| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is nasA [H]
Identifier: 86748875
GI number: 86748875
Start: 2002749
End: 2005442
Strand: Reverse
Name: nasA [H]
Synonym: RPB_1752
Alternate gene names: 86748875
Gene position: 2005442-2002749 (Counterclockwise)
Preceding gene: 86748876
Following gene: 86748868
Centisome position: 37.61
GC content: 69.52
Gene sequence:
>2694_bases ATGAACGCACCGACGCAACACCCGCCCGCGGTGCGCACCACCTGCGCCTATTGCGGCGTCGGCTGCGGCGTGCTCGCCAA GCCCGATGGACGAGGCGGCGCAGCAATCACCGGCGATCCGGAGCATCCGGCGAATTTCGGCCGGCTGTGCTCGAAGGGCT CGGCGCTCGGCGAAACGCTGGCGCTCGACACAAGGCTGCTGCATCCGATGCGACGCGGCGCCGACAGCGCAATGGCACGC ACGTCCTGGGATGATGCGCTGGACACGGTTGCGAACGGCTTTGCGGATGTCATCGCCAAGCACGGCCCGGACTCGGTCGC GTTCTATCTGTCGGGCCAATTGCTCACCGAGGATTACTACGTCGCAAACAAGCTGATGAAGGGTTTTGTCGGCTCGGCCA ATGTCGACACCAATTCGCGACTGTGCATGGCCTCCTCGGTCGCCGGCCATCGCCGCGCTTTCGGCAGCGACACCGTGCCG GGGACCTACGCCGATCTCGATCAGGCCGACCTGATCGTGCTGGTCGGCTCCAACGCCGCCTGGTGCCATCCGGTGCTGTA TCAGCGCATCATCGCCAACAAGCGCGCGCGCGGTGCGACAATCGTGGTGATTGATCCGCGCCGCACCGCGAGCGTCGAGG ACGACGATTTGCACCTGCCGGTCGCGCCCGGCATGGACACCGTGCTGTTCAGCGGCTTGCTCGTACATCTCGCCGATACG CTGGCGCTCGACGACGCCTATCTCGAGGCCCACACCACCGGCCTCACCGAGGCGCTGGTGCGCGCTCGGGAGATCGCGCC GGACATCGCCGCGACGGCGGCTATGACGGGCGTCGACGCGGCCGACATCGCGCGCTTCTTCGCGCTGTTCCGCGCCACAG AGCGCGTCGTGACCTGTTATTCGCAAGGCGTCAATCAGTCGGCGCAAGGCACCGACAAGGTCAACGCCATCATCAACTGC CATCTCTCCACCGGGCGGATCGGCCGGCCCGGCATGGGGCCGTTCTCGCTCACCGGGCAGCCCAACGCGATGGGCGGTCG CGAGGTCGGCGGCCTCGCCAATCAGCTCGCCGCGCATATGGGCTTCGACGCCGAGGCGATCGATCGCGTCGGCCGGTTCT GGCGCGCGCCGAACATGGCGCGGCGCGAAGGGCTGAAGGCGGTGCAATTGTTCGAGGCGATCGACCGCGGCGAGATCAAG GCGCTGTGGATCATGGCCACCAACCCGGCAGTGTCGCTGCCCCGCGCCGACGTCGTGCAGGAGGCGCTGCGGAAGCTAGA CCTCTTGGTGATCTCCGAGAACGTGATCAGCAACGACACCGTCGCCGCCGGCGCGCATGTGCTGCTGCCGGCGGCCGCTT GGGGCGAGAAGGACGGCACCGTCACCAATTCGGAACGCCGGATCTCGCGGCAACGGGCGTTCCTGCCGCTGCCGGGCGAG GCGAAGCCGGATTGGTGGAGCGTCGCGCAGGTCGCGCAGCGCATGGGATTCGGCGACGCTTTCGCTTATCACTCGGCCGC GCAGGTGTTTCGCGAGCACGCCGCACTCTCGGCTTTCGAGAACGACGGCCGCCGCGATTTCGACATCGGCGCGTTGGCCG ACCTCAGTGACGAGGCCTTCAACGCGCTCGATCCGGTGCAATGGCCGGCGCGCGCGGGCAAGCCTGCGACCGACACGCGA TTCTTCGCCGACGGGCATTTCTTCACGCCCGATGGTCGCGCGCGGCTGATCGCGCCGGCGATGCCAGCCTTGCACGAAGC GCCCTCGCCCGCGTTCCCGCTGCTGCTCAACACCGGCCGCGTTCGCGACCAGTGGCACACCATGACTCGCAGCGGCCTCA GCCCGCGGCTCGGCGCGCATCTGCCGGAGCCGTTCGTCGAGCTGCATCCGGACGATGCGGCAGCGGCCGGCTTGAAGGAC GGCGGCTTCGCGCGCATCACGACGACGCACGGCGCTTGCATCCTCAAGGTGATCGTCAGTGCCGGTCAACGCCGCGGCTC GCTGTTCGCGCCGATCCATTGGAGCGGCGAGACCGCGGCGACGGCGCGCGTCGGCGCGCTGGTGGCGCCGGTCACCGATC CGTTCTCGGGTCAGCCGGAAGCCAAGGCGACGCCGGCCGCGATCGCGCGAGTCGACTACGCGCTGCGCGGCTTCGTGCTG TCGCGGCAACCGCTGACGCTGTCCGGGGACGATTGGTGGGCACGCGTCGCGGTGCGCAACGGCGCGGGCCTGCTGATCGC GAGCGACGAACCCGCCTCCGCGTGGCGCGGTCGCGCCGCGACGCTGTTCGGCGACGGCGTCGAGCTCGCCGAGTATCTCG ACGCACCGCGCCAGAGTTTTCGCGCGGCGGCGTTCGAGAACGGTCGGCTGATCGGCTGCCTGTTCGTCGGCCCGGCCGAG GCGACGCCGACATGGGACGCGGTGAAGACGCTGTTCGAGGCTGACGCGCTGCCCGATCGGCAGCGCCGCGCCGTGCTGTC CGGCCGCTCCACCGACGGCGTCGCCGACACCGGACCGATCGTCTGCGCCTGCTTCGGCGTCGGCCTCACCAGCATCCGCG ACGCGATCGAGAGCGCCGCCGCGATCAGCGTCGACGACATCGGCAGGCACCTGCGCGCCGGCACCAATTGCGGCTCGTGC CTGCCGGAGCTGCGCAAGATCGTGGCGGGGGCGAAGGTGGGCGAGACGGTCTGA
Upstream 100 bases:
>100_bases TCGACATCGTCGCGCAGCACGGCGCGCGCACGCCGGCGGAGGCCACCGCCTTCGTCTCCGAGCTGAAGAAGCAGGGCCGC TACCAGCAGGACGTGTATTG
Downstream 100 bases:
>100_bases TGAACTAACAACTTGCGCCGGCCTGCTCCCTCGCCCCGCTCTTCGCGGGGAGAGGGGTGGGGTGAGGGGCGACGCGCACA CGGAGGCTCGGCTGCGCGGA
Product: molybdopterin oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 897; Mature: 897
Protein sequence:
>897_residues MNAPTQHPPAVRTTCAYCGVGCGVLAKPDGRGGAAITGDPEHPANFGRLCSKGSALGETLALDTRLLHPMRRGADSAMAR TSWDDALDTVANGFADVIAKHGPDSVAFYLSGQLLTEDYYVANKLMKGFVGSANVDTNSRLCMASSVAGHRRAFGSDTVP GTYADLDQADLIVLVGSNAAWCHPVLYQRIIANKRARGATIVVIDPRRTASVEDDDLHLPVAPGMDTVLFSGLLVHLADT LALDDAYLEAHTTGLTEALVRAREIAPDIAATAAMTGVDAADIARFFALFRATERVVTCYSQGVNQSAQGTDKVNAIINC HLSTGRIGRPGMGPFSLTGQPNAMGGREVGGLANQLAAHMGFDAEAIDRVGRFWRAPNMARREGLKAVQLFEAIDRGEIK ALWIMATNPAVSLPRADVVQEALRKLDLLVISENVISNDTVAAGAHVLLPAAAWGEKDGTVTNSERRISRQRAFLPLPGE AKPDWWSVAQVAQRMGFGDAFAYHSAAQVFREHAALSAFENDGRRDFDIGALADLSDEAFNALDPVQWPARAGKPATDTR FFADGHFFTPDGRARLIAPAMPALHEAPSPAFPLLLNTGRVRDQWHTMTRSGLSPRLGAHLPEPFVELHPDDAAAAGLKD GGFARITTTHGACILKVIVSAGQRRGSLFAPIHWSGETAATARVGALVAPVTDPFSGQPEAKATPAAIARVDYALRGFVL SRQPLTLSGDDWWARVAVRNGAGLLIASDEPASAWRGRAATLFGDGVELAEYLDAPRQSFRAAAFENGRLIGCLFVGPAE ATPTWDAVKTLFEADALPDRQRRAVLSGRSTDGVADTGPIVCACFGVGLTSIRDAIESAAAISVDDIGRHLRAGTNCGSC LPELRKIVAGAKVGETV
Sequences:
>Translated_897_residues MNAPTQHPPAVRTTCAYCGVGCGVLAKPDGRGGAAITGDPEHPANFGRLCSKGSALGETLALDTRLLHPMRRGADSAMAR TSWDDALDTVANGFADVIAKHGPDSVAFYLSGQLLTEDYYVANKLMKGFVGSANVDTNSRLCMASSVAGHRRAFGSDTVP GTYADLDQADLIVLVGSNAAWCHPVLYQRIIANKRARGATIVVIDPRRTASVEDDDLHLPVAPGMDTVLFSGLLVHLADT LALDDAYLEAHTTGLTEALVRAREIAPDIAATAAMTGVDAADIARFFALFRATERVVTCYSQGVNQSAQGTDKVNAIINC HLSTGRIGRPGMGPFSLTGQPNAMGGREVGGLANQLAAHMGFDAEAIDRVGRFWRAPNMARREGLKAVQLFEAIDRGEIK ALWIMATNPAVSLPRADVVQEALRKLDLLVISENVISNDTVAAGAHVLLPAAAWGEKDGTVTNSERRISRQRAFLPLPGE AKPDWWSVAQVAQRMGFGDAFAYHSAAQVFREHAALSAFENDGRRDFDIGALADLSDEAFNALDPVQWPARAGKPATDTR FFADGHFFTPDGRARLIAPAMPALHEAPSPAFPLLLNTGRVRDQWHTMTRSGLSPRLGAHLPEPFVELHPDDAAAAGLKD GGFARITTTHGACILKVIVSAGQRRGSLFAPIHWSGETAATARVGALVAPVTDPFSGQPEAKATPAAIARVDYALRGFVL SRQPLTLSGDDWWARVAVRNGAGLLIASDEPASAWRGRAATLFGDGVELAEYLDAPRQSFRAAAFENGRLIGCLFVGPAE ATPTWDAVKTLFEADALPDRQRRAVLSGRSTDGVADTGPIVCACFGVGLTSIRDAIESAAAISVDDIGRHLRAGTNCGSC LPELRKIVAGAKVGETV >Mature_897_residues MNAPTQHPPAVRTTCAYCGVGCGVLAKPDGRGGAAITGDPEHPANFGRLCSKGSALGETLALDTRLLHPMRRGADSAMAR TSWDDALDTVANGFADVIAKHGPDSVAFYLSGQLLTEDYYVANKLMKGFVGSANVDTNSRLCMASSVAGHRRAFGSDTVP GTYADLDQADLIVLVGSNAAWCHPVLYQRIIANKRARGATIVVIDPRRTASVEDDDLHLPVAPGMDTVLFSGLLVHLADT LALDDAYLEAHTTGLTEALVRAREIAPDIAATAAMTGVDAADIARFFALFRATERVVTCYSQGVNQSAQGTDKVNAIINC HLSTGRIGRPGMGPFSLTGQPNAMGGREVGGLANQLAAHMGFDAEAIDRVGRFWRAPNMARREGLKAVQLFEAIDRGEIK ALWIMATNPAVSLPRADVVQEALRKLDLLVISENVISNDTVAAGAHVLLPAAAWGEKDGTVTNSERRISRQRAFLPLPGE AKPDWWSVAQVAQRMGFGDAFAYHSAAQVFREHAALSAFENDGRRDFDIGALADLSDEAFNALDPVQWPARAGKPATDTR FFADGHFFTPDGRARLIAPAMPALHEAPSPAFPLLLNTGRVRDQWHTMTRSGLSPRLGAHLPEPFVELHPDDAAAAGLKD GGFARITTTHGACILKVIVSAGQRRGSLFAPIHWSGETAATARVGALVAPVTDPFSGQPEAKATPAAIARVDYALRGFVL SRQPLTLSGDDWWARVAVRNGAGLLIASDEPASAWRGRAATLFGDGVELAEYLDAPRQSFRAAAFENGRLIGCLFVGPAE ATPTWDAVKTLFEADALPDRQRRAVLSGRSTDGVADTGPIVCACFGVGLTSIRDAIESAAAISVDDIGRHLRAGTNCGSC LPELRKIVAGAKVGETV
Specific function: Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/napA/narB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788534, Length=798, Percent_Identity=28.0701754385965, Blast_Score=286, Evalue=4e-78, Organism=Escherichia coli, GI3868721, Length=701, Percent_Identity=25.3922967189729, Blast_Score=236, Evalue=7e-63, Organism=Escherichia coli, GI3868720, Length=605, Percent_Identity=23.801652892562, Blast_Score=145, Evalue=8e-36, Organism=Escherichia coli, GI3868719, Length=605, Percent_Identity=23.4710743801653, Blast_Score=143, Evalue=4e-35, Organism=Escherichia coli, GI1787778, Length=593, Percent_Identity=25.6323777403035, Blast_Score=116, Evalue=7e-27, Organism=Escherichia coli, GI1787870, Length=503, Percent_Identity=22.6640159045726, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI87081797, Length=679, Percent_Identity=21.6494845360825, Blast_Score=70, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR007419 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 [H]
Pfam domain/function: PF04324 Fer2_BFD; PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: =1.7.99.4 [H]
Molecular weight: Translated: 95093; Mature: 95093
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPTQHPPAVRTTCAYCGVGCGVLAKPDGRGGAAITGDPEHPANFGRLCSKGSALGETL CCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCEECCCCCCCHHHHHHHHCCCHHHHHH ALDTRLLHPMRRGADSAMARTSWDDALDTVANGFADVIAKHGPDSVAFYLSGQLLTEDYY HHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEECHHHH VANKLMKGFVGSANVDTNSRLCMASSVAGHRRAFGSDTVPGTYADLDQADLIVLVGSNAA HHHHHHHHHCCCCCCCCCCCEEEEHHCCHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCC WCHPVLYQRIIANKRARGATIVVIDPRRTASVEDDDLHLPVAPGMDTVLFSGLLVHLADT HHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHH LALDDAYLEAHTTGLTEALVRAREIAPDIAATAAMTGVDAADIARFFALFRATERVVTCY HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH SQGVNQSAQGTDKVNAIINCHLSTGRIGRPGMGPFSLTGQPNAMGGREVGGLANQLAAHM HHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHC GFDAEAIDRVGRFWRAPNMARREGLKAVQLFEAIDRGEIKALWIMATNPAVSLPRADVVQ CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHH EALRKLDLLVISENVISNDTVAAGAHVLLPAAAWGEKDGTVTNSERRISRQRAFLPLPGE HHHHHHHEEEEECCCCCCCCHHCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHCCCCCCCC AKPDWWSVAQVAQRMGFGDAFAYHSAAQVFREHAALSAFENDGRRDFDIGALADLSDEAF CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHH NALDPVQWPARAGKPATDTRFFADGHFFTPDGRARLIAPAMPALHEAPSPAFPLLLNTGR HCCCCCCCCHHCCCCCCCCEEEECCCEECCCCCCEEECCCCHHHHCCCCCCCCEEECCCC VRDQWHTMTRSGLSPRLGAHLPEPFVELHPDDAAAAGLKDGGFARITTTHGACILKVIVS CHHHHHHHHHCCCCCCCCCCCCCCHHEECCCCHHHCCCCCCCEEEEEECCCHHHHHHHHH AGQRRGSLFAPIHWSGETAATARVGALVAPVTDPFSGQPEAKATPAAIARVDYALRGFVL CCCCCCCEEEEEEECCCCHHHHHHCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHEE SRQPLTLSGDDWWARVAVRNGAGLLIASDEPASAWRGRAATLFGDGVELAEYLDAPRQSF CCCCCEECCCCEEEEEEEECCCEEEEECCCCHHHHCCCEEEEECCCHHHHHHHCCHHHHH RAAAFENGRLIGCLFVGPAEATPTWDAVKTLFEADALPDRQRRAVLSGRSTDGVADTGPI HHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCH VCACFGVGLTSIRDAIESAAAISVDDIGRHLRAGTNCGSCLPELRKIVAGAKVGETV HHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNAPTQHPPAVRTTCAYCGVGCGVLAKPDGRGGAAITGDPEHPANFGRLCSKGSALGETL CCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCEECCCCCCCHHHHHHHHCCCHHHHHH ALDTRLLHPMRRGADSAMARTSWDDALDTVANGFADVIAKHGPDSVAFYLSGQLLTEDYY HHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEECHHHH VANKLMKGFVGSANVDTNSRLCMASSVAGHRRAFGSDTVPGTYADLDQADLIVLVGSNAA HHHHHHHHHCCCCCCCCCCCEEEEHHCCHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCC WCHPVLYQRIIANKRARGATIVVIDPRRTASVEDDDLHLPVAPGMDTVLFSGLLVHLADT HHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHH LALDDAYLEAHTTGLTEALVRAREIAPDIAATAAMTGVDAADIARFFALFRATERVVTCY HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH SQGVNQSAQGTDKVNAIINCHLSTGRIGRPGMGPFSLTGQPNAMGGREVGGLANQLAAHM HHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHC GFDAEAIDRVGRFWRAPNMARREGLKAVQLFEAIDRGEIKALWIMATNPAVSLPRADVVQ CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHH EALRKLDLLVISENVISNDTVAAGAHVLLPAAAWGEKDGTVTNSERRISRQRAFLPLPGE HHHHHHHEEEEECCCCCCCCHHCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHCCCCCCCC AKPDWWSVAQVAQRMGFGDAFAYHSAAQVFREHAALSAFENDGRRDFDIGALADLSDEAF CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHH NALDPVQWPARAGKPATDTRFFADGHFFTPDGRARLIAPAMPALHEAPSPAFPLLLNTGR HCCCCCCCCHHCCCCCCCCEEEECCCEECCCCCCEEECCCCHHHHCCCCCCCCEEECCCC VRDQWHTMTRSGLSPRLGAHLPEPFVELHPDDAAAAGLKDGGFARITTTHGACILKVIVS CHHHHHHHHHCCCCCCCCCCCCCCHHEECCCCHHHCCCCCCCEEEEEECCCHHHHHHHHH AGQRRGSLFAPIHWSGETAATARVGALVAPVTDPFSGQPEAKATPAAIARVDYALRGFVL CCCCCCCEEEEEEECCCCHHHHHHCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHEE SRQPLTLSGDDWWARVAVRNGAGLLIASDEPASAWRGRAATLFGDGVELAEYLDAPRQSF CCCCCEECCCCEEEEEEEECCCEEEEECCCCHHHHCCCEEEEECCCHHHHHHHCCHHHHH RAAAFENGRLIGCLFVGPAEATPTWDAVKTLFEADALPDRQRRAVLSGRSTDGVADTGPI HHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCH VCACFGVGLTSIRDAIESAAAISVDDIGRHLRAGTNCGSCLPELRKIVAGAKVGETV HHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8468296 [H]