| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is catI [H]
Identifier: 86748201
GI number: 86748201
Start: 1235748
End: 1236566
Strand: Direct
Name: catI [H]
Synonym: RPB_1076
Alternate gene names: 86748201
Gene position: 1235748-1236566 (Clockwise)
Preceding gene: 86748200
Following gene: 86748202
Centisome position: 23.18
GC content: 68.62
Gene sequence:
>819_bases GTGGGAGAGATCGTTTCGCTGCAGCAACTGGCCGCGCAGGTGCGCGACGGCATGACGGTGGCGCTGTCGTCCGACAATGC CGGCGTCGCGATGGCCGCCACCGCCGCCATCCTCGCCAACCGCCCGAAAAATCTGCACCTCGTTTGCGTTCCGATCAGCG GCATGCAGGCCGACATGCTGATCGGCGAGGGGCTGGTCGGCACGCTCGAGACCAGCGCGGTGACGCTGGGTGAAGCCGGC GGCGCGCCGCGATTCGCCGACGGGATTCGCAACGGCGCGTTCAAGATGATGGATGCGACCTGCCCGGCGATTCTCGCCGG CCTCGTCGCCGGTCAGAAGGGCGTGCCGTTCATGCCGATCCGCGGCATCATCGGCAGCGACCTGCTGGCCTCGCGGCCGG ACTGGAAGGTGATCGACAATCCGTTCGCTGAGAACGACCCGATCGTCGTGGTGTCGGCGATCCGGCCCGACATCGCGCTG TTTCACGCCCCCGAGGCCGATCGCTTCGGCAATGTCCGGATCGGACGGCAGACCGAGCTCGCGGCGATGGCCTATGCGGC CAAGACCACGCTGGTGACGGTCGAGCGCATCGTCGAGACCTCGCTGCTCGCCGACGAACGCTCTGCGGCGGGCGTGTTGC CGGCGCTGTATGTCGGCGCGATCGCCGAGGCGAAGCACGGCGCCTGGCCGCTGGGCCTCGCCGGTGAATACGTCACCGAC TCGGCCGAAGTCGCACGCTACGCCAAGATGGCGCGCTCGGCCGACGGCTTCGCGGCCTACATGAAGGGCTTCGCGCAGGC ATTCGAGGCGGTGGCATGA
Upstream 100 bases:
>100_bases CATGCGTGGTGAGCGGCGCCGCGGCTTGACAGTTCCGCCGGCTCACGAAACCATCCGTCCCAACGACAGCCGCGACCACG CGGCGACGAGGGAGGATGCC
Downstream 100 bases:
>100_bases GCGCGCTGCCTGCGACGTCCCGCGAAATCCTGATCGCCACCATCGCCGATCTGCTCGACGGCGTCCGCACCGTCGCGGTC GGCGCGTCGTCGCCGATGCC
Product: coenzyme A transferase
Products: NA
Alternate protein names: 3-oxoadipate:succinyl-CoA transferase subunit A; Beta-ketoadipate:succinyl-CoA transferase subunit A [H]
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MGEIVSLQQLAAQVRDGMTVALSSDNAGVAMAATAAILANRPKNLHLVCVPISGMQADMLIGEGLVGTLETSAVTLGEAG GAPRFADGIRNGAFKMMDATCPAILAGLVAGQKGVPFMPIRGIIGSDLLASRPDWKVIDNPFAENDPIVVVSAIRPDIAL FHAPEADRFGNVRIGRQTELAAMAYAAKTTLVTVERIVETSLLADERSAAGVLPALYVGAIAEAKHGAWPLGLAGEYVTD SAEVARYAKMARSADGFAAYMKGFAQAFEAVA
Sequences:
>Translated_272_residues MGEIVSLQQLAAQVRDGMTVALSSDNAGVAMAATAAILANRPKNLHLVCVPISGMQADMLIGEGLVGTLETSAVTLGEAG GAPRFADGIRNGAFKMMDATCPAILAGLVAGQKGVPFMPIRGIIGSDLLASRPDWKVIDNPFAENDPIVVVSAIRPDIAL FHAPEADRFGNVRIGRQTELAAMAYAAKTTLVTVERIVETSLLADERSAAGVLPALYVGAIAEAKHGAWPLGLAGEYVTD SAEVARYAKMARSADGFAAYMKGFAQAFEAVA >Mature_271_residues GEIVSLQQLAAQVRDGMTVALSSDNAGVAMAATAAILANRPKNLHLVCVPISGMQADMLIGEGLVGTLETSAVTLGEAGG APRFADGIRNGAFKMMDATCPAILAGLVAGQKGVPFMPIRGIIGSDLLASRPDWKVIDNPFAENDPIVVVSAIRPDIALF HAPEADRFGNVRIGRQTELAAMAYAAKTTLVTVERIVETSLLADERSAAGVLPALYVGAIAEAKHGAWPLGLAGEYVTDS AEVARYAKMARSADGFAAYMKGFAQAFEAVA
Specific function: Catalyzes the CoA transfer from succinate to 3- oxoadipate (beta-ketoadipate) [H]
COG id: COG1788
COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 3-oxoacid CoA-transferase subunit A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004165 [H]
Pfam domain/function: PF01144 CoA_trans [H]
EC number: =2.8.3.6 [H]
Molecular weight: Translated: 28241; Mature: 28110
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEIVSLQQLAAQVRDGMTVALSSDNAGVAMAATAAILANRPKNLHLVCVPISGMQADML CCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHE IGEGLVGTLETSAVTLGEAGGAPRFADGIRNGAFKMMDATCPAILAGLVAGQKGVPFMPI ECCCCEEEECCCEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC RGIIGSDLLASRPDWKVIDNPFAENDPIVVVSAIRPDIALFHAPEADRFGNVRIGRQTEL CCHHCCHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCEEECCCHHH AAMAYAAKTTLVTVERIVETSLLADERSAAGVLPALYVGAIAEAKHGAWPLGLAGEYVTD HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHCC SAEVARYAKMARSADGFAAYMKGFAQAFEAVA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure GEIVSLQQLAAQVRDGMTVALSSDNAGVAMAATAAILANRPKNLHLVCVPISGMQADML CCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHE IGEGLVGTLETSAVTLGEAGGAPRFADGIRNGAFKMMDATCPAILAGLVAGQKGVPFMPI ECCCCEEEECCCEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC RGIIGSDLLASRPDWKVIDNPFAENDPIVVVSAIRPDIALFHAPEADRFGNVRIGRQTEL CCHHCCHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCEEECCCHHH AAMAYAAKTTLVTVERIVETSLLADERSAAGVLPALYVGAIAEAKHGAWPLGLAGEYVTD HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHCC SAEVARYAKMARSADGFAAYMKGFAQAFEAVA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11741863 [H]