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The map label for this gene is ydiS [C]

Identifier: 86748209

GI number: 86748209

Start: 1244078

End: 1245736

Strand: Direct

Name: ydiS [C]

Synonym: RPB_1084

Alternate gene names: 86748209

Gene position: 1244078-1245736 (Clockwise)

Preceding gene: 86748207

Following gene: 86748210

Centisome position: 23.33

GC content: 64.98

Gene sequence:

>1659_bases
ATGAGCGATGAAACGCTGCCCCCCCGCGAATCGATGGAATTCGACGTTGTGATCGTGGGCGCGGGACCCTCGGGACTGGC
TTCCGCCATCCACCTGAAACAGATCAACCCCGAACTGTCGGTGGTCGTGGTCGAGAAAGGCTCCGAGGTCGGCGCGCACA
TCCTCTCCGGGGCGGTGATCGACGTCAGCGCGCTCGACAAGCTGATGCCGGGCTGGCGTGAGGACGAGACCTGTCCGCTC
AAGACCCATGTCGAGGACGATCATTTCTACGTCATGACGGCGGACAAGGCCTACAAGGTCCCGGGCATCATGGTCCCGCC
GATGCTCAACAACCACAAGAACTTCATCGGGTCGCTCGGCGATCTGTGCCGCTGGCTCGGCCCCAAGGCCGAAGAACTCG
GCGTCGAAATCTATCCCGGCTTCGCCGCCACCGAAGTGCTGTACGGCGACAACGGCGAAGTGCGCGGCATCGCCACCGGC
GACATGGGCATCGGCCGCGACGGTCAGCCCAAGGATTCGTTCACGCGCGGCATGGAGCTACTGGGCAAGTACACGCTGTT
CGCCGAGGGCGCGCGCGGCAGCCTGGCGAAGCAGCTGATCGCCAAGTACAAGCTCGACAAGGACAGCGACCCGCCGAAAT
TCGGCATCGGCCTGAAGGAAGTCTGGGAGATCGATCCGGCGAAACACCGCAAGGGCCGGATCGCGCATTCGTTCGGCTGG
CCGCTCAGCAACAATATCGGCGGCGGCTCGTTTCTTTATCACTACGGCACCAACCTCGTCGCGGTCGGCTTCGTCGTGCA
TCTCAACTACGACGATCCTTATCTGTCGCCGTTCGAGCAGTTCCAGAAATTCAAGACGCATCGCTCGGTGGCGCCGACCT
TCGAGGGCGGCAAGCGGATTTCCTACGGCGCGCGCGCCATCACCGAAGGCGGCTGGCAGTCGGTGCCGCGGCTGACCTTC
CCCGGCGGCGCGCTTGTCGGCTGCGCCGCGGGCTTCGTCAACGTGCCGCGCATCAAGGGCGTGCACAACGCGATCGGCAG
CGGCATGCTCGCCGCCGAGCACGTTGCCGCCGCACTCGCCGCGGGGCGCAGCAACGACGAGGTCAAGAGCTACGAGGAAT
CGTGGCGCGACTCCGCGATCGGCCGCGACCTGTTCAGGATCCGCAACGTCAAGCCGCTGTGGTCGAGGTTCGGCACCGCG
GTCGGCGTGGTGCTGGCCGGATTCGAGATGTGGTGTTCGACTCTCGGCTTCTCGGTGTTCGGCACCCTGTCGCACGGCAA
GCCGGACCGCTCGACGCTCGATCCCGCCAAGTCGCACGAGCGGCATCCGGCCGCGAAGCCGGACGGCAAGCTGACCTTCG
ACCGGCTGTCCTCGGTGTTCCTGTCGAACACCAATCACGAGGAAGACCAGCCGGTGCATCTGAAGGTCGCCGACATGGCC
CTGCAGAAGACGTCGGAGCACGACGTCTTCGCCGGACCGTCGGGGCGCTATTGCCCGGCGGCGGTGTACGAATGGGTCGA
GGAGCCGTCGGGTCCGCGCTTCGTGATCAACGCGCAGAACTGCGTCCACTGCAAAACCTGCGACATCAAGGATCCGAACG
GCAACATCACCTGGGTGCCTCCGGAAGGCGGCGGCGGCCCGAATTATCAGGGCATGTAA

Upstream 100 bases:

>100_bases
ACGATCGGGCAGCCGGTACATTTGGGAGGTTGTCCTTCGCGGAAAAATAAGAAAGAACACCGGCTGGAAACGTTCAAGAG
TGTCCCTGCGAGAAAATTAA

Downstream 100 bases:

>100_bases
GCCACGATGTCGTGAGCGCCGGCGCGCTGCGAGCGACGCGCCGGTCACGATGCTGCCATGTTGCCACCGTCTCAATCGGA
TCGAGGGCCGCGCCGCGACA

Product: electron-transferring-flavoprotein dehydrogenase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 552; Mature: 551

Protein sequence:

>552_residues
MSDETLPPRESMEFDVVIVGAGPSGLASAIHLKQINPELSVVVVEKGSEVGAHILSGAVIDVSALDKLMPGWREDETCPL
KTHVEDDHFYVMTADKAYKVPGIMVPPMLNNHKNFIGSLGDLCRWLGPKAEELGVEIYPGFAATEVLYGDNGEVRGIATG
DMGIGRDGQPKDSFTRGMELLGKYTLFAEGARGSLAKQLIAKYKLDKDSDPPKFGIGLKEVWEIDPAKHRKGRIAHSFGW
PLSNNIGGGSFLYHYGTNLVAVGFVVHLNYDDPYLSPFEQFQKFKTHRSVAPTFEGGKRISYGARAITEGGWQSVPRLTF
PGGALVGCAAGFVNVPRIKGVHNAIGSGMLAAEHVAAALAAGRSNDEVKSYEESWRDSAIGRDLFRIRNVKPLWSRFGTA
VGVVLAGFEMWCSTLGFSVFGTLSHGKPDRSTLDPAKSHERHPAAKPDGKLTFDRLSSVFLSNTNHEEDQPVHLKVADMA
LQKTSEHDVFAGPSGRYCPAAVYEWVEEPSGPRFVINAQNCVHCKTCDIKDPNGNITWVPPEGGGGPNYQGM

Sequences:

>Translated_552_residues
MSDETLPPRESMEFDVVIVGAGPSGLASAIHLKQINPELSVVVVEKGSEVGAHILSGAVIDVSALDKLMPGWREDETCPL
KTHVEDDHFYVMTADKAYKVPGIMVPPMLNNHKNFIGSLGDLCRWLGPKAEELGVEIYPGFAATEVLYGDNGEVRGIATG
DMGIGRDGQPKDSFTRGMELLGKYTLFAEGARGSLAKQLIAKYKLDKDSDPPKFGIGLKEVWEIDPAKHRKGRIAHSFGW
PLSNNIGGGSFLYHYGTNLVAVGFVVHLNYDDPYLSPFEQFQKFKTHRSVAPTFEGGKRISYGARAITEGGWQSVPRLTF
PGGALVGCAAGFVNVPRIKGVHNAIGSGMLAAEHVAAALAAGRSNDEVKSYEESWRDSAIGRDLFRIRNVKPLWSRFGTA
VGVVLAGFEMWCSTLGFSVFGTLSHGKPDRSTLDPAKSHERHPAAKPDGKLTFDRLSSVFLSNTNHEEDQPVHLKVADMA
LQKTSEHDVFAGPSGRYCPAAVYEWVEEPSGPRFVINAQNCVHCKTCDIKDPNGNITWVPPEGGGGPNYQGM
>Mature_551_residues
SDETLPPRESMEFDVVIVGAGPSGLASAIHLKQINPELSVVVVEKGSEVGAHILSGAVIDVSALDKLMPGWREDETCPLK
THVEDDHFYVMTADKAYKVPGIMVPPMLNNHKNFIGSLGDLCRWLGPKAEELGVEIYPGFAATEVLYGDNGEVRGIATGD
MGIGRDGQPKDSFTRGMELLGKYTLFAEGARGSLAKQLIAKYKLDKDSDPPKFGIGLKEVWEIDPAKHRKGRIAHSFGWP
LSNNIGGGSFLYHYGTNLVAVGFVVHLNYDDPYLSPFEQFQKFKTHRSVAPTFEGGKRISYGARAITEGGWQSVPRLTFP
GGALVGCAAGFVNVPRIKGVHNAIGSGMLAAEHVAAALAAGRSNDEVKSYEESWRDSAIGRDLFRIRNVKPLWSRFGTAV
GVVLAGFEMWCSTLGFSVFGTLSHGKPDRSTLDPAKSHERHPAAKPDGKLTFDRLSSVFLSNTNHEEDQPVHLKVADMAL
QKTSEHDVFAGPSGRYCPAAVYEWVEEPSGPRFVINAQNCVHCKTCDIKDPNGNITWVPPEGGGGPNYQGM

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=559, Percent_Identity=49.5527728085868, Blast_Score=532, Evalue=1e-151,
Organism=Escherichia coli, GI1787991, Length=394, Percent_Identity=26.1421319796954, Blast_Score=99, Evalue=7e-22,
Organism=Escherichia coli, GI1786227, Length=329, Percent_Identity=25.8358662613982, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI87082155, Length=374, Percent_Identity=24.8663101604278, Blast_Score=79, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI25144720, Length=564, Percent_Identity=49.645390070922, Blast_Score=529, Evalue=1e-150,
Organism=Saccharomyces cerevisiae, GI6324932, Length=576, Percent_Identity=42.8819444444444, Blast_Score=456, Evalue=1e-129,
Organism=Drosophila melanogaster, GI24652256, Length=553, Percent_Identity=52.4412296564195, Blast_Score=543, Evalue=1e-154,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 59905; Mature: 59774

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDETLPPRESMEFDVVIVGAGPSGLASAIHLKQINPELSVVVVEKGSEVGAHILSGAVI
CCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHEECCCCEEEEEEECCCCHHHHHHCCCEE
DVSALDKLMPGWREDETCPLKTHVEDDHFYVMTADKAYKVPGIMVPPMLNNHKNFIGSLG
EHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCEECCCCCCCHHHHHHHHH
DLCRWLGPKAEELGVEIYPGFAATEVLYGDNGEVRGIATGDMGIGRDGQPKDSFTRGMEL
HHHHHHCCCHHHCCEEEECCCEEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHH
LGKYTLFAEGARGSLAKQLIAKYKLDKDSDPPKFGIGLKEVWEIDPAKHRKGRIAHSFGW
HHHHHEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCHHCCCCEEEECCC
PLSNNIGGGSFLYHYGTNLVAVGFVVHLNYDDPYLSPFEQFQKFKTHRSVAPTFEGGKRI
CCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEE
SYGARAITEGGWQSVPRLTFPGGALVGCAAGFVNVPRIKGVHNAIGSGMLAAEHVAAALA
ECCCHHHCCCCCCCCCEEECCCCHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHH
AGRSNDEVKSYEESWRDSAIGRDLFRIRNVKPLWSRFGTAVGVVLAGFEMWCSTLGFSVF
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHE
GTLSHGKPDRSTLDPAKSHERHPAAKPDGKLTFDRLSSVFLSNTNHEEDQPVHLKVADMA
EECCCCCCCCCCCCCHHHHCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCEEEEEHHHH
LQKTSEHDVFAGPSGRYCPAAVYEWVEEPSGPRFVINAQNCVHCKTCDIKDPNGNITWVP
HHCCCCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCEEEEC
PEGGGGPNYQGM
CCCCCCCCCCCC
>Mature Secondary Structure 
SDETLPPRESMEFDVVIVGAGPSGLASAIHLKQINPELSVVVVEKGSEVGAHILSGAVI
CCCCCCCCCCCEEEEEEEECCCHHHHHHHHHEECCCCEEEEEEECCCCHHHHHHCCCEE
DVSALDKLMPGWREDETCPLKTHVEDDHFYVMTADKAYKVPGIMVPPMLNNHKNFIGSLG
EHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCEECCCCCCCHHHHHHHHH
DLCRWLGPKAEELGVEIYPGFAATEVLYGDNGEVRGIATGDMGIGRDGQPKDSFTRGMEL
HHHHHHCCCHHHCCEEEECCCEEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHH
LGKYTLFAEGARGSLAKQLIAKYKLDKDSDPPKFGIGLKEVWEIDPAKHRKGRIAHSFGW
HHHHHEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCHHCCCCEEEECCC
PLSNNIGGGSFLYHYGTNLVAVGFVVHLNYDDPYLSPFEQFQKFKTHRSVAPTFEGGKRI
CCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEE
SYGARAITEGGWQSVPRLTFPGGALVGCAAGFVNVPRIKGVHNAIGSGMLAAEHVAAALA
ECCCHHHCCCCCCCCCEEECCCCHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHH
AGRSNDEVKSYEESWRDSAIGRDLFRIRNVKPLWSRFGTAVGVVLAGFEMWCSTLGFSVF
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHE
GTLSHGKPDRSTLDPAKSHERHPAAKPDGKLTFDRLSSVFLSNTNHEEDQPVHLKVADMA
EECCCCCCCCCCCCCHHHHCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCEEEEEHHHH
LQKTSEHDVFAGPSGRYCPAAVYEWVEEPSGPRFVINAQNCVHCKTCDIKDPNGNITWVP
HHCCCCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCEEEEC
PEGGGGPNYQGM
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]