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The map label for this gene is yeaX [H]

Identifier: 86749029

GI number: 86749029

Start: 2179018

End: 2180010

Strand: Reverse

Name: yeaX [H]

Synonym: RPB_1906

Alternate gene names: 86749029

Gene position: 2180010-2179018 (Counterclockwise)

Preceding gene: 86749030

Following gene: 86749024

Centisome position: 40.89

GC content: 69.49

Gene sequence:

>993_bases
ATGCGCTTCGCCGAACACTGGAGTTTCGCAACCGTCATGGCGACGCGCGATCTTGCCCCGACCATCCGCGAGATCGTGCT
GAAGCCGGATGCGCCGGTCGGCACCTGGCCGCCGGGCAGCCACATCAACATCGCCGTGCTGGTGGACGGGCGGCCGCAGC
GACGCAGCTACTCGTTGGTGCCATCCATGGTCGAGGGCACGCTAAGGATCGCCGTCCGGCTTGCCGACGACAGCCGCGGC
GGCTCGCGCGCAATGTGGGCGCTGCAGGCGGGCCAGCGGCTGGAGATCACCAACCCGACATCGCTGTTCGAGATCGACTG
GAGCCGCAACACCTACTGCCTGATCGCCGGCGGCATCGGCGTCACGCCGATGCTCGGCATCGCCGCCGCGCTGGCGCGCA
AGGGCCTCGATCCGATCGTGCACTACGCGGTGAAATCGCGAGCCGACGCCGCGTTGCATGAGGAACTCGCCGACCTGCTG
GGCGACCGGCTGTTGCTGCACGCTGCGGATGTCGGGAAGCGGCTCGATCTGGACGCCACCTTCCGCGCCCTCCCCGCCGA
TGCGATCGCCGTTGTGTGCGGCCCGTTGCGGATGCTGGACGCGGCGCGGCAGGCCTGGCGAGACGCCGGCCGGCGCCCGA
CCGACCTGTGCTTCGAGACGTTCGGCTCCAGCGGCCGGCTGCCGACCAGCGACTTCCGCGTGCGGATCGCCTCGACCGGC
AATGAGATCATGGTGCCGCGCGACCGCTCGATGCTCGACGCCCTGAACGCCGCCGGCTACGAGGTGATCTCGGACTGCCA
GCGCGGCGAATGCGGCGTCTGCGCCGTCGACGTCACCACCGTCGAGGGCGAGATCGACCATCGCGACGTGTTCTTCAGCG
CGCATGAAAAGCAGACCAGCGCCAAGATGTGTGCCTGCGTGTCACGCGCCCGCGGCACGGTGACGGTGGATACGCTGTAC
CGGCCGGATCAGTTGCCCGGTGCGGCGGCGTAG

Upstream 100 bases:

>100_bases
TACGCAATCTGCGGCTGGCGCTGCGCAACCGCACGCATCTCGACCTGCTGCCGGCGCTGGCGCTGGCGACGGCGTCGGTC
GACAAGTAACGGAGGCCCGC

Downstream 100 bases:

>100_bases
CAGCGCATCTCTCGCGTCATTGCGAGGAGGCGAAGCCGACGAAGCAATCCAGGAGCCCCGTGCTTGGAGCCCCTGGATTG
CTTCGCCTTCGGCTTGCAAT

Product: vanillate O-demethylase oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MRFAEHWSFATVMATRDLAPTIREIVLKPDAPVGTWPPGSHINIAVLVDGRPQRRSYSLVPSMVEGTLRIAVRLADDSRG
GSRAMWALQAGQRLEITNPTSLFEIDWSRNTYCLIAGGIGVTPMLGIAAALARKGLDPIVHYAVKSRADAALHEELADLL
GDRLLLHAADVGKRLDLDATFRALPADAIAVVCGPLRMLDAARQAWRDAGRRPTDLCFETFGSSGRLPTSDFRVRIASTG
NEIMVPRDRSMLDALNAAGYEVISDCQRGECGVCAVDVTTVEGEIDHRDVFFSAHEKQTSAKMCACVSRARGTVTVDTLY
RPDQLPGAAA

Sequences:

>Translated_330_residues
MRFAEHWSFATVMATRDLAPTIREIVLKPDAPVGTWPPGSHINIAVLVDGRPQRRSYSLVPSMVEGTLRIAVRLADDSRG
GSRAMWALQAGQRLEITNPTSLFEIDWSRNTYCLIAGGIGVTPMLGIAAALARKGLDPIVHYAVKSRADAALHEELADLL
GDRLLLHAADVGKRLDLDATFRALPADAIAVVCGPLRMLDAARQAWRDAGRRPTDLCFETFGSSGRLPTSDFRVRIASTG
NEIMVPRDRSMLDALNAAGYEVISDCQRGECGVCAVDVTTVEGEIDHRDVFFSAHEKQTSAKMCACVSRARGTVTVDTLY
RPDQLPGAAA
>Mature_330_residues
MRFAEHWSFATVMATRDLAPTIREIVLKPDAPVGTWPPGSHINIAVLVDGRPQRRSYSLVPSMVEGTLRIAVRLADDSRG
GSRAMWALQAGQRLEITNPTSLFEIDWSRNTYCLIAGGIGVTPMLGIAAALARKGLDPIVHYAVKSRADAALHEELADLL
GDRLLLHAADVGKRLDLDATFRALPADAIAVVCGPLRMLDAARQAWRDAGRRPTDLCFETFGSSGRLPTSDFRVRIASTG
NEIMVPRDRSMLDALNAAGYEVISDCQRGECGVCAVDVTTVEGEIDHRDVFFSAHEKQTSAKMCACVSRARGTVTVDTLY
RPDQLPGAAA

Specific function: Unknown

COG id: COG1018

COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788104, Length=287, Percent_Identity=33.1010452961672, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1787658, Length=300, Percent_Identity=27, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR000951
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35768; Mature: 35768

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFAEHWSFATVMATRDLAPTIREIVLKPDAPVGTWPPGSHINIAVLVDGRPQRRSYSLV
CCCHHHCCEEEEEEHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHC
PSMVEGTLRIAVRLADDSRGGSRAMWALQAGQRLEITNPTSLFEIDWSRNTYCLIAGGIG
HHHHCCEEEEEEEEECCCCCCCCEEEEECCCCEEEECCCCEEEEEECCCCEEEEEECCCC
VTPMLGIAAALARKGLDPIVHYAVKSRADAALHEELADLLGDRLLLHAADVGKRLDLDAT
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHCCCCCCCCCHH
FRALPADAIAVVCGPLRMLDAARQAWRDAGRRPTDLCFETFGSSGRLPTSDFRVRIASTG
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCC
NEIMVPRDRSMLDALNAAGYEVISDCQRGECGVCAVDVTTVEGEIDHRDVFFSAHEKQTS
CEEEECCCHHHHHHHHHCCHHHHHHCCCCCCCEEEEEEEEECCCCCCCEEEEECHHHHHH
AKMCACVSRARGTVTVDTLYRPDQLPGAAA
HHHHHHHHHCCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MRFAEHWSFATVMATRDLAPTIREIVLKPDAPVGTWPPGSHINIAVLVDGRPQRRSYSLV
CCCHHHCCEEEEEEHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHC
PSMVEGTLRIAVRLADDSRGGSRAMWALQAGQRLEITNPTSLFEIDWSRNTYCLIAGGIG
HHHHCCEEEEEEEEECCCCCCCCEEEEECCCCEEEECCCCEEEEEECCCCEEEEEECCCC
VTPMLGIAAALARKGLDPIVHYAVKSRADAALHEELADLLGDRLLLHAADVGKRLDLDAT
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHCCCCCCCCCHH
FRALPADAIAVVCGPLRMLDAARQAWRDAGRRPTDLCFETFGSSGRLPTSDFRVRIASTG
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCC
NEIMVPRDRSMLDALNAAGYEVISDCQRGECGVCAVDVTTVEGEIDHRDVFFSAHEKQTS
CEEEECCCHHHHHHHHHCCHHHHHHCCCCCCCEEEEEEEEECCCCCCCEEEEECHHHHHH
AKMCACVSRARGTVTVDTLYRPDQLPGAAA
HHHHHHHHHCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FMN. [C]

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]