Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is Hnr [H]
Identifier: 86748790
GI number: 86748790
Start: 1895835
End: 1897331
Strand: Reverse
Name: Hnr [H]
Synonym: RPB_1667
Alternate gene names: 86748790
Gene position: 1897331-1895835 (Counterclockwise)
Preceding gene: 86748797
Following gene: 86748789
Centisome position: 35.59
GC content: 66.8
Gene sequence:
>1497_bases ATGGCCGACGAAACCATTCCCGGGACGGACAAAGCGAGCGACGCCAAGATTCGCTGCGATGCCTGTCCGGTGATGTGCTA CATCAAGCCCGGCATGAGCGGCGCCTGCGATCGCTACGCCAATCACGACGGCGACCTGGTTCGCGTCGATCCGCACATCG TGCTCGATCGCGCGCTGGCGCACGGCGGTACCGTCGTTCCGTTTCACCGCGACGGCTCCTGGGACGGCCAACTGATCGCG CCGCCCGAGACCTTCGTCACCGCGATCGGCGCCGGCACGACCTATCCGGACTACAAGCCCGCGCCGTTCATCGTCTCCTC TGAAGTCGACGGCGTCGACATGGTCACGGTCGTCACCGAGGGCATCTTCAGTTATTGCGGCGTCAAGGTGAAGATCGACA CCGACCGCTTCCTCGGCCCCGAGCAATCCACGGTGCGCGCGTCGGGCGAAGCGGTAGGCCACGTCACCACCTCCGAATAC GGCTCGCAGATGCTGTCGCTCGGCGGCGTGCATCACCTCACCGGCGGCAGCAAGAAGGAAGGCCGCGTCACCTGCGAGGC CCTGCTCGATCTGTGCAACGGCAAGCCGGTCGAACTCACCATCGACGGCGGCTCGACCGTCGTCGTGCAGGCCGGGCAGC CTCCGATCGTCAACGGCGTCAAGGAAGAGCGGATGCGGGTCGGCTGCGGCTCCGCCACGATCGGCATGTTCGCCAAGCAA TGGCTCGGCCTCGTCGACGACGTGGTGGTGGTCGACGATCACATCACCGGCGTGCTGTCGGAACACCAGGCCGGCAAGGT GCTCGGCGTGCCCGACACCGGCATCAAGATCAAGGGCCGGCGTTCGACGCCCGGCCGCTACTTCCAGGTCGCCGAGCCCG GCACCGGCTGGGGCGGCACCAACATTTCCGATCCACTGTCGATCCTCGGCCCGTTCGACCGCAAGGTCGCCTGGCCCGGG CTGCGGCTGTACTTCATCTCGACCACCGGCGAACACGCGGCCTACTACGAACTCGACGAAACGCTCTCTCCCCGCCAGAA GGAGATGCCTGCGGAGCTCGCGGCCCTGTCGCAGCGCGTGAAGGACAATTGCGAGCCGGCGCTCTCCACCGTGCTGTTCA TGGCCGGCGCCGGCGGCTCGCTGCGCGCGGGCGTCACGGAAAATCCGGTGCGACTGACGCATTCGGTGAAGGACGCGCTG ACCTATGTCACCTGCGGCGGCGCGCCGGTCTATGTCTATCCCGGCGGCGGCATCACCCTGATGGTCGACGTCACCAAGAT GCCGGAGAACGCCTTCGGCTATGTGCCGACGCCCGCTCTCGTGGCGCCGATCGAGTTCACGCTGCGGCTGTCGGACTACG AAGAGCTCGGCGGTCACATGGCCGAGGTTCGGCCGGTGTCGTCGATCGCTCTGAACGACGGCCTGCAGACCGTGGGGCCT CATTCCGACAACCCGTGGCCGCTCGCTCCGAATGCGGCCAAGCGTTTCTTCGGCTGA
Upstream 100 bases:
>100_bases TGCTTGACTTGGATCGGGTCCCGCTTTTCATTAGTATACATACAAACTGCGACGGTCGACGCAATGTCGGACCGGCGAGC GGAGCGAAGAGCAGAGCCAC
Downstream 100 bases:
>100_bases TCGATGGCCGCCCCGCACCTCCTCACCCCGACCCGAGGACGCGCAGCGCAGGCGGCGATGCTGGCGGACGGCCGGCGCTT GCACTTACAGGACGGCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 498; Mature: 497
Protein sequence:
>498_residues MADETIPGTDKASDAKIRCDACPVMCYIKPGMSGACDRYANHDGDLVRVDPHIVLDRALAHGGTVVPFHRDGSWDGQLIA PPETFVTAIGAGTTYPDYKPAPFIVSSEVDGVDMVTVVTEGIFSYCGVKVKIDTDRFLGPEQSTVRASGEAVGHVTTSEY GSQMLSLGGVHHLTGGSKKEGRVTCEALLDLCNGKPVELTIDGGSTVVVQAGQPPIVNGVKEERMRVGCGSATIGMFAKQ WLGLVDDVVVVDDHITGVLSEHQAGKVLGVPDTGIKIKGRRSTPGRYFQVAEPGTGWGGTNISDPLSILGPFDRKVAWPG LRLYFISTTGEHAAYYELDETLSPRQKEMPAELAALSQRVKDNCEPALSTVLFMAGAGGSLRAGVTENPVRLTHSVKDAL TYVTCGGAPVYVYPGGGITLMVDVTKMPENAFGYVPTPALVAPIEFTLRLSDYEELGGHMAEVRPVSSIALNDGLQTVGP HSDNPWPLAPNAAKRFFG
Sequences:
>Translated_498_residues MADETIPGTDKASDAKIRCDACPVMCYIKPGMSGACDRYANHDGDLVRVDPHIVLDRALAHGGTVVPFHRDGSWDGQLIA PPETFVTAIGAGTTYPDYKPAPFIVSSEVDGVDMVTVVTEGIFSYCGVKVKIDTDRFLGPEQSTVRASGEAVGHVTTSEY GSQMLSLGGVHHLTGGSKKEGRVTCEALLDLCNGKPVELTIDGGSTVVVQAGQPPIVNGVKEERMRVGCGSATIGMFAKQ WLGLVDDVVVVDDHITGVLSEHQAGKVLGVPDTGIKIKGRRSTPGRYFQVAEPGTGWGGTNISDPLSILGPFDRKVAWPG LRLYFISTTGEHAAYYELDETLSPRQKEMPAELAALSQRVKDNCEPALSTVLFMAGAGGSLRAGVTENPVRLTHSVKDAL TYVTCGGAPVYVYPGGGITLMVDVTKMPENAFGYVPTPALVAPIEFTLRLSDYEELGGHMAEVRPVSSIALNDGLQTVGP HSDNPWPLAPNAAKRFFG >Mature_497_residues ADETIPGTDKASDAKIRCDACPVMCYIKPGMSGACDRYANHDGDLVRVDPHIVLDRALAHGGTVVPFHRDGSWDGQLIAP PETFVTAIGAGTTYPDYKPAPFIVSSEVDGVDMVTVVTEGIFSYCGVKVKIDTDRFLGPEQSTVRASGEAVGHVTTSEYG SQMLSLGGVHHLTGGSKKEGRVTCEALLDLCNGKPVELTIDGGSTVVVQAGQPPIVNGVKEERMRVGCGSATIGMFAKQW LGLVDDVVVVDDHITGVLSEHQAGKVLGVPDTGIKIKGRRSTPGRYFQVAEPGTGWGGTNISDPLSILGPFDRKVAWPGL RLYFISTTGEHAAYYELDETLSPRQKEMPAELAALSQRVKDNCEPALSTVLFMAGAGGSLRAGVTENPVRLTHSVKDALT YVTCGGAPVYVYPGGGITLMVDVTKMPENAFGYVPTPALVAPIEFTLRLSDYEELGGHMAEVRPVSSIALNDGLQTVGPH SDNPWPLAPNAAKRFFG
Specific function: Catalyzes the reversible reduction of 6- hydroxynicotinate to 6-oxo-1,4,5,6-tetrahydronicotinate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 [H]
Pfam domain/function: PF00037 Fer4 [H]
EC number: =1.3.7.1 [H]
Molecular weight: Translated: 52841; Mature: 52709
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADETIPGTDKASDAKIRCDACPVMCYIKPGMSGACDRYANHDGDLVRVDPHIVLDRALA CCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHCCCCCCEEEECCHHHHHHHHH HGGTVVPFHRDGSWDGQLIAPPETFVTAIGAGTTYPDYKPAPFIVSSEVDGVDMVTVVTE CCCEEEEEECCCCCCCEEECCCHHHHEEECCCCCCCCCCCCCEEEECCCCCCEEHHHHHH GIFSYCGVKVKIDTDRFLGPEQSTVRASGEAVGHVTTSEYGSQMLSLGGVHHLTGGSKKE HHHHHCCEEEEECCHHCCCCCCHHEEECCCEEEEEEHHHHHHHHHHHCCEEECCCCCCCC GRVTCEALLDLCNGKPVELTIDGGSTVVVQAGQPPIVNGVKEERMRVGCGSATIGMFAKQ CCEEHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHEECCCCHHHHHHHHH WLGLVDDVVVVDDHITGVLSEHQAGKVLGVPDTGIKIKGRRSTPGRYFQVAEPGTGWGGT HHHHHCCEEEECCCHHHHHCCCCCCCEEECCCCCEEEEECCCCCCCEEEEECCCCCCCCC NISDPLSILGPFDRKVAWPGLRLYFISTTGEHAAYYELDETLSPRQKEMPAELAALSQRV CCCCCHHHCCCCCCCEECCCEEEEEEEECCCCEEEEEECCCCCCHHHHCCHHHHHHHHHH KDNCEPALSTVLFMAGAGGSLRAGVTENPVRLTHSVKDALTYVTCGGAPVYVYPGGGITL HCCCHHHHHHHHHEECCCCCEECCCCCCCEEEHHHHHHHEEEEEECCEEEEEECCCCEEE MVDVTKMPENAFGYVPTPALVAPIEFTLRLSDYEELGGHMAEVRPVSSIALNDGLQTVGP EEEEEECCCCCCCCCCCCCEEECEEEEEEECCHHHHCCCHHHCCCHHHEEECCCCCCCCC HSDNPWPLAPNAAKRFFG CCCCCCCCCCHHHHHCCC >Mature Secondary Structure ADETIPGTDKASDAKIRCDACPVMCYIKPGMSGACDRYANHDGDLVRVDPHIVLDRALA CCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHCCCCCCEEEECCHHHHHHHHH HGGTVVPFHRDGSWDGQLIAPPETFVTAIGAGTTYPDYKPAPFIVSSEVDGVDMVTVVTE CCCEEEEEECCCCCCCEEECCCHHHHEEECCCCCCCCCCCCCEEEECCCCCCEEHHHHHH GIFSYCGVKVKIDTDRFLGPEQSTVRASGEAVGHVTTSEYGSQMLSLGGVHHLTGGSKKE HHHHHCCEEEEECCHHCCCCCCHHEEECCCEEEEEEHHHHHHHHHHHCCEEECCCCCCCC GRVTCEALLDLCNGKPVELTIDGGSTVVVQAGQPPIVNGVKEERMRVGCGSATIGMFAKQ CCEEHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHEECCCCHHHHHHHHH WLGLVDDVVVVDDHITGVLSEHQAGKVLGVPDTGIKIKGRRSTPGRYFQVAEPGTGWGGT HHHHHCCEEEECCCHHHHHCCCCCCCEEECCCCCEEEEECCCCCCCEEEEECCCCCCCCC NISDPLSILGPFDRKVAWPGLRLYFISTTGEHAAYYELDETLSPRQKEMPAELAALSQRV CCCCCHHHCCCCCCCEECCCEEEEEEEECCCCEEEEEECCCCCCHHHHCCHHHHHHHHHH KDNCEPALSTVLFMAGAGGSLRAGVTENPVRLTHSVKDALTYVTCGGAPVYVYPGGGITL HCCCHHHHHHHHHEECCCCCEECCCCCCCEEEHHHHHHHEEEEEECCEEEEEECCCCEEE MVDVTKMPENAFGYVPTPALVAPIEFTLRLSDYEELGGHMAEVRPVSSIALNDGLQTVGP EEEEEECCCCCCCCCCCCCEEECEEEEEEECCHHHHCCCHHHCCCHHHEEECCCCCCCCC HSDNPWPLAPNAAKRFFG CCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA