Click here to switch to the map view.

The map label for this gene is 86749073

Identifier: 86749073

GI number: 86749073

Start: 2216449

End: 2216970

Strand: Reverse

Name: 86749073

Synonym: RPB_1950

Alternate gene names: NA

Gene position: 2216970-2216449 (Counterclockwise)

Preceding gene: 86749076

Following gene: 86749070

Centisome position: 41.58

GC content: 68.2

Gene sequence:

>522_bases
ATGCGCCGACGCACCCGTGACTACGGTCCCCGCCCCTCAACTGCCGCGCCGCGCCCGGTGCTGCTGGCGGCGGCGCGGGA
TTTCGTGCGGGCGGCGGCGCAGATCGAGGGCGTGCGGCGCATCGCCCTGATAGGCTCGCTCGTGACCGACAAGCCGGCGC
CGAAGGACATCGACCTGCTGGTGACGATCGACGCGGCGATGGATCTCGACGATCTCGCGCGCACCGGCCGGCAGATGCAG
GGCAAGGCCAACAGAGTCAATCTCGGCGGCGAGGTGTTTCTGGCCGGCGACGACGGCGTCTATCTCGGCCGCATCTGCCA
CTATCGCGAATGCCACACGCGCATGCTGTGTCGCGCACAGCATTGCGGCGCCCGCAATCATCTCAACGACGATCTGCACG
ACGTCACGCTGTCGCCGCAACTGATCGCCGAGCCGCCGCTGGAGTTGTGGCCGAAACTGATCCGCCGCACCGAATTGCCG
GCCGATGTCGAGGCGATCCTGATCGCCGAGCTGCCGCGATAG

Upstream 100 bases:

>100_bases
TAACCCGCCCTACGGTCCAGCTCACGCCAGAGAACCTGCTTTGCGTCCCGCCCTCCGCTCGCGCTACACATGAATATCCA
TCCCAGCCACCGCCCCGCTC

Downstream 100 bases:

>100_bases
CGAGCGTCGCCGGGAGCATAGCATGCCGGTCGCTGCGCGCCCTCACACCACCCGCAGCTGCGGCCGGACCCAGCCCTGGC
GCAGTTTCGCCGCCAGGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MRRRTRDYGPRPSTAAPRPVLLAAARDFVRAAAQIEGVRRIALIGSLVTDKPAPKDIDLLVTIDAAMDLDDLARTGRQMQ
GKANRVNLGGEVFLAGDDGVYLGRICHYRECHTRMLCRAQHCGARNHLNDDLHDVTLSPQLIAEPPLELWPKLIRRTELP
ADVEAILIAELPR

Sequences:

>Translated_173_residues
MRRRTRDYGPRPSTAAPRPVLLAAARDFVRAAAQIEGVRRIALIGSLVTDKPAPKDIDLLVTIDAAMDLDDLARTGRQMQ
GKANRVNLGGEVFLAGDDGVYLGRICHYRECHTRMLCRAQHCGARNHLNDDLHDVTLSPQLIAEPPLELWPKLIRRTELP
ADVEAILIAELPR
>Mature_173_residues
MRRRTRDYGPRPSTAAPRPVLLAAARDFVRAAAQIEGVRRIALIGSLVTDKPAPKDIDLLVTIDAAMDLDDLARTGRQMQ
GKANRVNLGGEVFLAGDDGVYLGRICHYRECHTRMLCRAQHCGARNHLNDDLHDVTLSPQLIAEPPLELWPKLIRRTELP
ADVEAILIAELPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19229; Mature: 19229

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRTRDYGPRPSTAAPRPVLLAAARDFVRAAAQIEGVRRIALIGSLVTDKPAPKDIDLL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
VTIDAAMDLDDLARTGRQMQGKANRVNLGGEVFLAGDDGVYLGRICHYRECHTRMLCRAQ
EEECCCCCHHHHHHCCHHHCCCCCEEECCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHH
HCGARNHLNDDLHDVTLSPQLIAEPPLELWPKLIRRTELPADVEAILIAELPR
HCCCCCCCCCCCCEEECCCHHCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MRRRTRDYGPRPSTAAPRPVLLAAARDFVRAAAQIEGVRRIALIGSLVTDKPAPKDIDLL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
VTIDAAMDLDDLARTGRQMQGKANRVNLGGEVFLAGDDGVYLGRICHYRECHTRMLCRAQ
EEECCCCCHHHHHHCCHHHCCCCCEEECCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHH
HCGARNHLNDDLHDVTLSPQLIAEPPLELWPKLIRRTELPADVEAILIAELPR
HCCCCCCCCCCCCEEECCCHHCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA