Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86748797
Identifier: 86748797
GI number: 86748797
Start: 1905520
End: 1905963
Strand: Reverse
Name: 86748797
Synonym: RPB_1674
Alternate gene names: NA
Gene position: 1905963-1905520 (Counterclockwise)
Preceding gene: 86748798
Following gene: 86748790
Centisome position: 35.75
GC content: 68.92
Gene sequence:
>444_bases ATGACGACCCGAACCGCTCTCGTTGCCGCTGTGCTGTTCGCTGCGCTGGCGCCCGCCGCAGCCAATGCGCAATCGGCATC CGGTCCACAAGGTACCTGGCTGACGCAGGCCGGCGACGCCAGGGTGCGGATCAAGAGCTGCGGCGCGGCGCTGTGCGGCA GCATCGTCTGGCTGAAGCAGCCGATCGATCCGAACACCGGCAATCCGCAAGTCGACGACAAGAACCCCGACCCCGCCCGC GCCGCGCGGCCGGTGCTCGGGCTGCAGATCTTCGGCGACATGCGACCGGTGTCCCAGGGCAAATGGTCGGGCCACATCTA CAACGCCGACGACGGCAAGACCTATCAGAGCAGCATCTCGCACACCGGGCCGACGACGCTGTACGTCGAGGGCTGCGTCG GCACGCTGTGCGGCGGCGAGACCTGGACGCTCGCCGGCCGCTGA
Upstream 100 bases:
>100_bases GCGGCGGCCATACCTTTGGCGCGAATCTCGTGCTCTGCTATTCAACGCGTTGCGACGCAGCAGATTTGGCGCGGCGCCGA ACGATCTTTCTGGAGGACGT
Downstream 100 bases:
>100_bases GCGGCCCCCCTGCCGTCAGGCCTGCATGGCTTTCAGCGTGATCGCCGCGGAGGCATAGCCGCCGCCGGCGCCGTCGATGA AATGCACATGATCGCTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MTTRTALVAAVLFAALAPAAANAQSASGPQGTWLTQAGDARVRIKSCGAALCGSIVWLKQPIDPNTGNPQVDDKNPDPAR AARPVLGLQIFGDMRPVSQGKWSGHIYNADDGKTYQSSISHTGPTTLYVEGCVGTLCGGETWTLAGR
Sequences:
>Translated_147_residues MTTRTALVAAVLFAALAPAAANAQSASGPQGTWLTQAGDARVRIKSCGAALCGSIVWLKQPIDPNTGNPQVDDKNPDPAR AARPVLGLQIFGDMRPVSQGKWSGHIYNADDGKTYQSSISHTGPTTLYVEGCVGTLCGGETWTLAGR >Mature_146_residues TTRTALVAAVLFAALAPAAANAQSASGPQGTWLTQAGDARVRIKSCGAALCGSIVWLKQPIDPNTGNPQVDDKNPDPARA ARPVLGLQIFGDMRPVSQGKWSGHIYNADDGKTYQSSISHTGPTTLYVEGCVGTLCGGETWTLAGR
Specific function: Unknown
COG id: COG4731
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15281; Mature: 15150
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRTALVAAVLFAALAPAAANAQSASGPQGTWLTQAGDARVRIKSCGAALCGSIVWLKQ CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCEEEEEHHCHHHHCCEEEEEC PIDPNTGNPQVDDKNPDPARAARPVLGLQIFGDMRPVSQGKWSGHIYNADDGKTYQSSIS CCCCCCCCCCCCCCCCCHHHHHCCEEEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHCC HTGPTTLYVEGCVGTLCGGETWTLAGR CCCCEEEEECCCEEECCCCCEEEECCC >Mature Secondary Structure TTRTALVAAVLFAALAPAAANAQSASGPQGTWLTQAGDARVRIKSCGAALCGSIVWLKQ CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCEEEEEHHCHHHHCCEEEEEC PIDPNTGNPQVDDKNPDPARAARPVLGLQIFGDMRPVSQGKWSGHIYNADDGKTYQSSIS CCCCCCCCCCCCCCCCCHHHHHCCEEEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHCC HTGPTTLYVEGCVGTLCGGETWTLAGR CCCCEEEEECCCEEECCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA