWWKRNRPVDPQDSAPLIATESRLSGSSEWSELELQAEIKRRQEEARRVEAAVLRRRR
CCCCCCCCCCCCCCCCCCEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQEEQLSREKAAYAAGVSLCTDPDFINSLLKDLRRRISAGDKRPLDITDFLWSALIKKIN
HHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
TISVEWNQSLEGMREALPASLKPHGLRVIDFTHEYETIEETESGLGGISRSTEKHTMKGL
HEEEEHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHCCC
AVTY
EECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA