Click here to switch to the map view.

The map label for this gene is 86748207

Identifier: 86748207

GI number: 86748207

Start: 1241525

End: 1243033

Strand: Direct

Name: 86748207

Synonym: RPB_1082

Alternate gene names: NA

Gene position: 1241525-1243033 (Clockwise)

Preceding gene: 86748206

Following gene: 86748209

Centisome position: 23.29

GC content: 71.31

Gene sequence:

>1509_bases
ATGCGCTTCACCTCCCTGATCATCGAATTGATCCGCGCCCGGCCGCGGCTGATGTTCTGGCTGGTGGTGTCAGCGCAGGC
GCTGCTGTGGCTGGTGGTGCCGCTGCTGGTCTATGCCAGCCCGCCCGAGGGTGTCGCCACCGTGCTCGCCTACGGCCGCG
AATATCAGGTCGGCAGTGACCTCGGCCCGCCGCTGGCGTTCTGGCTCGCCGACATCGCCTTTCGCGCCGCGGGCGGCCAC
ATCGTCGGCGTCTATATCCTGGCGCAGCTCTGCTTCATCGTCACATTCTACGCTCTGTTCCAGCTCGCGCGCAGCATGGT
CGGCCCGCAGCACGCCGTGATCGCGGTGCTGCTGACCGCGACCATCACGGCGTTCGCGGAGCCCGGCGTCGCCTTCGGGC
CGCTGGTGCTGGCGCGGCCGCTGTGGGCGCTGGTGCTGTGGCACAGCTGGGAGATCATCGGCCGGGGTCGGCGCAGCGCC
TGGTTCGCGCTGTCGATCGAGGTCGGGCTTCTCCTGCTGACGACAGTTGCCGCGCCCGCGCTGTTGCTACTGCCGATCGG
CTTCGCGCTCGCGACCGCACGCAGCCGCCGCGCGCTGATGTCGTTCGATCCGCTGTTCGGCCTGCTGGTGATCGCGGTGC
TGGTGCTGCCCTATGGCATCTGGCTGGTCCGTGCCGATATCTTCGCGCTGCCACCGCTGCCGGCGTCCACTGAACTCGGT
GATCGTGCGATCCTCGCTGCCGAATTGTTCGGCGGCCTGCTGGTCGCGCTCGGTGGCGTTGCGCTGCTGGCGTTGCTCAA
CACCAGGTTCGATCGCGGGTCGGACGACGCGCCGGTGGTCTATCGGGCGCCGGTCGATCCGCTGGCGCGGCAGTTCGTGT
ATGTCTTCGCGCTGGCGCCAGCGCTGCTCGGCTGCATCGCCGCGGGCCTGTTCGGTCTGTCTCACGTCCTCGGCGGCGCC
GGCATCGCGCTGCTGCTGGTCGGGCTCGCGGTGGTGATGGCGACCGGGGACCTGATCCGCCTGCGCCGGCAACGCGTGCT
GCGCACCGCCTGGGCCGCGCTGGTGGCCGCACCGGCGGTGGCGGTGATCCTTGCTGCGGTGGTGCAGCCCTGGGCGAGCC
CCACTGAACGCGCGACGTCGCTGCCGGCCAGCGATATCGCCCGGTTCTTCGGCGAGAGCTTCGAGCGCCGCACCGGCCGG
CCGCTGCCGGCGGTGGCGGGCGATCCCGAACTCGCCGGACTGATCGCGATGGGCAGGTCGCGGCCGCATCTGTTTCTCGA
TGCGGCGCCGGCCCGCACGCCCTGGGTAACACCGGCGACGTTCAGCGAGCGCGGCGGCCTCGTGGTCTGGCGCGCCGCCG
ACACCGCCGGCAAGCCGCCGCCGGAGATCGCGCAGCGGTTTCCGGACATCGTGCCGGAGCTGCCGCGCGCGTTCGAGCGG
ATGATCGCCGGACGCCAGCCGCCGTTGCGGATCGGCTGGGCGATCGTGCGGCCGAAGGCGTCGCCGTAG

Upstream 100 bases:

>100_bases
CTGATTCCGGTCACGCAGCCACGCTGTAGGCGGGGCCAAGCCGGTTGCCTGGTGCGCCGGTGGCCTCTATCACGGGCGAA
CCGAACTCCGCTGGCCCCGC

Downstream 100 bases:

>100_bases
CTGTCGTCGCGATCAGTCCGCCGGCGACTCGCTTGCCGCGAGCGCCGTCGCGATCGCGCGAAGATCCTGCCACGCCAGCC
GCTTGTAGGTCGGCTGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MRFTSLIIELIRARPRLMFWLVVSAQALLWLVVPLLVYASPPEGVATVLAYGREYQVGSDLGPPLAFWLADIAFRAAGGH
IVGVYILAQLCFIVTFYALFQLARSMVGPQHAVIAVLLTATITAFAEPGVAFGPLVLARPLWALVLWHSWEIIGRGRRSA
WFALSIEVGLLLLTTVAAPALLLLPIGFALATARSRRALMSFDPLFGLLVIAVLVLPYGIWLVRADIFALPPLPASTELG
DRAILAAELFGGLLVALGGVALLALLNTRFDRGSDDAPVVYRAPVDPLARQFVYVFALAPALLGCIAAGLFGLSHVLGGA
GIALLLVGLAVVMATGDLIRLRRQRVLRTAWAALVAAPAVAVILAAVVQPWASPTERATSLPASDIARFFGESFERRTGR
PLPAVAGDPELAGLIAMGRSRPHLFLDAAPARTPWVTPATFSERGGLVVWRAADTAGKPPPEIAQRFPDIVPELPRAFER
MIAGRQPPLRIGWAIVRPKASP

Sequences:

>Translated_502_residues
MRFTSLIIELIRARPRLMFWLVVSAQALLWLVVPLLVYASPPEGVATVLAYGREYQVGSDLGPPLAFWLADIAFRAAGGH
IVGVYILAQLCFIVTFYALFQLARSMVGPQHAVIAVLLTATITAFAEPGVAFGPLVLARPLWALVLWHSWEIIGRGRRSA
WFALSIEVGLLLLTTVAAPALLLLPIGFALATARSRRALMSFDPLFGLLVIAVLVLPYGIWLVRADIFALPPLPASTELG
DRAILAAELFGGLLVALGGVALLALLNTRFDRGSDDAPVVYRAPVDPLARQFVYVFALAPALLGCIAAGLFGLSHVLGGA
GIALLLVGLAVVMATGDLIRLRRQRVLRTAWAALVAAPAVAVILAAVVQPWASPTERATSLPASDIARFFGESFERRTGR
PLPAVAGDPELAGLIAMGRSRPHLFLDAAPARTPWVTPATFSERGGLVVWRAADTAGKPPPEIAQRFPDIVPELPRAFER
MIAGRQPPLRIGWAIVRPKASP
>Mature_502_residues
MRFTSLIIELIRARPRLMFWLVVSAQALLWLVVPLLVYASPPEGVATVLAYGREYQVGSDLGPPLAFWLADIAFRAAGGH
IVGVYILAQLCFIVTFYALFQLARSMVGPQHAVIAVLLTATITAFAEPGVAFGPLVLARPLWALVLWHSWEIIGRGRRSA
WFALSIEVGLLLLTTVAAPALLLLPIGFALATARSRRALMSFDPLFGLLVIAVLVLPYGIWLVRADIFALPPLPASTELG
DRAILAAELFGGLLVALGGVALLALLNTRFDRGSDDAPVVYRAPVDPLARQFVYVFALAPALLGCIAAGLFGLSHVLGGA
GIALLLVGLAVVMATGDLIRLRRQRVLRTAWAALVAAPAVAVILAAVVQPWASPTERATSLPASDIARFFGESFERRTGR
PLPAVAGDPELAGLIAMGRSRPHLFLDAAPARTPWVTPATFSERGGLVVWRAADTAGKPPPEIAQRFPDIVPELPRAFER
MIAGRQPPLRIGWAIVRPKASP

Specific function: Unknown

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53737; Mature: 53737

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFTSLIIELIRARPRLMFWLVVSAQALLWLVVPLLVYASPPEGVATVLAYGREYQVGSD
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCC
LGPPLAFWLADIAFRAAGGHIVGVYILAQLCFIVTFYALFQLARSMVGPQHAVIAVLLTA
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
TITAFAEPGVAFGPLVLARPLWALVLWHSWEIIGRGRRSAWFALSIEVGLLLLTTVAAPA
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHH
LLLLPIGFALATARSRRALMSFDPLFGLLVIAVLVLPYGIWLVRADIFALPPLPASTELG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DRAILAAELFGGLLVALGGVALLALLNTRFDRGSDDAPVVYRAPVDPLARQFVYVFALAP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHH
ALLGCIAAGLFGLSHVLGGAGIALLLVGLAVVMATGDLIRLRRQRVLRTAWAALVAAPAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVILAAVVQPWASPTERATSLPASDIARFFGESFERRTGRPLPAVAGDPELAGLIAMGRS
HHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCC
RPHLFLDAAPARTPWVTPATFSERGGLVVWRAADTAGKPPPEIAQRFPDIVPELPRAFER
CCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHCHHHHHHHHHHHHH
MIAGRQPPLRIGWAIVRPKASP
HHCCCCCCCEECEEEECCCCCC
>Mature Secondary Structure
MRFTSLIIELIRARPRLMFWLVVSAQALLWLVVPLLVYASPPEGVATVLAYGREYQVGSD
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCC
LGPPLAFWLADIAFRAAGGHIVGVYILAQLCFIVTFYALFQLARSMVGPQHAVIAVLLTA
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
TITAFAEPGVAFGPLVLARPLWALVLWHSWEIIGRGRRSAWFALSIEVGLLLLTTVAAPA
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHH
LLLLPIGFALATARSRRALMSFDPLFGLLVIAVLVLPYGIWLVRADIFALPPLPASTELG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DRAILAAELFGGLLVALGGVALLALLNTRFDRGSDDAPVVYRAPVDPLARQFVYVFALAP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHH
ALLGCIAAGLFGLSHVLGGAGIALLLVGLAVVMATGDLIRLRRQRVLRTAWAALVAAPAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVILAAVVQPWASPTERATSLPASDIARFFGESFERRTGRPLPAVAGDPELAGLIAMGRS
HHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCC
RPHLFLDAAPARTPWVTPATFSERGGLVVWRAADTAGKPPPEIAQRFPDIVPELPRAFER
CCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHCHHHHHHHHHHHHH
MIAGRQPPLRIGWAIVRPKASP
HHCCCCCCCEECEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA