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The map label for this gene is 86749024

Identifier: 86749024

GI number: 86749024

Start: 2175881

End: 2176162

Strand: Reverse

Name: 86749024

Synonym: RPB_1901

Alternate gene names: NA

Gene position: 2176162-2175881 (Counterclockwise)

Preceding gene: 86749029

Following gene: 86749017

Centisome position: 40.82

GC content: 67.73

Gene sequence:

>282_bases
ATGCAGGACCCAGGCGTCGAAGAGTGCTTCGTCTATGTGCTCGGCTGTGCCGGCCCGAACCGCTATCTGACCTATGTCGG
CTGGACGCTCGATCTCGACCGCCGATTGTCGCAGCACAACGCCGGCACAGGCGCGCGATCGACCCGCGGCCGACGTTGGG
TGCTGATCCACAGCGAGCGCTTCACCAGCCGCCGCGAGGCGATGAGCCGCGAATGGCATCTGAAGCGCGACCGCGCCTTC
CGCCGCAGCCTGGCCGCCAAGGCGCGAGGCCTGAAAGGCTGA

Upstream 100 bases:

>100_bases
CATCCTTGATCGAACCAGCAAGCGGGTTCGGCACGCGGCTGTCAACGCGCCGAGGCCGCGGCGGATTGCCGGACTCACCG
CTGCGTGCAAGTTTCGCCCG

Downstream 100 bases:

>100_bases
AGCCCAGGCGCCGGACGGACGCGCTGTGCCGGTTTGCGACAGGATTACTGACCCGTCTTAACGTTTGGAACGCGGCCGGA
ACGGATCATGGCCGAATCAC

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MQDPGVEECFVYVLGCAGPNRYLTYVGWTLDLDRRLSQHNAGTGARSTRGRRWVLIHSERFTSRREAMSREWHLKRDRAF
RRSLAAKARGLKG

Sequences:

>Translated_93_residues
MQDPGVEECFVYVLGCAGPNRYLTYVGWTLDLDRRLSQHNAGTGARSTRGRRWVLIHSERFTSRREAMSREWHLKRDRAF
RRSLAAKARGLKG
>Mature_93_residues
MQDPGVEECFVYVLGCAGPNRYLTYVGWTLDLDRRLSQHNAGTGARSTRGRRWVLIHSERFTSRREAMSREWHLKRDRAF
RRSLAAKARGLKG

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 10793; Mature: 10793

Theoretical pI: Translated: 11.54; Mature: 11.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDPGVEECFVYVLGCAGPNRYLTYVGWTLDLDRRLSQHNAGTGARSTRGRRWVLIHSER
CCCCCHHHHHHHHHCCCCCCCEEEEEEEEECHHHHHHHCCCCCCCCCCCCCEEEEEECCH
FTSRREAMSREWHLKRDRAFRRSLAAKARGLKG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQDPGVEECFVYVLGCAGPNRYLTYVGWTLDLDRRLSQHNAGTGARSTRGRRWVLIHSER
CCCCCHHHHHHHHHCCCCCCCEEEEEEEEECHHHHHHHCCCCCCCCCCCCCEEEEEECCH
FTSRREAMSREWHLKRDRAFRRSLAAKARGLKG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA